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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0368000-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:14436127:14437395:-1 gene:Os03g0368000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 42 description:Similar to Peroxidase 1. (Os03t0368000-00)
Sequence

ATGGCAGCATCGGCCATGAAGCTCGCCATGGCGGTGGCGTGCGCGCTGGCGCTCGCGTCG
GCGTGCCACGGCCTGCAGCTGGGCTACTACAAGCAGTCGTGCCCCCGCGTGGAGGCCATC
GTGAGGGACGAGGTGAAGAAGTTCGTCTACAAGGACGCCGGCATCGGCGCCGGACTCATC
CGCCTCGTCTTCCACGACTGCTTCGTCGAGGGATGTGATGGCTCGGTGCTCCTGGACCCA
ACTCCGGCGAACCCGAAGCCGGAGAAGCTCAGCCCGCCCAACATGCCCAGCCTCCGCGGC
TTCGAGGTGATCGACGCCGCCAAGGACGCCGTCGAGAAGGTCTGCCCCGGCGTGGTCTCG
TGCGCCGACATCGTCGCCTTCGCCGCCCGCGACGCCGCCTACTTCCTCAGCAGATTCAGG
GTCAAGATCAACGTCCCAGGTGGACGCCTCGATGGCCGCCGCTCCCTCGACTCCGACGCC
CTCAACAACCTGCCGCCGCCCAACTTCAACGTGAACCAGCTCATCGGCGCGTTCGCCGCC
AAGGGCCTCGACGCCGAGGACATGGTGGTGCTCTCCGGCGCCCACACCGTCGGCCGCTCC
CACTGCTCCTCCTTCGTCTCGGACCGCGTCGCCGCGCCCTCCGACATCAACGGCGGCTTC
GCCAACTTCCTCAAGCAGAGGTGCCCGGCCAACCCGACCTCCAGCAACGACCCGACGGTG
AACCAGGACGCCGTCACGCCCAACGCGTTCGACAACCAGTACTACAAGAACGTGGTGGCG
CACAAGGTGCTCTTCGCGTCGGACGCGGCGCTGCTGACGTCGCCGGCGACGGCGAAGATG
GTGTCGGACAACGCCAACATCCCGGGGTGGTGGGAGGACAAGTTCGCCAAGGCGTTCGTC
AAGATGGCATCCGTCGGTGTCAAGACCGGCTACCCCGGCGAGATCAGGAGGCACTGCAGG
GTCGTCAACTAA

Peptide Sequence

PEP ID

Os03t0368000-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:14436127:14437395:-1 gene:Os03g0368000 transcript:Os03t0368000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 42 description:Similar to Peroxidase 1. (Os03t0368000-00)
Sequence

MAASAMKLAMAVACALALASACHGLQLGYYKQSCPRVEAIVRDEVKKFVYKDAGIGAGLI
RLVFHDCFVEGCDGSVLLDPTPANPKPEKLSPPNMPSLRGFEVIDAAKDAVEKVCPGVVS
CADIVAFAARDAAYFLSRFRVKINVPGGRLDGRRSLDSDALNNLPPPNFNVNQLIGAFAA
KGLDAEDMVVLSGAHTVGRSHCSSFVSDRVAAPSDINGGFANFLKQRCPANPTSSNDPTV
NQDAVTPNAFDNQYYKNVVAHKVLFASDAALLTSPATAKMVSDNANIPGWWEDKFAKAFV
KMASVGVKTGYPGEIRRHCRVVN

Transcript Sequence

Transcript ID

Os03t0368000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:14436127:14437395:-1 gene:Os03g0368000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 42 description:Similar to Peroxidase 1. (Os03t0368000-00)
Sequence

CAATGGCAGCATCGGCCATGAAGCTCGCCATGGCGGTGGCGTGCGCGCTGGCGCTCGCGT
CGGCGTGCCACGGCCTGCAGCTGGGCTACTACAAGCAGTCGTGCCCCCGCGTGGAGGCCA
TCGTGAGGGACGAGGTGAAGAAGTTCGTCTACAAGGACGCCGGCATCGGCGCCGGACTCA
TCCGCCTCGTCTTCCACGACTGCTTCGTCGAGGGATGTGATGGCTCGGTGCTCCTGGACC
CAACTCCGGCGAACCCGAAGCCGGAGAAGCTCAGCCCGCCCAACATGCCCAGCCTCCGCG
GCTTCGAGGTGATCGACGCCGCCAAGGACGCCGTCGAGAAGGTCTGCCCCGGCGTGGTCT
CGTGCGCCGACATCGTCGCCTTCGCCGCCCGCGACGCCGCCTACTTCCTCAGCAGATTCA
GGGTCAAGATCAACGTCCCAGGTGGACGCCTCGATGGCCGCCGCTCCCTCGACTCCGACG
CCCTCAACAACCTGCCGCCGCCCAACTTCAACGTGAACCAGCTCATCGGCGCGTTCGCCG
CCAAGGGCCTCGACGCCGAGGACATGGTGGTGCTCTCCGGCGCCCACACCGTCGGCCGCT
CCCACTGCTCCTCCTTCGTCTCGGACCGCGTCGCCGCGCCCTCCGACATCAACGGCGGCT
TCGCCAACTTCCTCAAGCAGAGGTGCCCGGCCAACCCGACCTCCAGCAACGACCCGACGG
TGAACCAGGACGCCGTCACGCCCAACGCGTTCGACAACCAGTACTACAAGAACGTGGTGG
CGCACAAGGTGCTCTTCGCGTCGGACGCGGCGCTGCTGACGTCGCCGGCGACGGCGAAGA
TGGTGTCGGACAACGCCAACATCCCGGGGTGGTGGGAGGACAAGTTCGCCAAGGCGTTCG
TCAAGATGGCATCCGTCGGTGTCAAGACCGGCTACCCCGGCGAGATCAGGAGGCACTGCA
GGGTCGTCAACTAATCATCTATATATTGAATTCAACGTGTGTTCCATCAAATTTTCTCAT
TGCTACGTTTTGTTTTTGTATTTATTCGTTCATTCTTTTGTGTAGTGTATTTTGTGTTGA
TTATTATATATGTCCTCTCCTATTATGTAATTGTGTAATATGACACTTTATCATGTAATA
ACATTGGAATATATTTTTG