Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0367900-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:14431771:14435156:1 gene:Os03g0367900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C15, pyroglutamyl peptidase I family protein. (Os03t0367900-01);Peptidase C15, pyroglutamyl peptidase I family protein. (Os03t0367900-02)
Sequence

ATGGGTTCTGAAGGACCTTCTGGTGTTACCGTTCACGTTACTGGATTCAAGAAGTTCCAT
GGAGTCGCTGAGAATCCGACGGAGAAGATTGTGCGCAATCTTGAGTCATTTATGGAAAAG
AGAGGGTTGCCTAAAGGTTTAACACTTGGAAGTTGCACTGTTCTTGAGACTGCTGGGCAG
GGTGGGCTTGGTCCGTTGTATGAAGTGTTTGAATCAGCCATCGTAGACAAAGAGTATGGG
TTGAATGATCAGGGGCAAGTGATTCTGCTCCATTTTGGAGTCAACAGTGGCACAACAAGG
TTTGCCCTTGAGAATCAAGCTATTAATGAAGCTACCTTCCGTTGCCCTGATGAGCTGGGA
TGGAAACCACAGAGGGCCCCTATTGTGTCATCTGATGGAAGCATCTCAAATTTAAGAAAG
ACCACTGTGCCTGTGAATGAAGTGAACAAGTCCCTACAACAGATGGGCTTCGATGTGGCG
CCTTCGGATGACGCTGGTCGATTCGTATGCAACTATGTCTATTACCAATCTCTTAGGTTC
GCAGAACAGCGCGGTATCAAGTCTTTGTTCGTCCATTTCCCCCTCTTCACGACGATTAGT
GAGGAAGTTCAGATGAACTTCGTCGCAACCCTCCTCGAAGTTCTTGCTTCCCAGAACTAT
GCACAGTAA

Peptide Sequence

PEP ID

Os03t0367900-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:14431771:14435156:1 gene:Os03g0367900 transcript:Os03t0367900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C15, pyroglutamyl peptidase I family protein. (Os03t0367900-01);Peptidase C15, pyroglutamyl peptidase I family protein. (Os03t0367900-02)
Sequence

MGSEGPSGVTVHVTGFKKFHGVAENPTEKIVRNLESFMEKRGLPKGLTLGSCTVLETAGQ
GGLGPLYEVFESAIVDKEYGLNDQGQVILLHFGVNSGTTRFALENQAINEATFRCPDELG
WKPQRAPIVSSDGSISNLRKTTVPVNEVNKSLQQMGFDVAPSDDAGRFVCNYVYYQSLRF
AEQRGIKSLFVHFPLFTTISEEVQMNFVATLLEVLASQNYAQ

Transcript Sequence

Transcript ID

Os03t0367900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:14431771:14435156:1 gene:Os03g0367900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C15, pyroglutamyl peptidase I family protein. (Os03t0367900-01);Peptidase C15, pyroglutamyl peptidase I family protein. (Os03t0367900-02)
Sequence

AATCGTCTCTCTCGGCCGATGAGGTAAGCCGCCTCGCCGCGGCGATCGATCCCATTTCAG
ATTGCGCCTTTAAGAAGGAGGAGGATGGACAGTTGCTAACCTCACCTCACCTCGCTTTCG
ATTTCTCCGGTCTTCTCTTCTCTTCCGTTCCATCCACTTTCTTCTTCTGCTGGAGCGCGC
AAAGGAGCTTGCTTTGCTTCCGCCGTCGCCGTGGTTGCCGCGCCAAGATTGTGTGACTGC
ATATTTTCCTTGGTCAACTTTGTTTCATAACCGGATAGATGGGTTCTGAAGGACCTTCTG
GTGTTACCGTTCACGTTACTGGATTCAAGAAGTTCCATGGAGTCGCTGAGAATCCGACGG
AGAAGATTGTGCGCAATCTTGAGTCATTTATGGAAAAGAGAGGGTTGCCTAAAGGTTTAA
CACTTGGAAGTTGCACTGTTCTTGAGACTGCTGGGCAGGGTGGGCTTGGTCCGTTGTATG
AAGTGTTTGAATCAGCCATCGTAGACAAAGAGTATGGGTTGAATGATCAGGGGCAAGTGA
TTCTGCTCCATTTTGGAGTCAACAGTGGCACAACAAGGTTTGCCCTTGAGAATCAAGCTA
TTAATGAAGCTACCTTCCGTTGCCCTGATGAGCTGGGATGGAAACCACAGAGGGCCCCTA
TTGTGTCATCTGATGGAAGCATCTCAAATTTAAGAAAGACCACTGTGCCTGTGAATGAAG
TGAACAAGTCCCTACAACAGATGGGCTTCGATGTGGCGCCTTCGGATGACGCTGGTCGAT
TCGTATGCAACTATGTCTATTACCAATCTCTTAGGTTCGCAGAACAGCGCGGTATCAAGT
CTTTGTTCGTCCATTTCCCCCTCTTCACGACGATTAGTGAGGAAGTTCAGATGAACTTCG
TCGCAACCCTCCTCGAAGTTCTTGCTTCCCAGAACTATGCACAGTAACCTGATGGGGGGC
AGGGTCTACTTCCTAAGGTTTCTTCTTCCAATTTTATTAGGAAGTTGCCAAGTGACAAAA
CCTCTCTAGTGCTCTGTTTGCTGTCCGACTGTAGGCCGTCGTCGCCTTTTGCTGTGAAGA
TGAAGTGGAGTGAATAAGATTGTAAAATCATTCATGACATTGCCTGTGCTCCAAATTGTG
TATAAAAAAAGGCTGGTTAGAGCT