Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0366200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:14321293:14323202:1 gene:Os03g0366200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDPK-RELATED KINASE 1 description:Similar to Calcium/calmodulin-dependent serine/threonine-protein kinase 1. (Os03t0366200-01)
Sequence

ATTGTCGGAAGTGCATATTATGTTGCTCCTGAAGTGCTCCATCGATCTTATGGCACTGAG
GCAGATATGTGGAGCATTGGAGTAATAGTGTATATTTTGCTTTGTGGCAGCCGTCCTTTC
TGGGCACGTACTGAGTCAGGAATATTCCGAGCTGTGCTGAAAGCAGACCCTAGTTTTGAG
GAAGCCCCATGGCCAACCCTCTCTGCTGAAGCAAAAGACTTTGTAAGGAGGCTGCTCAAT
AAAGATTACCGCAAGAGGATGACTGCTGCACAAGCCCTCTGTCATCCATGGATTCGTGGT
ACTGAAGAAGTGAAGCTTCCTTTGGACATGATAATTTATAGGCTTATGAGGGCTTACATA
AGTTCATCTTCTTTACGGAGAGCTGCATTGAGGGCCCTTGCCAAGACATTGACAACAGAT
CAAATCTATTACCTAAGAGAACAGTTTGAATTGATAGGCCCAAACAAGAGCGATCTTATT
ACTTTGCAAAATTTGAAGACGGCCTTGATGAAGAACTCCACAAATGCAATGAAGGATTCT
AGGGTGGTTGACTTTGTTAACACAATATCCAATATTCAGTACAGAAAGTTGGATTTTGAG
GAGTTTTCTGCTGCTGCCATCAGTGTTTACCAGATGGAAGGTTTGGAAACCTGGGAACAA
CATGCCCGGCAAGCGTACGAGTTCTTTGATAAGGAGGGTAACCGACCAATTGTGATCGAC
GAGCTCGCATCGGAACTTGGATTGGGTCCTTCGGTTCCCCTACATGTTGTTCTCCAAGAT
TGGATCAGACATCCTGATGGAAAACTCAGCTTCCTTGGGTTCATGAAACTATTGCATGGA
GTTTCTTCGCGTACCATCCCAAAAACCTGA

Peptide Sequence

PEP ID

Os03t0366200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:14321293:14323202:1 gene:Os03g0366200 transcript:Os03t0366200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDPK-RELATED KINASE 1 description:Similar to Calcium/calmodulin-dependent serine/threonine-protein kinase 1. (Os03t0366200-01)
Sequence

IVGSAYYVAPEVLHRSYGTEADMWSIGVIVYILLCGSRPFWARTESGIFRAVLKADPSFE
EAPWPTLSAEAKDFVRRLLNKDYRKRMTAAQALCHPWIRGTEEVKLPLDMIIYRLMRAYI
SSSSLRRAALRALAKTLTTDQIYYLREQFELIGPNKSDLITLQNLKTALMKNSTNAMKDS
RVVDFVNTISNIQYRKLDFEEFSAAAISVYQMEGLETWEQHARQAYEFFDKEGNRPIVID
ELASELGLGPSVPLHVVLQDWIRHPDGKLSFLGFMKLLHGVSSRTIPKT

Transcript Sequence

Transcript ID

Os03t0366200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:14321293:14323202:1 gene:Os03g0366200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDPK-RELATED KINASE 1 description:Similar to Calcium/calmodulin-dependent serine/threonine-protein kinase 1. (Os03t0366200-01)
Sequence

ATTGTCGGAAGTGCATATTATGTTGCTCCTGAAGTGCTCCATCGATCTTATGGCACTGAG
GCAGATATGTGGAGCATTGGAGTAATAGTGTATATTTTGCTTTGTGGCAGCCGTCCTTTC
TGGGCACGTACTGAGTCAGGAATATTCCGAGCTGTGCTGAAAGCAGACCCTAGTTTTGAG
GAAGCCCCATGGCCAACCCTCTCTGCTGAAGCAAAAGACTTTGTAAGGAGGCTGCTCAAT
AAAGATTACCGCAAGAGGATGACTGCTGCACAAGCCCTCTGTCATCCATGGATTCGTGGT
ACTGAAGAAGTGAAGCTTCCTTTGGACATGATAATTTATAGGCTTATGAGGGCTTACATA
AGTTCATCTTCTTTACGGAGAGCTGCATTGAGGGCCCTTGCCAAGACATTGACAACAGAT
CAAATCTATTACCTAAGAGAACAGTTTGAATTGATAGGCCCAAACAAGAGCGATCTTATT
ACTTTGCAAAATTTGAAGACGGCCTTGATGAAGAACTCCACAAATGCAATGAAGGATTCT
AGGGTGGTTGACTTTGTTAACACAATATCCAATATTCAGTACAGAAAGTTGGATTTTGAG
GAGTTTTCTGCTGCTGCCATCAGTGTTTACCAGATGGAAGGTTTGGAAACCTGGGAACAA
CATGCCCGGCAAGCGTACGAGTTCTTTGATAAGGAGGGTAACCGACCAATTGTGATCGAC
GAGCTCGCATCGGAACTTGGATTGGGTCCTTCGGTTCCCCTACATGTTGTTCTCCAAGAT
TGGATCAGACATCCTGATGGAAAACTCAGCTTCCTTGGGTTCATGAAACTATTGCATGGA
GTTTCTTCGCGTACCATCCCAAAAACCTGAGATAATAACTTATTTTCTTACATCAACCAA
GGCAAAAGTGTGATGACTAAACTAATCTCTGGCTGTCTGGAGAAGCGGCATGGAACCAGT
ACAAAGATTAACAAAGCTGTCCTAGTGTAACAAGTGAAAAAGCTCTCCTGTCAGGCCCGC
GAATTTCGCCTTCTCTTACCAGATGATTGATGTTGTGTTTGTATTCAGGTTTGTTTAGAG
GTGAATGTACAGATGAGTTTAGGAAACAGGAAAAATGAGGTGCTAAGAAAGTGAAACATG
GTTTAATTT