Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0363900-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:14183674:14187817:1 gene:Os03g0363900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, DHHC-type domain containing protein. (Os03t0363900-01);Zinc finger, DHHC-type domain containing protein. (Os03t0363900-02)
Sequence

ATGGACGTGCCGTGGCTGCTGGTGGCGCACGGGTCGGTGACGGCGCTGGTGGTGGTGTCC
TTCCTCTGCGGGCAGTGGCCCATCTTCGAGGGCACCTTCGTGCAGCGCATCAACCACTTC
CTCACCTTCGGCGCCTACCACCACCTCCTGCGGCTCGTCCACGCGGCGTGCGGCAATGGG
GCCAGGGATCTCGTCCTCGGCGTCGAGAGCTACTGCTGCGACCGGCCCAACCCGATCCTG
CAGATTTTTTACGTTGCCATAATAGGGGTAACATATTTTATAATCGTCCAGACATCTTTC
CAGTACATTCCTGGGTACTATGTGAGTGGACTGCACAGATACCTGAGTATCGTGGCTGTT
GCTATTGGTGCTTTACTCTTCGTGCTGACTAGCTTTTCTGATCCTGGAACTGTCACTGCT
GAGAATGTTTCTCAATATCTATCTGCCTATCCATATGATGGCATCATTTTTGAGGAGAAA
GAGTGTTCTACCTGCAAGATTGCCAGGCCAGCCAGGGCAAAGCACTGTAGAATATGTGAT
AAATGTGTTGCACGGTTTGATCACCACTGTGGATGGATGAATAACTGCATTGGGGAGAAA
AATACTCGCTATTTTGTGGCCTTTTTAGTTTGGCATTTCCTTATATGTCTGTACGGAGCG
GTTATTCTTGGTTTCATTCTTGCTGGTGAATTAAAAGAAAGGAAAGTTGTCTACATATTG
ACAGTTTATTATGGCATCGACAATTCATTCTCTGGGCTATTTCCACATGTTGCACAGTGG
CTGCTTGCTGTGCATAACACACAGATACTCTTAGCGGTCTTTTTGGCTATAATTGCATTG
CTCCTTGGTGGGTTTTGTGCTTACCACACACATCTTTGCTTAACAAATACAACAACGAAT
GAGACATTCAAATGGCAAGACTATATTATGTGGAGGAAAAAGGTGAACGAGGAAAAGGCT
GCTGCAAATGGTGAAGTGCGCAAATCGCCACCAAGCAAATGGAAGGCGTTTTTCTCTAGA
TCACATACTGAGGCCGATGAAACAATTGTGAAAAATAACATATATGACAGAGGCATGATT
AGAAACATGTGCGAGGTGTTTGTCCCTTTGTCAGAACGGCAGTCATTTTCCCGCAAGAAA
TCTGATTGA

Peptide Sequence

PEP ID

Os03t0363900-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:14183674:14187817:1 gene:Os03g0363900 transcript:Os03t0363900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, DHHC-type domain containing protein. (Os03t0363900-01);Zinc finger, DHHC-type domain containing protein. (Os03t0363900-02)
Sequence

MDVPWLLVAHGSVTALVVVSFLCGQWPIFEGTFVQRINHFLTFGAYHHLLRLVHAACGNG
ARDLVLGVESYCCDRPNPILQIFYVAIIGVTYFIIVQTSFQYIPGYYVSGLHRYLSIVAV
AIGALLFVLTSFSDPGTVTAENVSQYLSAYPYDGIIFEEKECSTCKIARPARAKHCRICD
KCVARFDHHCGWMNNCIGEKNTRYFVAFLVWHFLICLYGAVILGFILAGELKERKVVYIL
TVYYGIDNSFSGLFPHVAQWLLAVHNTQILLAVFLAIIALLLGGFCAYHTHLCLTNTTTN
ETFKWQDYIMWRKKVNEEKAAANGEVRKSPPSKWKAFFSRSHTEADETIVKNNIYDRGMI
RNMCEVFVPLSERQSFSRKKSD

Transcript Sequence

Transcript ID

Os03t0363900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:14183674:14187817:1 gene:Os03g0363900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, DHHC-type domain containing protein. (Os03t0363900-01);Zinc finger, DHHC-type domain containing protein. (Os03t0363900-02)
Sequence

ACTTTGCTTCGCTTGGGTTTCATCGTCGTCCCCTCCTCCTCCTTCCTTTGACCTCGGCTC
GATCGACCATCCCGCGGAGGAGACGACGCCGCGGCGGCGGCGGAGGACTCGCCGGCGGCG
GGGATGGACGTGCCGTGGCTGCTGGTGGCGCACGGGTCGGTGACGGCGCTGGTGGTGGTG
TCCTTCCTCTGCGGGCAGTGGCCCATCTTCGAGGGCACCTTCGTGCAGCGCATCAACCAC
TTCCTCACCTTCGGCGCCTACCACCACCTCCTGCGGCTCGTCCACGCGGCGTGCGGCAAT
GGGGCCAGGGATCTCGTCCTCGGCGTCGAGAGCTACTGCTGCGACCGGCCCAACCCGATC
CTGCAGATTTTTTACGTTGCCATAATAGGGGTAACATATTTTATAATCGTCCAGACATCT
TTCCAGTACATTCCTGGGTACTATGTGAGTGGACTGCACAGATACCTGAGTATCGTGGCT
GTTGCTATTGGTGCTTTACTCTTCGTGCTGACTAGCTTTTCTGATCCTGGAACTGTCACT
GCTGAGAATGTTTCTCAATATCTATCTGCCTATCCATATGATGGCATCATTTTTGAGGAG
AAAGAGTGTTCTACCTGCAAGATTGCCAGGCCAGCCAGGGCAAAGCACTGTAGAATATGT
GATAAATGTGTTGCACGGTTTGATCACCACTGTGGATGGATGAATAACTGCATTGGGGAG
AAAAATACTCGCTATTTTGTGGCCTTTTTAGTTTGGCATTTCCTTATATGTCTGTACGGA
GCGGTTATTCTTGGTTTCATTCTTGCTGGTGAATTAAAAGAAAGGAAAGTTGTCTACATA
TTGACAGTTTATTATGGCATCGACAATTCATTCTCTGGGCTATTTCCACATGTTGCACAG
TGGCTGCTTGCTGTGCATAACACACAGATACTCTTAGCGGTCTTTTTGGCTATAATTGCA
TTGCTCCTTGGTGGGTTTTGTGCTTACCACACACATCTTTGCTTAACAAATACAACAACG
AATGAGACATTCAAATGGCAAGACTATATTATGTGGAGGAAAAAGGTGAACGAGGAAAAG
GCTGCTGCAAATGGTGAAGTGCGCAAATCGCCACCAAGCAAATGGAAGGCGTTTTTCTCT
AGATCACATACTGAGGCCGATGAAACAATTGTGAAAAATAACATATATGACAGAGGCATG
ATTAGAAACATGTGCGAGGTGTTTGTCCCTTTGTCAGAACGGCAGTCATTTTCCCGCAAG
AAATCTGATTGATCTGAATGCTGTTGCAGCTTTGC