Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0359000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:13927615:13932835:-1 gene:Os03g0359000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Prolyl Oligopeptidase 8, PROLYL OLIGOPEPTIDASE 8 description:Ubiquitin interacting motif domain containing protein. (Os03t0359000-01)
Sequence

CTGAAAGCTGTTGTCAATCATTTGCGGACAGATGGGAACATATCTTGTATTGGTCTGTGG
GGCCGCTCAATGGGTGCAGTAACAAGTCTGATGTATGGAGCAGAGGATCCATCAATTGCT
GGAATGGTTCTTGACAGTCCATTTTCTAACCTGGTTGACTTGATGATGGAACTAGTGGAT
ACATATAAATATCCACTACCAAAATTCACGGTGAAACTAGCAATACAACATATGCGAAAG
GTTGTCAAGAGAAAAGCCAGCTTTGACATCATGGAACTTGATACCATTCAGGTAGCAAAG
CGGTGCTTTGTTCCTGCTTTGTTTGGACATGCGACTGAAGATGATTTTATACTGCCCCAT
CATTCAGACAAAATCTATGAATCCTATGTTGGAGACAAAAACATTATTAAATTCGATGGG
GATCACAATTCACCCCGTCCACAATTTTACTTTGATTCCATAACAATATTTTTCCATAAT
GTGCTAAACCCTCCTGATGTTCCTGATGACCATTATTTCCTGACACCTCATGGAAGCCTT
GGTCAGGGTCATTGGGATACAGAACATGACATAGAGTATAGGTTCGCTCAATCACCAACA
GCCCGCACAGCTACCACAGAAGATGCCATTGCGCAGTTACGTTCTAGAAGGCTCATGAGT
AGAATGGAGGTCCCAACTGGTGCCACTGCAGAAGACAGGGCTGACAGAAATGAGGTAATG
GACAGTGATAATGGTCCTTCCTCTTCTAGTGTATCTACTGCAACTCCTCCTAATGGCCGC
AATGGAAGGCTCCTGACTCCAACCTCTGATGATGGCGAGTATGTGGAGTACTCATTTGAT
AGTCTATCAGATATGCCCTACACTGAGGAAGATGAGGATAGAATGCTAATGCAAGCAATT
ATGGAGTCCTTGAAGGATCTTGAACTGTCAAATACAAAAGCTGCGCAATCTGCCGCATCT
GATGCTGCATCCAAAGAAAATAAAGAAAATGGTTGCAATGGTGCAACCGTGACAGTATTG
GAGCCAGATGCATCTTCCACCTCGGCGCGTCCCACTCCCACAGATGCTCCTGGCAAGGAT
GTAACAACCTGCAGTACTAAAGCAAAGTCACCTGAAGTGCAAAGTGCAAGCAACCACACC
ACAAACAACGCCGCTTCTGTGAACACCTCTAGTTCCTTAGAGTCCAATGCATCAACCCAT
GTTACGAACGGAAAATCCACCTCGTCGGAATCTCAGAAACCAACACAGAACGCCAATGGG
GAGGATGGTACAAGAGCAACCCTGGTGGTACAGAAGAGCCGGACAGGCAGCCTAATGGAT
GGACTGACGCACAAATGGGGTTCCTTGTTCAAGAACAATGACTAA

Peptide Sequence

PEP ID

Os03t0359000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:13927615:13932835:-1 gene:Os03g0359000 transcript:Os03t0359000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Prolyl Oligopeptidase 8, PROLYL OLIGOPEPTIDASE 8 description:Ubiquitin interacting motif domain containing protein. (Os03t0359000-01)
Sequence

LKAVVNHLRTDGNISCIGLWGRSMGAVTSLMYGAEDPSIAGMVLDSPFSNLVDLMMELVD
TYKYPLPKFTVKLAIQHMRKVVKRKASFDIMELDTIQVAKRCFVPALFGHATEDDFILPH
HSDKIYESYVGDKNIIKFDGDHNSPRPQFYFDSITIFFHNVLNPPDVPDDHYFLTPHGSL
GQGHWDTEHDIEYRFAQSPTARTATTEDAIAQLRSRRLMSRMEVPTGATAEDRADRNEVM
DSDNGPSSSSVSTATPPNGRNGRLLTPTSDDGEYVEYSFDSLSDMPYTEEDEDRMLMQAI
MESLKDLELSNTKAAQSAASDAASKENKENGCNGATVTVLEPDASSTSARPTPTDAPGKD
VTTCSTKAKSPEVQSASNHTTNNAASVNTSSSLESNASTHVTNGKSTSSESQKPTQNANG
EDGTRATLVVQKSRTGSLMDGLTHKWGSLFKNND

Transcript Sequence

Transcript ID

Os03t0359000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:13927615:13932835:-1 gene:Os03g0359000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Prolyl Oligopeptidase 8, PROLYL OLIGOPEPTIDASE 8 description:Ubiquitin interacting motif domain containing protein. (Os03t0359000-01)
Sequence

TCTGAAAGCTGTTGTCAATCATTTGCGGACAGATGGGAACATATCTTGTATTGGTCTGTG
GGGCCGCTCAATGGGTGCAGTAACAAGTCTGATGTATGGAGCAGAGGATCCATCAATTGC
TGGAATGGTTCTTGACAGTCCATTTTCTAACCTGGTTGACTTGATGATGGAACTAGTGGA
TACATATAAATATCCACTACCAAAATTCACGGTGAAACTAGCAATACAACATATGCGAAA
GGTTGTCAAGAGAAAAGCCAGCTTTGACATCATGGAACTTGATACCATTCAGGTAGCAAA
GCGGTGCTTTGTTCCTGCTTTGTTTGGACATGCGACTGAAGATGATTTTATACTGCCCCA
TCATTCAGACAAAATCTATGAATCCTATGTTGGAGACAAAAACATTATTAAATTCGATGG
GGATCACAATTCACCCCGTCCACAATTTTACTTTGATTCCATAACAATATTTTTCCATAA
TGTGCTAAACCCTCCTGATGTTCCTGATGACCATTATTTCCTGACACCTCATGGAAGCCT
TGGTCAGGGTCATTGGGATACAGAACATGACATAGAGTATAGGTTCGCTCAATCACCAAC
AGCCCGCACAGCTACCACAGAAGATGCCATTGCGCAGTTACGTTCTAGAAGGCTCATGAG
TAGAATGGAGGTCCCAACTGGTGCCACTGCAGAAGACAGGGCTGACAGAAATGAGGTAAT
GGACAGTGATAATGGTCCTTCCTCTTCTAGTGTATCTACTGCAACTCCTCCTAATGGCCG
CAATGGAAGGCTCCTGACTCCAACCTCTGATGATGGCGAGTATGTGGAGTACTCATTTGA
TAGTCTATCAGATATGCCCTACACTGAGGAAGATGAGGATAGAATGCTAATGCAAGCAAT
TATGGAGTCCTTGAAGGATCTTGAACTGTCAAATACAAAAGCTGCGCAATCTGCCGCATC
TGATGCTGCATCCAAAGAAAATAAAGAAAATGGTTGCAATGGTGCAACCGTGACAGTATT
GGAGCCAGATGCATCTTCCACCTCGGCGCGTCCCACTCCCACAGATGCTCCTGGCAAGGA
TGTAACAACCTGCAGTACTAAAGCAAAGTCACCTGAAGTGCAAAGTGCAAGCAACCACAC
CACAAACAACGCCGCTTCTGTGAACACCTCTAGTTCCTTAGAGTCCAATGCATCAACCCA
TGTTACGAACGGAAAATCCACCTCGTCGGAATCTCAGAAACCAACACAGAACGCCAATGG
GGAGGATGGTACAAGAGCAACCCTGGTGGTACAGAAGAGCCGGACAGGCAGCCTAATGGA
TGGACTGACGCACAAATGGGGTTCCTTGTTCAAGAACAATGACTAAGACAAGCAAAAGAT
ATACGATGACGCCCGTTGACGATTTATGTTATTGTGTGTTAATATAGCCATAGAGCTGCC
GCCTCTGGCCGCACATGTCCAGCTTGATTGGTTTAATTTACGTGTAAAATGAGAAAGGAA
AAAGGGATATACTGTACAAGTGGTGTATATATACAGCTAGGATGGTAGTGATCCCATTGA
TTGTGTACC