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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0358100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:13879058:13882301:1 gene:Os03g0358100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE description:Similar to Glutathione peroxidase. (Os03t0358100-01)
Sequence

ATGGGGGCGGCGGAATCCGTGCCGGAGACCTCCATACACGAATTCACCGTCAAGGATTGC
AACGGCAAGGAGGTGAGCCTGGAGATGTACAAGGGGAAGGTGCTAATCGTCGTCAACGTC
GCCTCCAAATGTGGGTTCACGGAGACCAACTACACGCAGCTGACGGAGCTCTATCAGAAA
CACAGGGACAAAGATTTTGAGATTCTAGCATTTCCCTGCAATCAGTTCTTGCGACAAGAG
CCAGGATCTGACCAGCAAATAAAGGATTTTGCTTGCACAAGATTTAAAGCTGAATATCCC
GTTTTTCAGAAGGTGCGTGTAAATGGTCCTGATGCTGCACCACTTTACAAATTTTTGAAA
GCTAGCAAGCCTGGCTTGTTTGGATCTAGAATCAAGTGGAACTTTACCAAATTTCTTATT
GATAAGAATGGCAAAGTCATTAACAGATACTCGACTGCGACCAGTCCCTTGTCTTTTGAG
AAAGACATCCTGAAGGCGCTCGAGGATTAG

Peptide Sequence

PEP ID

Os03t0358100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:13879058:13882301:1 gene:Os03g0358100 transcript:Os03t0358100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE description:Similar to Glutathione peroxidase. (Os03t0358100-01)
Sequence

MGAAESVPETSIHEFTVKDCNGKEVSLEMYKGKVLIVVNVASKCGFTETNYTQLTELYQK
HRDKDFEILAFPCNQFLRQEPGSDQQIKDFACTRFKAEYPVFQKVRVNGPDAAPLYKFLK
ASKPGLFGSRIKWNFTKFLIDKNGKVINRYSTATSPLSFEKDILKALED

Transcript Sequence

Transcript ID

Os03t0358100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:13879058:13882301:1 gene:Os03g0358100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE description:Similar to Glutathione peroxidase. (Os03t0358100-01)
Sequence

AGAGCGAGGAGAGAGAGAGATAGGGAGAGGGATTTCGATTTTTTTTTCTCCACGGCGAAA
TCCGCGAGGCGGAGGAGGAGGAGGAGGGCGAGATGGGGGCGGCGGAATCCGTGCCGGAGA
CCTCCATACACGAATTCACCGTCAAGGATTGCAACGGCAAGGAGGTGAGCCTGGAGATGT
ACAAGGGGAAGGTGCTAATCGTCGTCAACGTCGCCTCCAAATGTGGGTTCACGGAGACCA
ACTACACGCAGCTGACGGAGCTCTATCAGAAACACAGGGACAAAGATTTTGAGATTCTAG
CATTTCCCTGCAATCAGTTCTTGCGACAAGAGCCAGGATCTGACCAGCAAATAAAGGATT
TTGCTTGCACAAGATTTAAAGCTGAATATCCCGTTTTTCAGAAGGTGCGTGTAAATGGTC
CTGATGCTGCACCACTTTACAAATTTTTGAAAGCTAGCAAGCCTGGCTTGTTTGGATCTA
GAATCAAGTGGAACTTTACCAAATTTCTTATTGATAAGAATGGCAAAGTCATTAACAGAT
ACTCGACTGCGACCAGTCCCTTGTCTTTTGAGAAAGACATCCTGAAGGCGCTCGAGGATT
AGATCTCGTACCCTCCCCCATCCTTCATTTGCAGAAGTAGGCAAAGTATCTGGTTGTAAT
ATCTAGACCTATGGGATGCTCAATAGTGAATTTTTGCAATATATTCCTTCTTTTGTGTAG
TGTATTTGTTGTCTTTATATATTATTATATTGTAAGTAGAGGTTGGCTGGTTGGGTAGGC
ACTGTTTTGTCTATACTGGTTTTATATGGCTTGGCTTGAAAATTTGTTTAGAAACCTAAG
ACATTATTATCAACGTGTAATATCGACAAGTTGAAATTGT