Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0356484-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:13659659:13662772:-1 gene:Os03g0356484 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os03t0356484-01)
Sequence

ATGGATTCGCACGTAGGCAAGTTATTCGATTCGGTGGGCTCGATCTTCCGCGGCAGCGAC
ACCCTCCCCTGGTGCGACCGCGACATCATCGCTGGTTGTGAGAACGAGGTTGCGGAGGCT
GCGAATGAAGAACAGAAGAATGAGAGCCTTATGAGGCTTTCGTGGGCGCTTGTTCACTCC
AGACAGCCTGAGGATGTGAACCGCGGCATTGGAATGCTTCAAGCTTCTTTGGACAGGTCT
ACCAGTCCACTGCAGACAAGGGAGAAGCTCTACTTACTGGCTGTTGGACACTACAGAACT
GGTGATTATACAAGGAGTCGGCAGCTTTTGGAAAGATGCTTAGAGATTCAACCTGACTGG
AGGCAAGCTCTCACTTTACAAAGGCTTGTTGAGGACAAAACCAGAAGAGACGGTATGATT
GGCATGGCTATTGTCACTGGTGCCTTCGGACTTGTGGGACTTGTTGCTGGTGGAATCATC
GCTGCCGCTTCTTCTTCATCCTCATCATCTAGGAAGAAATGA

Peptide Sequence

PEP ID

Os03t0356484-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:13659659:13662772:-1 gene:Os03g0356484 transcript:Os03t0356484-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os03t0356484-01)
Sequence

MDSHVGKLFDSVGSIFRGSDTLPWCDRDIIAGCENEVAEAANEEQKNESLMRLSWALVHS
RQPEDVNRGIGMLQASLDRSTSPLQTREKLYLLAVGHYRTGDYTRSRQLLERCLEIQPDW
RQALTLQRLVEDKTRRDGMIGMAIVTGAFGLVGLVAGGIIAAASSSSSSSRKK

Transcript Sequence

Transcript ID

Os03t0356484-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:13659659:13662772:-1 gene:Os03g0356484 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os03t0356484-01)
Sequence

AGCCACCAAGGCTCAGAAACCGCCTACAAAACGGCGCCCGGCGTCCCACGGATCAAGCGA
CCCCCTAAAAAACCAACCGAAAAAGAAAAAAAAAAGAAGCAGAGAAAAAAGCTCTCGCGG
CATGGATTCGCACGTAGGCAAGTTATTCGATTCGGTGGGCTCGATCTTCCGCGGCAGCGA
CACCCTCCCCTGGTGCGACCGCGACATCATCGCTGGTTGTGAGAACGAGGTTGCGGAGGC
TGCGAATGAAGAACAGAAGAATGAGAGCCTTATGAGGCTTTCGTGGGCGCTTGTTCACTC
CAGACAGCCTGAGGATGTGAACCGCGGCATTGGAATGCTTCAAGCTTCTTTGGACAGGTC
TACCAGTCCACTGCAGACAAGGGAGAAGCTCTACTTACTGGCTGTTGGACACTACAGAAC
TGGTGATTATACAAGGAGTCGGCAGCTTTTGGAAAGATGCTTAGAGATTCAACCTGACTG
GAGGCAAGCTCTCACTTTACAAAGGCTTGTTGAGGACAAAACCAGAAGAGACGGTATGAT
TGGCATGGCTATTGTCACTGGTGCCTTCGGACTTGTGGGACTTGTTGCTGGTGGAATCAT
CGCTGCCGCTTCTTCTTCATCCTCATCATCTAGGAAGAAATGAGGAACCCATATCAAGTG
AATAAGATGTCAAGATGGGCAAGAAATCGATGTAAATATGCGCATCTTGCTGTCATACTT
GTTGCAACCGTATACTCACGTCTCCATTTTTCAGTCCTTTTACCATGAGTTCAAACAGGA
GACATCACATGCCTGCATGTTAAACATCATGGAAGATGAGGAGGCTCCTGTTATGAGTTG
CAATCAGGATTTACGTAACCTTGTGGTT