Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0356300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:13627581:13630305:-1 gene:Os03g0356300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L6 family protein. (Os03t0356300-01)
Sequence

ATGGCGTCCCTCTCCCCTTCCCTCCACCTCCCTTGCAATTCAAGGACTGGCTTTGCTGGA
AAGACACAAGGGATTCGTCTTCGTGTTATCCCTGCTGGCAGAGTTGGTTTTGTCAGAACA
ACAGTGGAGTGCAAAGAATCTAGAATAGGAAAGAAGCCGATCGAAGTGCCATCAAATGTG
ACCCTCACGTTAGAGGAGCAGTTTATTAAGGCTAAGGGTCCATTAGGAGAATTATCACTA
AACTATCCAGGTGAAGTAAAAGTGGTGAAAGAAGAATCTGGTAAGCTGAGAGTTTCCAAG
ACTGTGGAGACCAAAAGGGCAAACCAGATGCATGGCCTTTTCAGGACCCTGACTGACAAC
ATCATCGTAGGTGTGTCAAAGGGGTTTGATAAGAAGCTTCAGCTAGTTGGGGTTGGATAC
CGTGCAGCGGTGGAGGGTAAAGATCTTGTGATGAACCTGGGATTTTCGCACCCGGTTCGG
ATGGCTGTTCCAGAAGGCCTGAAAGTTAAGGTGGAAGAGAACACCAGGATCATTGTGAGT
GGCTACGACAAGAGCGAGATCGGTCAATTCGCTGCTTCCATAAAGAAGTGGAGGCCGCCT
GAACCATACAAGGGGAAGGGCATCCGGTATGCCGATGAGATCGTCAGAAGAAAGGAGGGC
AAGGCTGGGAAGAAGAAATAG

Peptide Sequence

PEP ID

Os03t0356300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:13627581:13630305:-1 gene:Os03g0356300 transcript:Os03t0356300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L6 family protein. (Os03t0356300-01)
Sequence

MASLSPSLHLPCNSRTGFAGKTQGIRLRVIPAGRVGFVRTTVECKESRIGKKPIEVPSNV
TLTLEEQFIKAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDN
IIVGVSKGFDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVS
GYDKSEIGQFAASIKKWRPPEPYKGKGIRYADEIVRRKEGKAGKKK

Transcript Sequence

Transcript ID

Os03t0356300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:13627581:13630305:-1 gene:Os03g0356300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L6 family protein. (Os03t0356300-01)
Sequence

GATACACTGCGAGTGACCGGAGGCAGCGTCTCCTCCTCCTCCTCCTGCGGCTGCGTCTAC
GAGCGCGTCCATGGCGTCCCTCTCCCCTTCCCTCCACCTCCCTTGCAATTCAAGGACTGG
CTTTGCTGGAAAGACACAAGGGATTCGTCTTCGTGTTATCCCTGCTGGCAGAGTTGGTTT
TGTCAGAACAACAGTGGAGTGCAAAGAATCTAGAATAGGAAAGAAGCCGATCGAAGTGCC
ATCAAATGTGACCCTCACGTTAGAGGAGCAGTTTATTAAGGCTAAGGGTCCATTAGGAGA
ATTATCACTAAACTATCCAGGTGAAGTAAAAGTGGTGAAAGAAGAATCTGGTAAGCTGAG
AGTTTCCAAGACTGTGGAGACCAAAAGGGCAAACCAGATGCATGGCCTTTTCAGGACCCT
GACTGACAACATCATCGTAGGTGTGTCAAAGGGGTTTGATAAGAAGCTTCAGCTAGTTGG
GGTTGGATACCGTGCAGCGGTGGAGGGTAAAGATCTTGTGATGAACCTGGGATTTTCGCA
CCCGGTTCGGATGGCTGTTCCAGAAGGCCTGAAAGTTAAGGTGGAAGAGAACACCAGGAT
CATTGTGAGTGGCTACGACAAGAGCGAGATCGGTCAATTCGCTGCTTCCATAAAGAAGTG
GAGGCCGCCTGAACCATACAAGGGGAAGGGCATCCGGTATGCCGATGAGATCGTCAGAAG
AAAGGAGGGCAAGGCTGGGAAGAAGAAATAGAAACCGAGTCTTTGTTGTACTTTGGGTTT
CATACTTCATTCAATTTTTTTTCCGATGTAATCCCTCTCTTATTTTGTGAAGAAGAAACC
AAACCAGTAAGAAAGAACATGTTCTTTGGATCTTCCGTGACTTGTAGAGATGCGATGAAA
CATGAAACTGTTTTCATCAACACATGGTCTGCTTAGCGTGATTGCGATGCTACCAAGAAC
TCCCAGCAACATATATACATGATGATACAATTGATAAGC