Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0355300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:13574903:13577311:-1 gene:Os03g0355300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-71 description:Protein of unknown function DUF1618 domain containing protein. (Os03t0355300-01)
Sequence

ATGGCTGCCATGGGAAGAACTGTACTACCTTCCTATGTTCTTCTGGATCGCATCGTTCGA
TCGGAGGAGGAAGCCGTCGAGGAGGAGTCGGAGTGGGCGGCCATGGAGTGCGCGGACTGG
AAGTCGTACGGGTGCCACCCCGGTGACGAACGCTACCCCAGGAACGCCGCTAGGGTGAAG
GGCATGCTGCTCCTGGCGCGCCTCGCGGAGCCCCCGGGTCTCTCCGAGCTCTCCATCCGC
CTCTCCGCCGCCGCCGCCGTGCCCAGGCCGCCGCCGGCCAGCTTCCCCCCCGGCGCCGCC
GTCCCGCCCATCCCCAACTTGCCCGACGCGTCACCGTACGACGACCCGCCGCTCACCTAC
GTCGAGGCGGCAGGCGACGGCCTCATCGCCCTCACCTCGTGCTTCCGGGATGGCTGCAGC
TGCTACCTCGTCTACGACGTCGTCGGCAAGTCGCTCTCCATGATCCCGGGCCTGCCCGAG
TCCTGCCTCACCTACTGCAGCATGCGGCCTCTCCCCCTGCGCACCGCCGCCGCCGGTGGC
TACGCGCTGCGCAGCAGCTACTCGCTGGCCATCGTGGCTAAGGACATGCGGTTTGACATG
GAAGCGGGGCGAGACGTCTACCGGGATGTTCTCTGCCTGTGCCCACCGCGGCCATCATCA
TCCTCAAGTTCCAGGGGGGGCATCACGCCATGGCAATTCAAGGACGCCATCTTCCCATCA
CAGATGCCGGGTTCCTTCCACGGTGACAAGGTGTTCTCGTTCGGAGGCCACGCGTTCTGG
GCCGACCTCGCAAAGGGCGTCCTCTTCTGTAGGTGCGACGATGCTCTCTCCGGCCGCAAT
GATGATGCCGTGCAATTCCGCTACATCCCGCTGCCTGTAGAGTGCCATCTTAAAATCAGT
TTCGCCATGAGGGGTGACCTCCAGCTATGCCGCACAATGAGCTGTGTCGACGGCTGCGGT
GACTCTATCAAGTTCGTCTGCATCAGTGACGGCGGATCCAGCTCTGCGCACACCGGCGAT
CGTGCGATAACGATGTGGACACTGACCCTCGCAACCGGGGAGTGGCTGAAAGATGCACAA
CTCATGGTGGCAGATCTGTGGGAGCTGGAGGGCTTCGACAAGGCGAGGTTGCCCAAGGCC
ATACCAATTAGCCCTGTCCTGAACCCTCAGGAAGATGGTGTCCTTAGTTTCATGCTCAAC
GATGCCGATGCAGAGCTGTACATGGTCAGCCTTAACATGCACAGCAAGAAGCTCCTCTCG
TCCTTGACCCTCTCATCCTGCCCTGATGACATTGTTCCTCCTTTGGGTTTGGATCTTTCC
AAAGACCTTCAGAATCTGTCTCTTCGCCCTATTGCTGCTGAGTCTGTTCCAGCCAAGACA
CAGGGACGCCCAATTGCAACCAAGAGGAGGAGGTCGTCATTACCGTAG

Peptide Sequence

PEP ID

Os03t0355300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:13574903:13577311:-1 gene:Os03g0355300 transcript:Os03t0355300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-71 description:Protein of unknown function DUF1618 domain containing protein. (Os03t0355300-01)
Sequence

MAAMGRTVLPSYVLLDRIVRSEEEAVEEESEWAAMECADWKSYGCHPGDERYPRNAARVK
GMLLLARLAEPPGLSELSIRLSAAAAVPRPPPASFPPGAAVPPIPNLPDASPYDDPPLTY
VEAAGDGLIALTSCFRDGCSCYLVYDVVGKSLSMIPGLPESCLTYCSMRPLPLRTAAAGG
YALRSSYSLAIVAKDMRFDMEAGRDVYRDVLCLCPPRPSSSSSSRGGITPWQFKDAIFPS
QMPGSFHGDKVFSFGGHAFWADLAKGVLFCRCDDALSGRNDDAVQFRYIPLPVECHLKIS
FAMRGDLQLCRTMSCVDGCGDSIKFVCISDGGSSSAHTGDRAITMWTLTLATGEWLKDAQ
LMVADLWELEGFDKARLPKAIPISPVLNPQEDGVLSFMLNDADAELYMVSLNMHSKKLLS
SLTLSSCPDDIVPPLGLDLSKDLQNLSLRPIAAESVPAKTQGRPIATKRRRSSLP

Transcript Sequence

Transcript ID

Os03t0355300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:13574903:13577311:-1 gene:Os03g0355300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-71 description:Protein of unknown function DUF1618 domain containing protein. (Os03t0355300-01)
Sequence

AGAAAAGAAAAGAAAAGAAAAATCCCCTCCGCCTCCTCCCCCAATCCTTAACCTAAACTC
CGATCCCCTCCGCCTTCCATGGCTGCCATGGGAAGAACTGTACTACCTTCCTATGTTCTT
CTGGATCGCATCGTTCGATCGGAGGAGGAAGCCGTCGAGGAGGAGTCGGAGTGGGCGGCC
ATGGAGTGCGCGGACTGGAAGTCGTACGGGTGCCACCCCGGTGACGAACGCTACCCCAGG
AACGCCGCTAGGGTGAAGGGCATGCTGCTCCTGGCGCGCCTCGCGGAGCCCCCGGGTCTC
TCCGAGCTCTCCATCCGCCTCTCCGCCGCCGCCGCCGTGCCCAGGCCGCCGCCGGCCAGC
TTCCCCCCCGGCGCCGCCGTCCCGCCCATCCCCAACTTGCCCGACGCGTCACCGTACGAC
GACCCGCCGCTCACCTACGTCGAGGCGGCAGGCGACGGCCTCATCGCCCTCACCTCGTGC
TTCCGGGATGGCTGCAGCTGCTACCTCGTCTACGACGTCGTCGGCAAGTCGCTCTCCATG
ATCCCGGGCCTGCCCGAGTCCTGCCTCACCTACTGCAGCATGCGGCCTCTCCCCCTGCGC
ACCGCCGCCGCCGGTGGCTACGCGCTGCGCAGCAGCTACTCGCTGGCCATCGTGGCTAAG
GACATGCGGTTTGACATGGAAGCGGGGCGAGACGTCTACCGGGATGTTCTCTGCCTGTGC
CCACCGCGGCCATCATCATCCTCAAGTTCCAGGGGGGGCATCACGCCATGGCAATTCAAG
GACGCCATCTTCCCATCACAGATGCCGGGTTCCTTCCACGGTGACAAGGTGTTCTCGTTC
GGAGGCCACGCGTTCTGGGCCGACCTCGCAAAGGGCGTCCTCTTCTGTAGGTGCGACGAT
GCTCTCTCCGGCCGCAATGATGATGCCGTGCAATTCCGCTACATCCCGCTGCCTGTAGAG
TGCCATCTTAAAATCAGTTTCGCCATGAGGGGTGACCTCCAGCTATGCCGCACAATGAGC
TGTGTCGACGGCTGCGGTGACTCTATCAAGTTCGTCTGCATCAGTGACGGCGGATCCAGC
TCTGCGCACACCGGCGATCGTGCGATAACGATGTGGACACTGACCCTCGCAACCGGGGAG
TGGCTGAAAGATGCACAACTCATGGTGGCAGATCTGTGGGAGCTGGAGGGCTTCGACAAG
GCGAGGTTGCCCAAGGCCATACCAATTAGCCCTGTCCTGAACCCTCAGGAAGATGGTGTC
CTTAGTTTCATGCTCAACGATGCCGATGCAGAGCTGTACATGGTCAGCCTTAACATGCAC
AGCAAGAAGCTCCTCTCGTCCTTGACCCTCTCATCCTGCCCTGATGACATTGTTCCTCCT
TTGGGTTTGGATCTTTCCAAAGACCTTCAGAATCTGTCTCTTCGCCCTATTGCTGCTGAG
TCTGTTCCAGCCAAGACACAGGGACGCCCAATTGCAACCAAGAGGAGGAGGTCGTCATTA
CCGTAGTGACATCTTTGTCAGGTAATTCTACCGCTATAAGCTTCTGCAGTCTGTCGATGA
GATGATGAGGTCAGGTAATTCTACCGCTATAAGCTTCTGCAGTCTGTCGATGAGATGATG
ATTTATTTAGCTTCAACTGCTGTGATCCATGCTTTACTGATTTGTTGTTAATTGTTATAA
ATATACTGCTAGTTGTGCCACACTGCCATTTAAGATACTCTGAAGAATAAGGATAGATGA
TTAATTTAGCTTCAACTGGTGTGACCCATACTCTCATTTGTTTGTTAATTATTATAACTA
TATTGCTAGTTGTGCCATTTAAGATACTCTGAGGAATAAGCTTCTGTAGATGAGATGATT
AATTTAGCTTCAATTGGTGTGACCTATACTTACTGATTTGTTGTTAATTAGTATTGTACT
GCTAGTTGTGCCATTTAAATTGCTCTGAGGAATAAAAGCAGCTAGCATGAAATTGCCATC
CTTCTAACTTCTAGTTTATTTTGCTTGACAACAGTGGACGGCTCGTGATGCTGGAGCAGA
CTTCATTTTGCCAGGCTGCTGCTTACTTGGTAGGGTAGGGATCGTATTCTTCGTGCCGTC
TTGCTGTTTTGCAAGCTGACTCTTTAGGTTTTATATTGCTGCCGCCACCGTTATGAAATC
AGATGATGAACACAATATAAGAGATTTTGGATGGATGTTACATAACTAGTATAATAAATC
TAGTCACATCCATCCAAAATATATTATCAGAATTATATTGCTTGACCATACATGACTAGT
TGAGTATTGCTAGTCGGAATTGTTAAGAGTGGTTAACGTAAAGACCTTGTGAGATTATTA
TCTTGATTAGAACGTAAATGCATCTAGCCTGTTGCAATTCCAAGGATTGATTCCACAAGT
GTGGGAATG