Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0353500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:13289325:13291461:1 gene:Os03g0353500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleolar protein 12 domain containing protein. (Os03t0353500-01)
Sequence

ATGGCGTGGGAGGAGGAGGCGGCGGTGGAAGAGGAGTACGAGTACGGGGAGGAGATGGAG
GGGTCGGGGTCGGAGGCGGAGGACGTGGTGGTGGGGCAGATGCCGACGGTGATGGTGCCC
AAGCACATCAACAAACGCGCCCTCAAGAACAAGGCCCTCTCCGTCTCCCTCGACAAGAAA
GCCCTCAAGGATTTCGTGACCGGATTTCACAAGAGGAAGAAGAAGAGGAGAAAGGAGGCG
CAGAAGATTTTGCAGGAGAAGGAGAGAAAGAAGCGAATCGAGGAGCGCAAGCGGAGAAAG
CAAGAGAAAGAAATTGCGCTGTATGGAAGAGTCCTGTCATCAGATAATGCTGATGGTGAA
GATGTTGAGAATGATGGTGATGAAATGGAAACTGATGATTTGCCTGAACCTGAAGTAAAA
ACATACGAAGATGGTGGGACTAAAATTACGGTCACCACGAGCGAAATCACTCCTGAAGAT
GACGATGAAGACCTTGGCCCGAAAAGGATCACCCCTGCATCGACGGGCTACGCCAACAAG
AGCGTCTCCAAGAAGAGTGCTAGTCTAGGTGTAAAGAAGAAGCCATCGAAGAGAACCTTC
AGGAATAAGAGTAAATCTAAGAAGGGCGACCAGAAGCGAGGTGCTGCAAAGGGTAAACGG
AAGAACAAAGGGAGGAAGTGA

Peptide Sequence

PEP ID

Os03t0353500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:13289325:13291461:1 gene:Os03g0353500 transcript:Os03t0353500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleolar protein 12 domain containing protein. (Os03t0353500-01)
Sequence

MAWEEEAAVEEEYEYGEEMEGSGSEAEDVVVGQMPTVMVPKHINKRALKNKALSVSLDKK
ALKDFVTGFHKRKKKRRKEAQKILQEKERKKRIEERKRRKQEKEIALYGRVLSSDNADGE
DVENDGDEMETDDLPEPEVKTYEDGGTKITVTTSEITPEDDDEDLGPKRITPASTGYANK
SVSKKSASLGVKKKPSKRTFRNKSKSKKGDQKRGAAKGKRKNKGRK

Transcript Sequence

Transcript ID

Os03t0353500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:13289325:13291461:1 gene:Os03g0353500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleolar protein 12 domain containing protein. (Os03t0353500-01)
Sequence

GCTGGCCGTCACGAAGGCGGCGGCGGCTTCCTTCCTCGTCTCCCCACAAGAGAGAGAGAG
AGAGAGAGAGAGAGAGCGAGCCAGCGAACTTCGTAGCCATGGCGTGGGAGGAGGAGGCGG
CGGTGGAAGAGGAGTACGAGTACGGGGAGGAGATGGAGGGGTCGGGGTCGGAGGCGGAGG
ACGTGGTGGTGGGGCAGATGCCGACGGTGATGGTGCCCAAGCACATCAACAAACGCGCCC
TCAAGAACAAGGCCCTCTCCGTCTCCCTCGACAAGAAAGCCCTCAAGGATTTCGTGACCG
GATTTCACAAGAGGAAGAAGAAGAGGAGAAAGGAGGCGCAGAAGATTTTGCAGGAGAAGG
AGAGAAAGAAGCGAATCGAGGAGCGCAAGCGGAGAAAGCAAGAGAAAGAAATTGCGCTGT
ATGGAAGAGTCCTGTCATCAGATAATGCTGATGGTGAAGATGTTGAGAATGATGGTGATG
AAATGGAAACTGATGATTTGCCTGAACCTGAAGTAAAAACATACGAAGATGGTGGGACTA
AAATTACGGTCACCACGAGCGAAATCACTCCTGAAGATGACGATGAAGACCTTGGCCCGA
AAAGGATCACCCCTGCATCGACGGGCTACGCCAACAAGAGCGTCTCCAAGAAGAGTGCTA
GTCTAGGTGTAAAGAAGAAGCCATCGAAGAGAACCTTCAGGAATAAGAGTAAATCTAAGA
AGGGCGACCAGAAGCGAGGTGCTGCAAAGGGTAAACGGAAGAACAAAGGGAGGAAGTGAG
TGAATGTTTCTGTAACCACTCTGTAGAAATGTTTGCACCTTTGGCCAGGGCCAGAGGCCA
GAGCTGCCGTTTTTGCCAGACACGATGAACTTTGTACTCGGTTCCTGATTCATCATCCAA
ATGAGGCTAATCATGCTCAGCAGCC