Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0352400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:13227322:13232070:1 gene:Os03g0352400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Nuclear/Nucleolar GTPase 2 description:Similar to Nucleolar GTP-binding protein 2 (Autoantigen NGP-1). (Os03t0352400-01)
Sequence	ATGGCGAAGAAGAAGGAGAGGGCGGTGAACGTGTCGGGGAAGCCGCGCCACTCGCTCGAC GTCAACCGCGCCAATGACAAGAAGGGCGCGGGCGGCGGCGCCGGGGGCGGCGGCGGCGGC CGCTCGGCCGCCACGGTGCGGCGGCTCAAGATGTACAAGATGAGGCCCCTCAGGGACCGA GGCGGGAAGATCCTGAAGCACGACCTCCAGTCCAAGGAGCTCCCCAACACCCGCATCGAG CCCGATCGCCGCTGGTTCGGAAATACACGAGTCGTTAATCAGAAAGAGCTTGAATTCTTT CGGGAGGAACTCCAGAGTCGGCTTTCCAATAACTATAATGTGATACTGAAAGAGCGGAAG CTTCCACTGTCACTACTGCAGGATCATCAAAAGCAAGCTAGGGCGCATCTTCTTGACACT GAACCTTTTGAGCATGCATTTGGACCAAAGGGCAAGAGGAAACGCCCAAAACTAATGGCT CTTGATTACGAATCTCTATTGAAGAAAGCTGATGATTCTCAAGGTGCATTTGAGGATAAG CATGCTACAGCGAAGTTGCTGAAAGAGGAAGAGGAAGATGGCTTACGAGACCTAGTCCGG CACACAATGTTCGAGAAGGGACAGAGCAAAAGAATTTGGGGTGAACTCTATAAAGTTATT GACTCTTCAGATGTTGTCGTGCAGGTGTTGGATGCCAGGGATCCAATGGGTACTAGATGC TACCATCTGGAGAAACATCTGAAGGAGAATGCCAAGCACAAACACTTGGTATTCTTACTA AATAAGTGTGATCTAGTACCTGCTTGGGCCACAAAAGGATGGTTGCGCACTTTATCAAAG GACTACCCCACCCTAGCATTCCATGCAAGCATCAACAGTTCATTTGGCAAAGGATCACTT CTTTCAGTGTTACGGCAGTTTGCACGCCTGAAGAGTGACAAACAAGCTATATCTGTTGGT TTTGTTGGATACCCCAATGTTGGGAAGTCATCAGTTATCAACACGTTACGCTCCAAGAGT GTTTGCAAAGTGGCTCCAATTCCTGGAGAGACGAAGGTGTGGCAGTACATTACTCTGACT AAAAGAATATTTCTGATTGACTGCCCTGGGGTTGTGTACCAAAACAATGATTCAGAAACT GATATTGTTCTTAAGGGCGTGGTGCGTGTGACAAATTTGGCGGATGCTTCTGAGCACATT GGTGAAGTTCTGAGACGTGTAAAAAAGGAGCATCTTAAAAGAGCTTACAAAATTGAAGAC TGGGTTGATGATAATGATTTTCTTGTCCAACTGAGCAAGACCACTGGAAAGCTACTCAGG GGTGGGGAGCCTGATCTTACAACAACGGCCAAGATGGTGCTTCATGACTGGCAGAGGGGC AAGATTCCCTTTTTTGTGCCTCCACCACAGCAAGGTGAAGATAGTCCATCTGAAACAGCT GAACCTGTGGAGAAATCCGATGAGGAAGGGGTGAGCAGTGACAGAACTGCTGCCGCCATG AAAGCGATAGCGGGAATAATCTCATCACAGCAGCAGATGAATGTTCCTTGCCAAAAGGAA TTTGGTGTAACTAATGAAGATAGTGAAGTCGCGGAGCAATCAGAGTGA

Peptide Sequence

PEP ID	Os03t0352400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:13227322:13232070:1 gene:Os03g0352400 transcript:Os03t0352400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Nuclear/Nucleolar GTPase 2 description:Similar to Nucleolar GTP-binding protein 2 (Autoantigen NGP-1). (Os03t0352400-01)
Sequence	MAKKKERAVNVSGKPRHSLDVNRANDKKGAGGGAGGGGGGRSAATVRRLKMYKMRPLRDR GGKILKHDLQSKELPNTRIEPDRRWFGNTRVVNQKELEFFREELQSRLSNNYNVILKERK LPLSLLQDHQKQARAHLLDTEPFEHAFGPKGKRKRPKLMALDYESLLKKADDSQGAFEDK HATAKLLKEEEEDGLRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRC YHLEKHLKENAKHKHLVFLLNKCDLVPAWATKGWLRTLSKDYPTLAFHASINSSFGKGSL LSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETKVWQYITLT KRIFLIDCPGVVYQNNDSETDIVLKGVVRVTNLADASEHIGEVLRRVKKEHLKRAYKIED WVDDNDFLVQLSKTTGKLLRGGEPDLTTTAKMVLHDWQRGKIPFFVPPPQQGEDSPSETA EPVEKSDEEGVSSDRTAAAMKAIAGIISSQQQMNVPCQKEFGVTNEDSEVAEQSE

Transcript Sequence

Transcript ID	Os03t0352400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:13227322:13232070:1 gene:Os03g0352400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Nuclear/Nucleolar GTPase 2 description:Similar to Nucleolar GTP-binding protein 2 (Autoantigen NGP-1). (Os03t0352400-01)
Sequence	CTCTCTCCCCCCGCACCACCGCCTCCCCTCCTCTCCTCTCCTCTCTCCCGCCGACCAGGA GAAAGAAGGAAAAAGAAGAAGAAAAATCCTCTGCGATGGCGAAGAAGAAGGAGAGGGCGG TGAACGTGTCGGGGAAGCCGCGCCACTCGCTCGACGTCAACCGCGCCAATGACAAGAAGG GCGCGGGCGGCGGCGCCGGGGGCGGCGGCGGCGGCCGCTCGGCCGCCACGGTGCGGCGGC TCAAGATGTACAAGATGAGGCCCCTCAGGGACCGAGGCGGGAAGATCCTGAAGCACGACC TCCAGTCCAAGGAGCTCCCCAACACCCGCATCGAGCCCGATCGCCGCTGGTTCGGAAATA CACGAGTCGTTAATCAGAAAGAGCTTGAATTCTTTCGGGAGGAACTCCAGAGTCGGCTTT CCAATAACTATAATGTGATACTGAAAGAGCGGAAGCTTCCACTGTCACTACTGCAGGATC ATCAAAAGCAAGCTAGGGCGCATCTTCTTGACACTGAACCTTTTGAGCATGCATTTGGAC CAAAGGGCAAGAGGAAACGCCCAAAACTAATGGCTCTTGATTACGAATCTCTATTGAAGA AAGCTGATGATTCTCAAGGTGCATTTGAGGATAAGCATGCTACAGCGAAGTTGCTGAAAG AGGAAGAGGAAGATGGCTTACGAGACCTAGTCCGGCACACAATGTTCGAGAAGGGACAGA GCAAAAGAATTTGGGGTGAACTCTATAAAGTTATTGACTCTTCAGATGTTGTCGTGCAGG TGTTGGATGCCAGGGATCCAATGGGTACTAGATGCTACCATCTGGAGAAACATCTGAAGG AGAATGCCAAGCACAAACACTTGGTATTCTTACTAAATAAGTGTGATCTAGTACCTGCTT GGGCCACAAAAGGATGGTTGCGCACTTTATCAAAGGACTACCCCACCCTAGCATTCCATG CAAGCATCAACAGTTCATTTGGCAAAGGATCACTTCTTTCAGTGTTACGGCAGTTTGCAC GCCTGAAGAGTGACAAACAAGCTATATCTGTTGGTTTTGTTGGATACCCCAATGTTGGGA AGTCATCAGTTATCAACACGTTACGCTCCAAGAGTGTTTGCAAAGTGGCTCCAATTCCTG GAGAGACGAAGGTGTGGCAGTACATTACTCTGACTAAAAGAATATTTCTGATTGACTGCC CTGGGGTTGTGTACCAAAACAATGATTCAGAAACTGATATTGTTCTTAAGGGCGTGGTGC GTGTGACAAATTTGGCGGATGCTTCTGAGCACATTGGTGAAGTTCTGAGACGTGTAAAAA AGGAGCATCTTAAAAGAGCTTACAAAATTGAAGACTGGGTTGATGATAATGATTTTCTTG TCCAACTGAGCAAGACCACTGGAAAGCTACTCAGGGGTGGGGAGCCTGATCTTACAACAA CGGCCAAGATGGTGCTTCATGACTGGCAGAGGGGCAAGATTCCCTTTTTTGTGCCTCCAC CACAGCAAGGTGAAGATAGTCCATCTGAAACAGCTGAACCTGTGGAGAAATCCGATGAGG AAGGGGTGAGCAGTGACAGAACTGCTGCCGCCATGAAAGCGATAGCGGGAATAATCTCAT CACAGCAGCAGATGAATGTTCCTTGCCAAAAGGAATTTGGTGTAACTAATGAAGATAGTG AAGTCGCGGAGCAATCAGAGTGATCTACAAAAGGCTAGGAACCCTGCATGATAAAGAACA GGGCACAATTTTGCCAAATACCTAGAGATTTTATGAAGATTTGGTGTCTAACAGGAATGT TACGATGAATGTTACGATCGTTCAGTTCACCGGTGCGTTCTACTGCAACGAAAGAGCGTT CACTGCAACGAAAGACTGGAATCAAGGGTGTGGGACTGGGAAACTTCTGTAACTTCATAT ATTGTGTGGGCCTTTGTTGTAGACCAGATAGAGTGTTTTGGTAGCTTAATATAACCATTT TGTTCCAACTGTACTTGAAACAAATTTATTCCGATACATTAATTCCGCAAAGTCGTTCGT ATTTGTATGGGGTC