Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0352300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:13222688:13225476:-1 gene:Os03g0352300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nucleolar protein. (Os03t0352300-01);Similar to nucleolar protein Nop56. (Os03t0352300-02);Similar to nucleolar protein Nop56. (Os03t0352300-03)
Sequence	ATGGCGCTGTACCTGCTCTTCGAGTCGGCGTCCGGCTACGGCCTCTTCCACGCCTACGGC ATCGACGAGATCGGGCAGAGCGTGGACGCCGTCCGCGCCTCCGTCGTCGACCTCGACCGC TTCGGCAAGGCCGTCAAGCTCGCCGCCTTCACCCCCTTCTCCTCCGCCGTGGACGCCCTC AACCAGTGCAACGCCATCTCCGAAGGGATCATGACCGACGAGCTGAGGAGCTTCCTGGAG CTGAACCTGCCCAAGCCCAAGGAGGGGAAGAAGGCCAAGTACAGCCTCGGCGTCGTCGAG CCCAAGGTCGGCTCCCACATCTCCGAGGTCACCGGCATCCCGTGCCAGAGCAACGAGTTC GTCCAGGAGCTTCTCCGCGGCGTCCGCCTCCACTTCGACCGCTTCATCAGCGAGCTCAAG AAATCGGACTTGGAGAAGGCGCAGCTTGGCCTGGGTCATAGCTACAGCAGGGCGAAGGTG AAGTTCAATGTGAACCGCGTTGACAACATGGTGATTCAGGCTATCTTCCTGTTGGATACA CTTGACAAGGACATCAATTCTTTCTCCATGAGAGTGAGGGAATGGTTTGGATGGCATTTT CCTGAGTTGGTCAAAATTGTCAATGACAACTACATCTATGCTAAGCTTGCTGATTATATA AAGGACAAATCTGAGTTGGCGGAAAAAGATATTTCGAAGTTAGCTGATCTGATTGGAGAT GAAGATAAGGCAAAAGAAGTTGTCGAAGCAGCAAAGGCTTCAATGGGTCAGGATCTGTCA GAAGTTGATTTGATGAATGTGAAGCAGTTTGCTCAAAGAGTCATGAATCTGTCTGAATAT CGTAAAAACCTTTATGAGTATCTTGTTACCAAGATGAATGATATTGCACCGAATCTAACA TCATTAATTGGTGAAGTTGTTGGAGCACGCCTTATCTCTCATGCTGGCAGTCTTTCAAAC CTTGCTAAGTGTCCTGCCTCCACTCTCCAGATACTTGGTGCTGAAAAGGCACTTTTCAGG GCATTGAAAACTAGGGGGAATACGCCAAAGTATGGCCTTATATTCCACTCATCCTTCATT GGCCGTGCTTCAACCAAGAACAAAGGCAGAATGGCTAGATATCTGGCGAACAAGTGCTCC ATTGCATCACGCATTGATTGTTATTCAGAGTCAGCTACCGCAGTCTTTGGGCAAAAGCTT CGTGAGCAAGTTGAGGAGCGGTTAGACTTCTATGACAAGGGTGTTGCACCTCGTAAAAAC CTTGATGTGATGAAAGCTGCGATAGACAGCATGGTTAATGATGCCACAAATGATGTTGAT GATGGCGAGAAGGTCGATGCATCTGCCAAGAAAAGTAAGAAAAAGAAGTCTAAAGCTGAA GCTGACGGCGAAGCAATGGACCTGGACAAGCCTTCCAATGTGGCTGATGAAGCTGAGCCT GGAACTGAGAAGAAGAAAAAGAAGAAGAAGCACAAGCTGGAGGAGGAGCCACAGGAGCAG GAGAAGAGCGTGGCGCATGCCAATGGCGACGCCGAGGAGAACGGTACTCCCAAGAAGAAG AAGAAGAAGAACCGTGAAGTCTCGGAGGACGCTGAGCCTAAGACGGCCACTGAAGGGAAG AAGAAAAAGAAGAAGTCCAAGACGGAGGACAGCGACTGA

Peptide Sequence

PEP ID	Os03t0352300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:13222688:13225476:-1 gene:Os03g0352300 transcript:Os03t0352300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nucleolar protein. (Os03t0352300-01);Similar to nucleolar protein Nop56. (Os03t0352300-02);Similar to nucleolar protein Nop56. (Os03t0352300-03)
Sequence	MALYLLFESASGYGLFHAYGIDEIGQSVDAVRASVVDLDRFGKAVKLAAFTPFSSAVDAL NQCNAISEGIMTDELRSFLELNLPKPKEGKKAKYSLGVVEPKVGSHISEVTGIPCQSNEF VQELLRGVRLHFDRFISELKKSDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDT LDKDINSFSMRVREWFGWHFPELVKIVNDNYIYAKLADYIKDKSELAEKDISKLADLIGD EDKAKEVVEAAKASMGQDLSEVDLMNVKQFAQRVMNLSEYRKNLYEYLVTKMNDIAPNLT SLIGEVVGARLISHAGSLSNLAKCPASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFI GRASTKNKGRMARYLANKCSIASRIDCYSESATAVFGQKLREQVEERLDFYDKGVAPRKN LDVMKAAIDSMVNDATNDVDDGEKVDASAKKSKKKKSKAEADGEAMDLDKPSNVADEAEP GTEKKKKKKKHKLEEEPQEQEKSVAHANGDAEENGTPKKKKKKNREVSEDAEPKTATEGK KKKKKSKTEDSD

Transcript Sequence

Transcript ID	Os03t0352300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:13222688:13225476:-1 gene:Os03g0352300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nucleolar protein. (Os03t0352300-01);Similar to nucleolar protein Nop56. (Os03t0352300-02);Similar to nucleolar protein Nop56. (Os03t0352300-03)
Sequence	TCCCCTCGCTCCCCTAAAACCCTAACCCCCCTTCCGCCGCCGCCCCCAAACCTCAACCCG CCGCCGCCGCCGACGCCGCCGGCGAGATGGCGCTGTACCTGCTCTTCGAGTCGGCGTCCG GCTACGGCCTCTTCCACGCCTACGGCATCGACGAGATCGGGCAGAGCGTGGACGCCGTCC GCGCCTCCGTCGTCGACCTCGACCGCTTCGGCAAGGCCGTCAAGCTCGCCGCCTTCACCC CCTTCTCCTCCGCCGTGGACGCCCTCAACCAGTGCAACGCCATCTCCGAAGGGATCATGA CCGACGAGCTGAGGAGCTTCCTGGAGCTGAACCTGCCCAAGCCCAAGGAGGGGAAGAAGG CCAAGTACAGCCTCGGCGTCGTCGAGCCCAAGGTCGGCTCCCACATCTCCGAGGTCACCG GCATCCCGTGCCAGAGCAACGAGTTCGTCCAGGAGCTTCTCCGCGGCGTCCGCCTCCACT TCGACCGCTTCATCAGCGAGCTCAAGAAATCGGACTTGGAGAAGGCGCAGCTTGGCCTGG GTCATAGCTACAGCAGGGCGAAGGTGAAGTTCAATGTGAACCGCGTTGACAACATGGTGA TTCAGGCTATCTTCCTGTTGGATACACTTGACAAGGACATCAATTCTTTCTCCATGAGAG TGAGGGAATGGTTTGGATGGCATTTTCCTGAGTTGGTCAAAATTGTCAATGACAACTACA TCTATGCTAAGCTTGCTGATTATATAAAGGACAAATCTGAGTTGGCGGAAAAAGATATTT CGAAGTTAGCTGATCTGATTGGAGATGAAGATAAGGCAAAAGAAGTTGTCGAAGCAGCAA AGGCTTCAATGGGTCAGGATCTGTCAGAAGTTGATTTGATGAATGTGAAGCAGTTTGCTC AAAGAGTCATGAATCTGTCTGAATATCGTAAAAACCTTTATGAGTATCTTGTTACCAAGA TGAATGATATTGCACCGAATCTAACATCATTAATTGGTGAAGTTGTTGGAGCACGCCTTA TCTCTCATGCTGGCAGTCTTTCAAACCTTGCTAAGTGTCCTGCCTCCACTCTCCAGATAC TTGGTGCTGAAAAGGCACTTTTCAGGGCATTGAAAACTAGGGGGAATACGCCAAAGTATG GCCTTATATTCCACTCATCCTTCATTGGCCGTGCTTCAACCAAGAACAAAGGCAGAATGG CTAGATATCTGGCGAACAAGTGCTCCATTGCATCACGCATTGATTGTTATTCAGAGTCAG CTACCGCAGTCTTTGGGCAAAAGCTTCGTGAGCAAGTTGAGGAGCGGTTAGACTTCTATG ACAAGGGTGTTGCACCTCGTAAAAACCTTGATGTGATGAAAGCTGCGATAGACAGCATGG TTAATGATGCCACAAATGATGTTGATGATGGCGAGAAGGTCGATGCATCTGCCAAGAAAA GTAAGAAAAAGAAGTCTAAAGCTGAAGCTGACGGCGAAGCAATGGACCTGGACAAGCCTT CCAATGTGGCTGATGAAGCTGAGCCTGGAACTGAGAAGAAGAAAAAGAAGAAGAAGCACA AGCTGGAGGAGGAGCCACAGGAGCAGGAGAAGAGCGTGGCGCATGCCAATGGCGACGCCG AGGAGAACGGTACTCCCAAGAAGAAGAAGAAGAAGAACCGTGAAGTCTCGGAGGACGCTG AGCCTAAGACGGCCACTGAAGGGAAGAAGAAAAAGAAGAAGTCCAAGACGGAGGACAGCG ACTGAGTGATCGGTTTGCCTACTTGCATGGCTGATCTTTCTGATTAGTGTTGTTGGAAGC AGAGTTAAAAAAAACACCTAGATTCCTAGTTCCTG