Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0350300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:13133569:13137486:-1 gene:Os03g0350300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 102, BRI1-interacting protein 102, brassinosteroid receptor kinase-interacting protein 102 description:Similar to SAR DNA-binding protein-like protein. (Os03t0350300-01)
Sequence	ATGCTGGTGCTGTTCGAGACGCCCGCGGGGTTCGCCCTCTTCAAGGTGCTCGACGAAGGG AAGCTCGACAAGGTCGAGGATTTATGGAAGGAGTTCACGACGTCTGACTCGGCGAGAAAG GTGGTCGAGCTGAAGGCTTTCAACAAGTTTGAGAACACCTCCGATGCCCTTTCAGCTGCA ACCCTCATTATTGACAGCAAGCCTACCAAGGGTTTGCGCAAATTCTTGCAGAAGCACTGT GAGGGTGAAACGTTAGCTGTAGCTGACTCTAAACTTGGAAATGCTATAAAGGAGAAGCTG AAAATTGATTGCCTTCATAACAGTGCTGTGATGGAGCTCATGAGAGGGTTAAGGAACCAG CTCACTGAACTTATATCTGGTTTGGGTGCACAAGACCTTGGTCCAATGAGCCTTGGATTG TCCCACAGCCTGTCTAGATATAAGCTGAAGTTCAGTCCTGAAAAGGTTGATACTATGATC ATTCAGGCCATTGGATTATTGGATGATCTTGATAAGGAGCTCAACACTTACGCCATGAGG GTTCGTGAATGGTATGGGTGGCACTTCCCAGAGCTCACTAAAATTGTAGCTGATAACATA CAGTACGCAAAAGTTGTGAAGATGATGGGTGATCGGACTAACGCAGAAAGCCTTGATTTC TCTGAGATACTCTCAGATGATGAGGTTGAAGCACAGTTAAAAGAGGCGGCAGTAATATCC ATGGGAACAGAAGTTAGTGAACTTGATTTGCTAAATATCAGGGAGCTGTGTGATCAGGTG TTGGCTCTTTCTGAGTACAGAGCCCAGCTGTTTGATTATCTGAGAAGCAGGATGAACACT ATCGCACCAAATTTGACTGCACTTGTGGGCGAATTGGTTGGTGCTCGACTTATTGCACAC GGTGGCAGTTTGGTAAATCTGGCCAAGCAGCCGGGCAGCACAATTCAGATACTTGGTGCA GAGAAGGCTTTGTTCAGAGCTCTCAAGACAAAACATGCTACGCCGAAGTATGGTCTCATT TACCATGCATCCCTAATTGGTCAAGCAGCTCCAAAGCACAAGGGAAAGATTTCTCGTTCT CTTGCAGCAAAAACTGCTCTTGCCATTCGGTATGATGCCCTTGGTGATGGTGAAGACAAC TCCATTGGTCTAGAGAGTCGAGTCAAGCTTGAGACGCGGCTTCGTGTTCTCGAGGGTAAA GAACTTGGCAGGTCTGCAGGTTCCACTAAAGGAAAGCCCAAGATAGAAGTGTATGAAAAG GACCGGAAGAAGGGTGCTGGGGCTTTAATCACTCCTGCTAAGACATACAATCCTGCGGCT GATCTGGTACTTGGACAATCCACTGAAGAAACTCCAAAGAAGCCTGAAGGTGCTTCGAAG AAGAGGAAACATCAAGAGACGGAGCCTGCACCAGCAGAGAAGACCACTAAAGAGGATGGT GACCAAGAAGGTGAAAAGAAAAAGAAGAAAAAGAAGTCCAAAGAGAGCGAGGAATCTCCT GCGGCCGATGCTGACGGTGGCAAGAAAAAGAAAAAGACGTCCAAGGAGAGCGAGGAACCT CCAGTGGCCACTACAGAAGGTGAGAAGAAGGAGAAGAAGAAAAAGAAGAAATCTGATTCA CAAGATGCCGAGGATGTTGCCATGGAAACCGAGGAGTCTGGCAAGAAAGAGAAGAAGAAA AAGAAGAAACACCATAGCGATGAATGA

Peptide Sequence

PEP ID	Os03t0350300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:13133569:13137486:-1 gene:Os03g0350300 transcript:Os03t0350300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 102, BRI1-interacting protein 102, brassinosteroid receptor kinase-interacting protein 102 description:Similar to SAR DNA-binding protein-like protein. (Os03t0350300-01)
Sequence	MLVLFETPAGFALFKVLDEGKLDKVEDLWKEFTTSDSARKVVELKAFNKFENTSDALSAA TLIIDSKPTKGLRKFLQKHCEGETLAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQ LTELISGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMR VREWYGWHFPELTKIVADNIQYAKVVKMMGDRTNAESLDFSEILSDDEVEAQLKEAAVIS MGTEVSELDLLNIRELCDQVLALSEYRAQLFDYLRSRMNTIAPNLTALVGELVGARLIAH GGSLVNLAKQPGSTIQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKHKGKISRS LAAKTALAIRYDALGDGEDNSIGLESRVKLETRLRVLEGKELGRSAGSTKGKPKIEVYEK DRKKGAGALITPAKTYNPAADLVLGQSTEETPKKPEGASKKRKHQETEPAPAEKTTKEDG DQEGEKKKKKKKSKESEESPAADADGGKKKKKTSKESEEPPVATTEGEKKEKKKKKKSDS QDAEDVAMETEESGKKEKKKKKKHHSDE

Transcript Sequence

Transcript ID	Os03t0350300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:13133569:13137486:-1 gene:Os03g0350300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 102, BRI1-interacting protein 102, brassinosteroid receptor kinase-interacting protein 102 description:Similar to SAR DNA-binding protein-like protein. (Os03t0350300-01)
Sequence	CTCGCCGCCGGCACCCCCTCTCCCGCCGCATCCCACAACACCTCGCTCTAAACCCTCGCG GCGGCGGCGGCGGCGGCGGCGCCTACTCCCCCTCCCCACCATCTCGCCGCAGCCGGACCT TCGCCTCGCGCTCTCCTCCCCCCATCGTCGATTCGCGTCCAATCGAGCCAAGGTGTAGGT GTTCTCGTGCGGTGAGAGAGATGCTGGTGCTGTTCGAGACGCCCGCGGGGTTCGCCCTCT TCAAGGTGCTCGACGAAGGGAAGCTCGACAAGGTCGAGGATTTATGGAAGGAGTTCACGA CGTCTGACTCGGCGAGAAAGGTGGTCGAGCTGAAGGCTTTCAACAAGTTTGAGAACACCT CCGATGCCCTTTCAGCTGCAACCCTCATTATTGACAGCAAGCCTACCAAGGGTTTGCGCA AATTCTTGCAGAAGCACTGTGAGGGTGAAACGTTAGCTGTAGCTGACTCTAAACTTGGAA ATGCTATAAAGGAGAAGCTGAAAATTGATTGCCTTCATAACAGTGCTGTGATGGAGCTCA TGAGAGGGTTAAGGAACCAGCTCACTGAACTTATATCTGGTTTGGGTGCACAAGACCTTG GTCCAATGAGCCTTGGATTGTCCCACAGCCTGTCTAGATATAAGCTGAAGTTCAGTCCTG AAAAGGTTGATACTATGATCATTCAGGCCATTGGATTATTGGATGATCTTGATAAGGAGC TCAACACTTACGCCATGAGGGTTCGTGAATGGTATGGGTGGCACTTCCCAGAGCTCACTA AAATTGTAGCTGATAACATACAGTACGCAAAAGTTGTGAAGATGATGGGTGATCGGACTA ACGCAGAAAGCCTTGATTTCTCTGAGATACTCTCAGATGATGAGGTTGAAGCACAGTTAA AAGAGGCGGCAGTAATATCCATGGGAACAGAAGTTAGTGAACTTGATTTGCTAAATATCA GGGAGCTGTGTGATCAGGTGTTGGCTCTTTCTGAGTACAGAGCCCAGCTGTTTGATTATC TGAGAAGCAGGATGAACACTATCGCACCAAATTTGACTGCACTTGTGGGCGAATTGGTTG GTGCTCGACTTATTGCACACGGTGGCAGTTTGGTAAATCTGGCCAAGCAGCCGGGCAGCA CAATTCAGATACTTGGTGCAGAGAAGGCTTTGTTCAGAGCTCTCAAGACAAAACATGCTA CGCCGAAGTATGGTCTCATTTACCATGCATCCCTAATTGGTCAAGCAGCTCCAAAGCACA AGGGAAAGATTTCTCGTTCTCTTGCAGCAAAAACTGCTCTTGCCATTCGGTATGATGCCC TTGGTGATGGTGAAGACAACTCCATTGGTCTAGAGAGTCGAGTCAAGCTTGAGACGCGGC TTCGTGTTCTCGAGGGTAAAGAACTTGGCAGGTCTGCAGGTTCCACTAAAGGAAAGCCCA AGATAGAAGTGTATGAAAAGGACCGGAAGAAGGGTGCTGGGGCTTTAATCACTCCTGCTA AGACATACAATCCTGCGGCTGATCTGGTACTTGGACAATCCACTGAAGAAACTCCAAAGA AGCCTGAAGGTGCTTCGAAGAAGAGGAAACATCAAGAGACGGAGCCTGCACCAGCAGAGA AGACCACTAAAGAGGATGGTGACCAAGAAGGTGAAAAGAAAAAGAAGAAAAAGAAGTCCA AAGAGAGCGAGGAATCTCCTGCGGCCGATGCTGACGGTGGCAAGAAAAAGAAAAAGACGT CCAAGGAGAGCGAGGAACCTCCAGTGGCCACTACAGAAGGTGAGAAGAAGGAGAAGAAGA AAAAGAAGAAATCTGATTCACAAGATGCCGAGGATGTTGCCATGGAAACCGAGGAGTCTG GCAAGAAAGAGAAGAAGAAAAAGAAGAAACACCATAGCGATGAATGAAGGATACACTGGA GAAGGACATGTTATCTTGAGTAGCATAGGGTTGAAGAATCGCTGCTCTGTAAAATGCAAC ATTCCGAGTTTTTCCATGCCGGTTAGTTGTAGGATAGGCATCAAGTTTGGACTTGTTACT CATGGATCTTGTATTCAATTGCCTACTGAATTTTGGAATTGGAGAGCATATGATGCTTTT GCTCATTCTATGTGAACTAAAGTTTCTTGTCCTTTTGGCTGGCC