Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0345100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:12865230:12869288:-1 gene:Os03g0345100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin response factor 75 description:Similar to auxin response factor 75. (Os03t0345100-01)
Sequence

GTTTCCCTCCCCCCGAGTCGAGGCGAGCTGAGACGAAGCGCGGCGGCGCTGGAGCTGTCT
ATGAGCGGCGGCGCGCTGCGGACGTTCACGCGGTGCGTCACCTGCCTCGCGCGCGTCGGC
TCCGACCTCGTCCTCCAGGCCCACCCCGCCAAGCTTGAGCTGCACACGCTCAACAGCTCG
CGGTCGGCGTACGCGTCCATCTCGCTGGCGCGGGACTTCTTCGACGAGTTCAGCCTCTCC
GCCGCCGCCGCCGCCGACTCGGCGCCGTCGTCGACGCCGCTCCAGTGCAGCGTCCTCCTC
AAGTCCGCCTCCCTCCCCAACCCCGACGCGCCCAAGCTCCAGCTCACCCTCCACTGCCTC
AACGGGGTGAAGAAGACGTACTGGATCGCGTGCAGCGCGGAGTCCGAGGTGCAGACGCTG
GCGCTCGACCGCAGCAACTTCTCCAGCCGCCTCGCCATCCGGCCGCGGGACCTGGCGCGC
CTGCTCTCCAATTTCCAGTCCTCGCTGCAGGAGCTCACGGTTATTGCCACCGATCCTGCT
GCTGGGCTCTCCAACGTCGGCGTGGATGGTGAGATTGAGGGGAAGGCTGTCGAGCTCAGA
AGCTACATTGACCCGACGAAAGATGACTGCGATACGAGGCTGCACACGCAGCTGTGGATT
GACCCAACAGAGGAGTTCGTGGAGTATGTACATTCCGGTGATTCAGTGGATGTCACATTC
GGGGTGAAAGAACTCAAGGCTTTCTTAACATTTTGTGAAGGATGTGAAGTTGATATCCTC
CTATTCTTTCAGAAGGCTGGCGAGCCTGTCCTTTTGGTTCCCAAATTTGGGCTTGACGAT
GGATCAAGTTCTGATTTTGATGCAACACTAGTTCTTGCCACTATGCTTGTATCACAACTT
ACTGACAGCAGTGTTGCCCAACAGCCAACTACTTCTGCACAGCGAGCAGAAGAACCAAGG
GTTGCTGCTACACCACCACCAGTCCCTGAAAATGTCTCAAACCATACTAAAATATGGTCG
GAGCTATCAGGTAGTGCTCCCAAAAGTTTTGAAGTTAACAGAGAAAAATACACCCAGAAG
GAGAGAAATGCCAATTCTAATGCACTGAATGACACATCAATGCTGCATAGTGTAAATGCT
CGCTACAAGCCACCAGTCGCTGATAATGCAAACGATACAATGCAGCCTATGCAAATGGAT
CACTTGGAAGAGCCTCCTGATGTTGTCAGTGATAATCCTCGATCACAGCATCACCCAAGC
AATTGGGTAGGTGCTGATGAAGATGACGATGATGACGAAGATGAGGAGCTTTTCGTCCAA
ACAACACCGCACTACATGGACTAG

Peptide Sequence

PEP ID

Os03t0345100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:12865230:12869288:-1 gene:Os03g0345100 transcript:Os03t0345100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin response factor 75 description:Similar to auxin response factor 75. (Os03t0345100-01)
Sequence

VSLPPSRGELRRSAAALELSMSGGALRTFTRCVTCLARVGSDLVLQAHPAKLELHTLNSS
RSAYASISLARDFFDEFSLSAAAAADSAPSSTPLQCSVLLKSASLPNPDAPKLQLTLHCL
NGVKKTYWIACSAESEVQTLALDRSNFSSRLAIRPRDLARLLSNFQSSLQELTVIATDPA
AGLSNVGVDGEIEGKAVELRSYIDPTKDDCDTRLHTQLWIDPTEEFVEYVHSGDSVDVTF
GVKELKAFLTFCEGCEVDILLFFQKAGEPVLLVPKFGLDDGSSSDFDATLVLATMLVSQL
TDSSVAQQPTTSAQRAEEPRVAATPPPVPENVSNHTKIWSELSGSAPKSFEVNREKYTQK
ERNANSNALNDTSMLHSVNARYKPPVADNANDTMQPMQMDHLEEPPDVVSDNPRSQHHPS
NWVGADEDDDDDEDEELFVQTTPHYMD

Transcript Sequence

Transcript ID

Os03t0345100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12865230:12869288:-1 gene:Os03g0345100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin response factor 75 description:Similar to auxin response factor 75. (Os03t0345100-01)
Sequence

GGTTTCCCTCCCCCCGAGTCGAGGCGAGCTGAGACGAAGCGCGGCGGCGCTGGAGCTGTC
TATGAGCGGCGGCGCGCTGCGGACGTTCACGCGGTGCGTCACCTGCCTCGCGCGCGTCGG
CTCCGACCTCGTCCTCCAGGCCCACCCCGCCAAGCTTGAGCTGCACACGCTCAACAGCTC
GCGGTCGGCGTACGCGTCCATCTCGCTGGCGCGGGACTTCTTCGACGAGTTCAGCCTCTC
CGCCGCCGCCGCCGCCGACTCGGCGCCGTCGTCGACGCCGCTCCAGTGCAGCGTCCTCCT
CAAGTCCGCCTCCCTCCCCAACCCCGACGCGCCCAAGCTCCAGCTCACCCTCCACTGCCT
CAACGGGGTGAAGAAGACGTACTGGATCGCGTGCAGCGCGGAGTCCGAGGTGCAGACGCT
GGCGCTCGACCGCAGCAACTTCTCCAGCCGCCTCGCCATCCGGCCGCGGGACCTGGCGCG
CCTGCTCTCCAATTTCCAGTCCTCGCTGCAGGAGCTCACGGTTATTGCCACCGATCCTGC
TGCTGGGCTCTCCAACGTCGGCGTGGATGGTGAGATTGAGGGGAAGGCTGTCGAGCTCAG
AAGCTACATTGACCCGACGAAAGATGACTGCGATACGAGGCTGCACACGCAGCTGTGGAT
TGACCCAACAGAGGAGTTCGTGGAGTATGTACATTCCGGTGATTCAGTGGATGTCACATT
CGGGGTGAAAGAACTCAAGGCTTTCTTAACATTTTGTGAAGGATGTGAAGTTGATATCCT
CCTATTCTTTCAGAAGGCTGGCGAGCCTGTCCTTTTGGTTCCCAAATTTGGGCTTGACGA
TGGATCAAGTTCTGATTTTGATGCAACACTAGTTCTTGCCACTATGCTTGTATCACAACT
TACTGACAGCAGTGTTGCCCAACAGCCAACTACTTCTGCACAGCGAGCAGAAGAACCAAG
GGTTGCTGCTACACCACCACCAGTCCCTGAAAATGTCTCAAACCATACTAAAATATGGTC
GGAGCTATCAGGTAGTGCTCCCAAAAGTTTTGAAGTTAACAGAGAAAAATACACCCAGAA
GGAGAGAAATGCCAATTCTAATGCACTGAATGACACATCAATGCTGCATAGTGTAAATGC
TCGCTACAAGCCACCAGTCGCTGATAATGCAAACGATACAATGCAGCCTATGCAAATGGA
TCACTTGGAAGAGCCTCCTGATGTTGTCAGTGATAATCCTCGATCACAGCATCACCCAAG
CAATTGGGTAGGTGCTGATGAAGATGACGATGATGACGAAGATGAGGAGCTTTTCGTCCA
AACAACACCGCACTACATGGACTAGGGATCGATGCTGATCCTTATACTTTAGGTACATAT
CAGGCTATCAGCCCGATGCAAAGAGAATGGACTAGAAACTAGTTAAGTACCTTTCTCTTT
GCTCTTAGTTCTTTCAGGCCTGAAGTTAACACAGAATATGTTAATCTTTTTAACAATGTG
ACTTGTTTGTATCCGATGTGGCTATGGCATTTCTCATAGTGCAGAGATTTTTTTTATG