Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0344900-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:12854376:12859361:-1 gene:Os03g0344900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Clp protease 5, CLP PROTEASE 5 description:Similar to ATP-dependent Clp protease proteolytic subunit. (Os03t0344900-00)
Sequence	ATGGCGTCCGCCTCCCTGTCGCTCCGCCTCCCCACGCCCTCCACTGCACCTTCCTCCGGG GCCTCCTCCTCGTTCCTCTCCCTGCCTCCGACCTTGCTCCGCCAGGCGCGGGGTGGCGCG GCGGCGTCCTCCGCGCTGGTGGCGCGGGCGGCGTCGGGGGGGAGCCCGAACCCGCTCTTC AACCCGAGGGCCGACCCGTTCCTGTCCACCCTCGCCGCCGCCTCGCCGGAGGAGCTCCAG GCTGCGGCGGCAGGTGGCGGGCGCCGCGGCGACGACCACCTGCCGTTCCTCGAGATCTTC CAGAACGCCAAGCTCATGGCCTCGCCCGCGCAGGTGGAACGATCTAGCAGTTCTTACAGC CAGCACAGGCCTAGAAGGCCTCCCCCTGACTTGCCATCATTGCTTCTTCATGGCCGAATT GTTTACATTGGCATGCCGTTGGTGCCAGCAGTTACAGAGCTTGTCGTTGCGCAGTTGATG TACCTTGAGTGGATGAATAGTAAAGAACCTGTTTACATATACATCAACTCCACAGGAACA GCTCGTGATGATGGTGAACCAGTTGGAATGGAGAGTGAAGGTTTTGCTATCTATGATGCC ATGATGCGGATGAAAACTGAGATCCATACACTTTGTATAGGAGCTGCGGCAGGTCATGCC TGTCTTGTACTTGCAGCAGGAAAGAAAGGAAAACGCTATATGTTCCCTCATGCCAAAGCT ATGATTCAGCAACCTCGTATCCCTTCATATGGAATGATGCAAGCATCTGATGTTGTTATT CGGGCGAAAGAGGTTGTGCACAACAGGAACACCTTAGTGAGACTTTTAGCAAGGCACACG GGGAATCCACCAGAGAAAATAGACAAGGTGATGAGAGGACCATTTTATATGGATTCCTTG AAGGCAAAGGAGTTTGGTGTCATTGACAAGATCCTTTGGCGTGGTCAAGAGAAGTACATG GCTGACATGCTCTCCCCAGAGGAATGGGACAAAGTTGCTGGAGTCAGACGCCCTGATATT ATGTGA

Peptide Sequence

PEP ID	Os03t0344900-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:12854376:12859361:-1 gene:Os03g0344900 transcript:Os03t0344900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Clp protease 5, CLP PROTEASE 5 description:Similar to ATP-dependent Clp protease proteolytic subunit. (Os03t0344900-00)
Sequence	MASASLSLRLPTPSTAPSSGASSSFLSLPPTLLRQARGGAAASSALVARAASGGSPNPLF NPRADPFLSTLAAASPEELQAAAAGGGRRGDDHLPFLEIFQNAKLMASPAQVERSSSSYS QHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGT ARDDGEPVGMESEGFAIYDAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKA MIQQPRIPSYGMMQASDVVIRAKEVVHNRNTLVRLLARHTGNPPEKIDKVMRGPFYMDSL KAKEFGVIDKILWRGQEKYMADMLSPEEWDKVAGVRRPDIM

Transcript Sequence

Transcript ID	Os03t0344900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12854376:12859361:-1 gene:Os03g0344900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Clp protease 5, CLP PROTEASE 5 description:Similar to ATP-dependent Clp protease proteolytic subunit. (Os03t0344900-00)
Sequence	CCCCGAGCTCGAGCTCGCACGGCTGCCGCCGCCGAGCTCCGCCCGCCGCCATGGCGTCCG CCTCCCTGTCGCTCCGCCTCCCCACGCCCTCCACTGCACCTTCCTCCGGGGCCTCCTCCT CGTTCCTCTCCCTGCCTCCGACCTTGCTCCGCCAGGCGCGGGGTGGCGCGGCGGCGTCCT CCGCGCTGGTGGCGCGGGCGGCGTCGGGGGGGAGCCCGAACCCGCTCTTCAACCCGAGGG CCGACCCGTTCCTGTCCACCCTCGCCGCCGCCTCGCCGGAGGAGCTCCAGGCTGCGGCGG CAGGTGGCGGGCGCCGCGGCGACGACCACCTGCCGTTCCTCGAGATCTTCCAGAACGCCA AGCTCATGGCCTCGCCCGCGCAGGTGGAACGATCTAGCAGTTCTTACAGCCAGCACAGGC CTAGAAGGCCTCCCCCTGACTTGCCATCATTGCTTCTTCATGGCCGAATTGTTTACATTG GCATGCCGTTGGTGCCAGCAGTTACAGAGCTTGTCGTTGCGCAGTTGATGTACCTTGAGT GGATGAATAGTAAAGAACCTGTTTACATATACATCAACTCCACAGGAACAGCTCGTGATG ATGGTGAACCAGTTGGAATGGAGAGTGAAGGTTTTGCTATCTATGATGCCATGATGCGGA TGAAAACTGAGATCCATACACTTTGTATAGGAGCTGCGGCAGGTCATGCCTGTCTTGTAC TTGCAGCAGGAAAGAAAGGAAAACGCTATATGTTCCCTCATGCCAAAGCTATGATTCAGC AACCTCGTATCCCTTCATATGGAATGATGCAAGCATCTGATGTTGTTATTCGGGCGAAAG AGGTTGTGCACAACAGGAACACCTTAGTGAGACTTTTAGCAAGGCACACGGGGAATCCAC CAGAGAAAATAGACAAGGTGATGAGAGGACCATTTTATATGGATTCCTTGAAGGCAAAGG AGTTTGGTGTCATTGACAAGATCCTTTGGCGTGGTCAAGAGAAGTACATGGCTGACATGC TCTCCCCAGAGGAATGGGACAAAGTTGCTGGAGTCAGACGCCCTGATATTATGTGATGTT GTACATTGAAATTTTAAATTAGGTAAGATATCCTCCGTTGTTCTCAGCTGTCATCCAACA AGAATACCCCTCCGCTGTTCATTATAGGTGGTAAAAGCTCAGCGAAGTTCTTATTTACTG ATAAGCTAGATTAAAGCAGGAACCATCAAGGTACTCTGCATGATGTCTGAATCAGAGCTA GCAAGGTTATGCATTTTCTGGAGCAATTGATATTCCTCGCATCATTTCCACGTCAGATTT TGGTAGACATTGCTGGTATATAGTTTGGTAGTTTACACATTTGTTAGTAAACCTTGACGC GGTATCAACTGAGGTCCAAACATTATCAGCACGAA