Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0343400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:12794533:12797944:1 gene:Os03g0343400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHR2 description:Similar to Photolyase/blue-light receptor PHR2. (Os03t0343400-01)
Sequence	ATGGCCGCCGCCGCCTCCGACTCCGACTCCCCCGCCGCCGCCGCCGCTCGCCACCACGAC GACCCCACCCTCCCCGCATTCGCCTCCTTCTCGCTCTCCCTCTCCCTCCGCACCCCCGCC TCCCCCTCCCCGGCGGCGCTCGCCTCCGTCCCTTCCACCATCCACCTCCCCACCCAAATC TCCACGCTCGCCGTCTGCCTCCACCCCTCCGCCTCCGCCTCCGCGTCACCCTCCTCCCGC CGCCGCCTCAACGCCGCCGCCGCCGCGTCGTCGCTCCTCGCCCCGCTCCCGGCCTCCACG CCGGGCCTCTCCCGCTCCTTCCCTTCGGGCGCGCCCGCGGCGGCCGGGCGGCGCCGCACG CTCGTGTGGTTCCGCGCCGACCTCCGCCTCCACGACCACGAGCCCCTCCACGCCGCCGTC GGGGCGTCGTCGTCGCTGCTCCCGGTCTTCGTCTTCGACCCGCGCGACTTCGGCAAGTCC CCCTCGGGCTTCGACCGCACGGGGCCCTACCGCGCAGGCTTCCTGCTGGACTCCGTCGCC GACCTGCGCCGGGGCCTCCGCGCGCGCGGCGGCGACCTGGTGGTGCGCGTGGGGAGGCCC GAGGTGGTGATCCCCGAGCTCGCGCGCGCCGCCGGTGCGGAGGCCGTGTTCGCGCACGGC GAGGTGTCGCGCGACGAGTGCCGCGCCGAGGAGAAGGTGAGCAAGGCCGTTGAGAAGGAG GGAATCGAGGTCAAGTACTTCTGGGGCAGCACGCTGTACCACCTGGATGACCTGCCCTTC CGCCTCGAGGACATGCCGTCCAACTACGGTGGATTCAGGGAGGCTGTGAAGGGGTTGGAT GTCAGGAAGGTTCTCGACGCGCCGGAGGAGGTCAAGTGTGTTCCCATGAAGAATGTGCTT GAGCCCGGTGAGATCCCCACGCTTGCCGAGCTCGGCCTCACCGCGCCACCGGCCATGGCA CATGGCTCAAAAGCTGCTGTTGGTTCTACTCTCATTGGTGGTGAAGCTGAAGCTCTGGAG AGGTTGAAGAAGTTTGCTTCAGAATGTTGTATGCAGCCAAACAAAGGGGACAAGGACAGC ACTCGAGATAGCATATATGGTGCTAATTTCTCCTGCAAAATTTCACCATGGCTTGCTACA GGTTGCCTCTCACCGCGCTTCATGTATGAGGAGTTGAAGAAGCATGCTTCAAGAGCAATT CCATCGGGATCAACACCCAAGAATGGTGATGGCACATCTGATGCTGGTACAAATTGGTTA ATGTTCGAATTGCTATGGAGAGATTTCTTCAGGTTCATCACAAAGAAGTACAGTTCTGCA CAGAAGACCTCTGAAGTTGCTCCTGCCACTGGTTGCACCCCTACCCCAGCGCTTGCATAA

Peptide Sequence

PEP ID	Os03t0343400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:12794533:12797944:1 gene:Os03g0343400 transcript:Os03t0343400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHR2 description:Similar to Photolyase/blue-light receptor PHR2. (Os03t0343400-01)
Sequence	MAAAASDSDSPAAAAARHHDDPTLPAFASFSLSLSLRTPASPSPAALASVPSTIHLPTQI STLAVCLHPSASASASPSSRRRLNAAAAASSLLAPLPASTPGLSRSFPSGAPAAAGRRRT LVWFRADLRLHDHEPLHAAVGASSSLLPVFVFDPRDFGKSPSGFDRTGPYRAGFLLDSVA DLRRGLRARGGDLVVRVGRPEVVIPELARAAGAEAVFAHGEVSRDECRAEEKVSKAVEKE GIEVKYFWGSTLYHLDDLPFRLEDMPSNYGGFREAVKGLDVRKVLDAPEEVKCVPMKNVL EPGEIPTLAELGLTAPPAMAHGSKAAVGSTLIGGEAEALERLKKFASECCMQPNKGDKDS TRDSIYGANFSCKISPWLATGCLSPRFMYEELKKHASRAIPSGSTPKNGDGTSDAGTNWL MFELLWRDFFRFITKKYSSAQKTSEVAPATGCTPTPALA

Transcript Sequence

Transcript ID	Os03t0343400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12794533:12797944:1 gene:Os03g0343400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHR2 description:Similar to Photolyase/blue-light receptor PHR2. (Os03t0343400-01)
Sequence	ACCATCACTCCCACCAACCGCCACCCATGGCCGCCGCCGCCTCCGACTCCGACTCCCCCG CCGCCGCCGCCGCTCGCCACCACGACGACCCCACCCTCCCCGCATTCGCCTCCTTCTCGC TCTCCCTCTCCCTCCGCACCCCCGCCTCCCCCTCCCCGGCGGCGCTCGCCTCCGTCCCTT CCACCATCCACCTCCCCACCCAAATCTCCACGCTCGCCGTCTGCCTCCACCCCTCCGCCT CCGCCTCCGCGTCACCCTCCTCCCGCCGCCGCCTCAACGCCGCCGCCGCCGCGTCGTCGC TCCTCGCCCCGCTCCCGGCCTCCACGCCGGGCCTCTCCCGCTCCTTCCCTTCGGGCGCGC CCGCGGCGGCCGGGCGGCGCCGCACGCTCGTGTGGTTCCGCGCCGACCTCCGCCTCCACG ACCACGAGCCCCTCCACGCCGCCGTCGGGGCGTCGTCGTCGCTGCTCCCGGTCTTCGTCT TCGACCCGCGCGACTTCGGCAAGTCCCCCTCGGGCTTCGACCGCACGGGGCCCTACCGCG CAGGCTTCCTGCTGGACTCCGTCGCCGACCTGCGCCGGGGCCTCCGCGCGCGCGGCGGCG ACCTGGTGGTGCGCGTGGGGAGGCCCGAGGTGGTGATCCCCGAGCTCGCGCGCGCCGCCG GTGCGGAGGCCGTGTTCGCGCACGGCGAGGTGTCGCGCGACGAGTGCCGCGCCGAGGAGA AGGTGAGCAAGGCCGTTGAGAAGGAGGGAATCGAGGTCAAGTACTTCTGGGGCAGCACGC TGTACCACCTGGATGACCTGCCCTTCCGCCTCGAGGACATGCCGTCCAACTACGGTGGAT TCAGGGAGGCTGTGAAGGGGTTGGATGTCAGGAAGGTTCTCGACGCGCCGGAGGAGGTCA AGTGTGTTCCCATGAAGAATGTGCTTGAGCCCGGTGAGATCCCCACGCTTGCCGAGCTCG GCCTCACCGCGCCACCGGCCATGGCACATGGCTCAAAAGCTGCTGTTGGTTCTACTCTCA TTGGTGGTGAAGCTGAAGCTCTGGAGAGGTTGAAGAAGTTTGCTTCAGAATGTTGTATGC AGCCAAACAAAGGGGACAAGGACAGCACTCGAGATAGCATATATGGTGCTAATTTCTCCT GCAAAATTTCACCATGGCTTGCTACAGGTTGCCTCTCACCGCGCTTCATGTATGAGGAGT TGAAGAAGCATGCTTCAAGAGCAATTCCATCGGGATCAACACCCAAGAATGGTGATGGCA CATCTGATGCTGGTACAAATTGGTTAATGTTCGAATTGCTATGGAGAGATTTCTTCAGGT TCATCACAAAGAAGTACAGTTCTGCACAGAAGACCTCTGAAGTTGCTCCTGCCACTGGTT GCACCCCTACCCCAGCGCTTGCATAAACTAGATAGTCAATCTGAGAGGCGTCTGCCATTT TCCCCCCACCTTCTGTTTTGGCCAAATTATGCAGATATCTGATGGTGTGTTTTTTCCGCA ATAAATGTAACTAGTGAAGATGTCCTGAGTAAGCTGTTCCTGCATTTTGGACTAATTTGA TCTCAGAAGAGATCCTTTTGTATCTGTCGACATTCCTGCAAAGACAATTCAAGGGCACTG TGACCCAATCAAGTGCTTGGTTCAGTTTTGTTCATGAGTGTCGATATTCTCTGCCATCAT TTTAGTTGTAACATTGCATTGAGGAGACGAGGCACTGATGTTACCACAATTCAATCAGCT TTCTGTTGAGCTGAGTAACTGTCACGTCTAGCTTCATTGATGAACGGCTGTCGTGCGTTC