Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0343300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:12788382:12793276:1 gene:Os03g0343300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small-subunit processome, Utp14 domain containing protein. (Os03t0343300-01)
Sequence	ATGGCTGGGACGAAGCCCAGAGGGAAGCCGAAATCCAGGGCTCTGGTTGCCGGGGCAGCT CACGGGGGGAAGGAGAAGAAGGGCGTGACGGGCGGGGCGGGGAAGCGCGGGGACAGGCGC GGCGGCCGCCATGGCCCGCGCCTCCCCACGGCGCTGCGCCGGCAGCTCGACGCGCTGGGG CCCGGCACCTCGAGGGGTTCCGACGAGGACGAGGAGGCCGGGTCCGACGACGAGGGGGCA CACGACGTGTACGAGTACGAGGAAGGGGTCCCCGAGGAGGAGGCCGGGAAGAACGGCCGC TACGACGCCGTCGAGAAGTACGAGTACGAGTTCGACAGCGACGCCTCCAATGCGGATGAA GACGTGCCATCAGATGAAGGTGAGGATATGGAGGAAGATGATGCCGGCGAGGATGAAGAT GAGGAGAAGCAGATAAGAATACTTCAGGAGACGACTGGCATGCCTAGGGAAGCGTTTGAT GGGGGTAAGAGGAAGAAACAGCCATTGGAGCTGCCGTTTCAGCCTGGAGTTGGAGATGGT CCAGTCACAATTCATGATCTCTTGAATAATATTCAGGGTAAGCCTGGGTATAGCAAGCTC CGAAAGAGGCTGCAACAGCAGGAGAAAAAGCCAATAGTCGTGCAGGCCCCACTTGCAAAA GTGGAGAGAGAGAAGCTCGAGCGTGGTGTGGTATACCAGCAATCCAAGAAGGAGGTCACC AAGTGGGAGCCATTAGTTAAGAGGAACCGTGAGGCACCCACACTCTACTTTGAAAATGAT CTCAACTTAGGGGTTAACACAGTTGGGGCAATAGCTAGTGAATTTAAACCAAGAAATGAA TTTGAGAAGCAGATGGCTGAGATTATGCGTAGCACAGAAATGATGGAAGCACACAAGAAC GATGGTGTTAAAATACTGGAACTTAACAAGATTGACATGGAAGATGTGAGAGAACGTCAA AATCGACTTGCTAAAATGCGCAGCCTTCTGTTCCGTCATGAGATGAAAGCAAAACGGATA AAGAAGATCAAGTCCAGGACTTATCACCGGATGTTGAAAAAGGATAAACTGAAGGCAGCA TCAGCAGACTTTGAGGCAGATCCGGAAGCTGCCAAAGAGCATGCTATGAAACAGGAATTT AAACGTGCAGAGGAACGAATGAGATTAAAGCACAAGAATACTTCCAAATGGGCTAAGCGA ATCTTGAAGCGTGGATTGGATGTTCAAGATGAAGGCACTCGTGCTGCTATTGCAGCACAA CTCCAACAAAATGCTCTTCTTACTAGAAAAATGAATTCCACAAAAGACGATTCTAGTAGT AGTGAGGAAAGTTCTGATGATGAGGAAGATGACGATGAATCAGAAGCAAACATTCTGAAC AAAGGAAAAGAAAAGATTCTTAAAATTCTTGGGGATGATAATGAGATACCAACATCTGGA GTCTTTTCGTTGCCTTTCATGGAGCGCGCTATGAAGAAGCATGAGGAAGCAACTTATGAG GAAGCACGGCTAGCTCTAGAAGAGTGTGATGAATCATTGAGGAAATTGGAGGATGGTAAC ACTGAAGAGAATGGAGATTCAGTGAAGGTTACTGGTAAAAGAACTTTTGGACCTGCCGAA GATACAAACAAAGTGACAAATAAGAAGCAAAAATTAGATGACGGCGACAAGAACAGTGAT AGCGAATATGAGTCTGACTCTGCTCAACATCTGGATGACAATGAAGTACATAAGATAGAT GATGTGCAAATTGGGACTGCACTCCTGGATGATGATGAACCACAGGATGATCTGTTCAAA AGCTTCGATGATATTATAAAAAATCCTGGCCGCAAAACAACTGTTGAAGTTGGAATGTTA GCTGATAATTCATGGAAGAAGTTCAAGAGTAGCAAAGGAAATGATGGGAGCAATACCAAT GGTGATATAGATAAATCCACAGTGAAGGTTTCTTATATGGCAGACCAAAAGCTTAAGCAA TTGGATCACAATTCTGATTCAGATTCGGAGGATGAGATGGTTGAGGGTTTATTGACCATC TCCGATGCAAAGGAAAATTATAAAATTCCGTCGCAAGCTGATCTTATACGCCAGGCTTTT GCTGGTGATGATGTTGAGGCTGAATTTGAGAAGGACAAACTGGATGTTTTAAATGAAGAG AATCCTGAACCTGAAAAACCTGCTCTTGTTCCTGGTTGGGGACAGTGGACTGACATTCAA CAGAAAAAAGGACTTCCTTCTTGGATGGTGAAAGAACATGAAAATGCGAAAAGGAAGAGG GAAGAAGCCTTGAAGAGGAGGAAGGATGCTAAGCTCAAGCATGTTATCATTTCTGAACAT GTTGACAAGAAGGCTGAAAAGCTTTTAGTGAGGAATCTGCCTTTTCCTTACACTTCAAAG GATGTATATGAGCAGAGTATCCGTATGCCTATTGGACCTGATTTCAATCCAGCGATATCA GTTGCTGCTCTCAATCGACCTGCGATTGTTAAGAAGCCTGGAGTTGTTATCAAGCCAATA CAATATGAAGAGGTTGATCCCCATGAGAAGCCTGATGAACCGAAAAGGGTCATCCAGAGA GCTGTTCCAAACCCCAAAGCAAAGAGAACCTCTGCGAAGCAAGCAAAGGCGATAGCTTCA AATAAGAGGAAGTGA

Peptide Sequence

PEP ID	Os03t0343300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:12788382:12793276:1 gene:Os03g0343300 transcript:Os03t0343300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small-subunit processome, Utp14 domain containing protein. (Os03t0343300-01)
Sequence	MAGTKPRGKPKSRALVAGAAHGGKEKKGVTGGAGKRGDRRGGRHGPRLPTALRRQLDALG PGTSRGSDEDEEAGSDDEGAHDVYEYEEGVPEEEAGKNGRYDAVEKYEYEFDSDASNADE DVPSDEGEDMEEDDAGEDEDEEKQIRILQETTGMPREAFDGGKRKKQPLELPFQPGVGDG PVTIHDLLNNIQGKPGYSKLRKRLQQQEKKPIVVQAPLAKVEREKLERGVVYQQSKKEVT KWEPLVKRNREAPTLYFENDLNLGVNTVGAIASEFKPRNEFEKQMAEIMRSTEMMEAHKN DGVKILELNKIDMEDVRERQNRLAKMRSLLFRHEMKAKRIKKIKSRTYHRMLKKDKLKAA SADFEADPEAAKEHAMKQEFKRAEERMRLKHKNTSKWAKRILKRGLDVQDEGTRAAIAAQ LQQNALLTRKMNSTKDDSSSSEESSDDEEDDDESEANILNKGKEKILKILGDDNEIPTSG VFSLPFMERAMKKHEEATYEEARLALEECDESLRKLEDGNTEENGDSVKVTGKRTFGPAE DTNKVTNKKQKLDDGDKNSDSEYESDSAQHLDDNEVHKIDDVQIGTALLDDDEPQDDLFK SFDDIIKNPGRKTTVEVGMLADNSWKKFKSSKGNDGSNTNGDIDKSTVKVSYMADQKLKQ LDHNSDSDSEDEMVEGLLTISDAKENYKIPSQADLIRQAFAGDDVEAEFEKDKLDVLNEE NPEPEKPALVPGWGQWTDIQQKKGLPSWMVKEHENAKRKREEALKRRKDAKLKHVIISEH VDKKAEKLLVRNLPFPYTSKDVYEQSIRMPIGPDFNPAISVAALNRPAIVKKPGVVIKPI QYEEVDPHEKPDEPKRVIQRAVPNPKAKRTSAKQAKAIASNKRK

Transcript Sequence

Transcript ID	Os03t0343300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12788382:12793276:1 gene:Os03g0343300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small-subunit processome, Utp14 domain containing protein. (Os03t0343300-01)
Sequence	GACTTCCCACCCCCAAAACCCTCTTCGCGCCGCCGCCGCCGACGTGCTCGACCGATCCAC CGCCGAGGGAGAGAGAGAGCAGCTTCGCCGTCGCCATGGCTGGGACGAAGCCCAGAGGGA AGCCGAAATCCAGGGCTCTGGTTGCCGGGGCAGCTCACGGGGGGAAGGAGAAGAAGGGCG TGACGGGCGGGGCGGGGAAGCGCGGGGACAGGCGCGGCGGCCGCCATGGCCCGCGCCTCC CCACGGCGCTGCGCCGGCAGCTCGACGCGCTGGGGCCCGGCACCTCGAGGGGTTCCGACG AGGACGAGGAGGCCGGGTCCGACGACGAGGGGGCACACGACGTGTACGAGTACGAGGAAG GGGTCCCCGAGGAGGAGGCCGGGAAGAACGGCCGCTACGACGCCGTCGAGAAGTACGAGT ACGAGTTCGACAGCGACGCCTCCAATGCGGATGAAGACGTGCCATCAGATGAAGGTGAGG ATATGGAGGAAGATGATGCCGGCGAGGATGAAGATGAGGAGAAGCAGATAAGAATACTTC AGGAGACGACTGGCATGCCTAGGGAAGCGTTTGATGGGGGTAAGAGGAAGAAACAGCCAT TGGAGCTGCCGTTTCAGCCTGGAGTTGGAGATGGTCCAGTCACAATTCATGATCTCTTGA ATAATATTCAGGGTAAGCCTGGGTATAGCAAGCTCCGAAAGAGGCTGCAACAGCAGGAGA AAAAGCCAATAGTCGTGCAGGCCCCACTTGCAAAAGTGGAGAGAGAGAAGCTCGAGCGTG GTGTGGTATACCAGCAATCCAAGAAGGAGGTCACCAAGTGGGAGCCATTAGTTAAGAGGA ACCGTGAGGCACCCACACTCTACTTTGAAAATGATCTCAACTTAGGGGTTAACACAGTTG GGGCAATAGCTAGTGAATTTAAACCAAGAAATGAATTTGAGAAGCAGATGGCTGAGATTA TGCGTAGCACAGAAATGATGGAAGCACACAAGAACGATGGTGTTAAAATACTGGAACTTA ACAAGATTGACATGGAAGATGTGAGAGAACGTCAAAATCGACTTGCTAAAATGCGCAGCC TTCTGTTCCGTCATGAGATGAAAGCAAAACGGATAAAGAAGATCAAGTCCAGGACTTATC ACCGGATGTTGAAAAAGGATAAACTGAAGGCAGCATCAGCAGACTTTGAGGCAGATCCGG AAGCTGCCAAAGAGCATGCTATGAAACAGGAATTTAAACGTGCAGAGGAACGAATGAGAT TAAAGCACAAGAATACTTCCAAATGGGCTAAGCGAATCTTGAAGCGTGGATTGGATGTTC AAGATGAAGGCACTCGTGCTGCTATTGCAGCACAACTCCAACAAAATGCTCTTCTTACTA GAAAAATGAATTCCACAAAAGACGATTCTAGTAGTAGTGAGGAAAGTTCTGATGATGAGG AAGATGACGATGAATCAGAAGCAAACATTCTGAACAAAGGAAAAGAAAAGATTCTTAAAA TTCTTGGGGATGATAATGAGATACCAACATCTGGAGTCTTTTCGTTGCCTTTCATGGAGC GCGCTATGAAGAAGCATGAGGAAGCAACTTATGAGGAAGCACGGCTAGCTCTAGAAGAGT GTGATGAATCATTGAGGAAATTGGAGGATGGTAACACTGAAGAGAATGGAGATTCAGTGA AGGTTACTGGTAAAAGAACTTTTGGACCTGCCGAAGATACAAACAAAGTGACAAATAAGA AGCAAAAATTAGATGACGGCGACAAGAACAGTGATAGCGAATATGAGTCTGACTCTGCTC AACATCTGGATGACAATGAAGTACATAAGATAGATGATGTGCAAATTGGGACTGCACTCC TGGATGATGATGAACCACAGGATGATCTGTTCAAAAGCTTCGATGATATTATAAAAAATC CTGGCCGCAAAACAACTGTTGAAGTTGGAATGTTAGCTGATAATTCATGGAAGAAGTTCA AGAGTAGCAAAGGAAATGATGGGAGCAATACCAATGGTGATATAGATAAATCCACAGTGA AGGTTTCTTATATGGCAGACCAAAAGCTTAAGCAATTGGATCACAATTCTGATTCAGATT CGGAGGATGAGATGGTTGAGGGTTTATTGACCATCTCCGATGCAAAGGAAAATTATAAAA TTCCGTCGCAAGCTGATCTTATACGCCAGGCTTTTGCTGGTGATGATGTTGAGGCTGAAT TTGAGAAGGACAAACTGGATGTTTTAAATGAAGAGAATCCTGAACCTGAAAAACCTGCTC TTGTTCCTGGTTGGGGACAGTGGACTGACATTCAACAGAAAAAAGGACTTCCTTCTTGGA TGGTGAAAGAACATGAAAATGCGAAAAGGAAGAGGGAAGAAGCCTTGAAGAGGAGGAAGG ATGCTAAGCTCAAGCATGTTATCATTTCTGAACATGTTGACAAGAAGGCTGAAAAGCTTT TAGTGAGGAATCTGCCTTTTCCTTACACTTCAAAGGATGTATATGAGCAGAGTATCCGTA TGCCTATTGGACCTGATTTCAATCCAGCGATATCAGTTGCTGCTCTCAATCGACCTGCGA TTGTTAAGAAGCCTGGAGTTGTTATCAAGCCAATACAATATGAAGAGGTTGATCCCCATG AGAAGCCTGATGAACCGAAAAGGGTCATCCAGAGAGCTGTTCCAAACCCCAAAGCAAAGA GAACCTCTGCGAAGCAAGCAAAGGCGATAGCTTCAAATAAGAGGAAGTGATGGGACCTGG CAATACTTCCAACGTATAATCGTTCATTAGTTTGATGATGTAAAAGGTGAGAACATAGCA CCTAAAAGAAGAGGGAGGAGACACAAACATAACCGAGCTGATTTTCGTCGCGGCGAGTTT GAAACAAACACCTGGAAGTGTATAGGTATTCTCATCAAAATGAGAGGTTTGTATGGCTCA TGGAAAGTATGCGATTTGTGGCGCGTGGAAAGTATGTATGTTGCTGTAGTGCAGCAGTGA AATTTTGCTACACGGAGAGTCACTCTAACTCTAATTTGTTCTGTTTTGGCGCAGATATGA AGTAGAGTACTCTGTACTCATAAATTTTGTAACTCCCGGCAAGTGTTGTCCGGGCTGC