Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0342900-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:12766569:12768878:-1 gene:Os03g0342900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dormancyauxin associated family protein. (Os03t0342900-02);Dormancyauxin associated family protein. (Os03t0342900-04)
Sequence

ATGGGTCTCCTCGACAAGCTGTGGGACGACACCGTCGCGGGGCCCCGCCCCGACACCGGC
CTCGGCCGCCTCCGCAAGCACGCCGCCGCCCGCCCCGCCGCCGTCAAGATCAACGACCCG
ACAGGGGACGCGGCGATGGTGGCCGTCCCGCCGACGACGCCGGCCGGGGCGGAGGAGGCG
CCGGTGAAGGTGACGCGCAGCATCATGATCAAGCGCCCCGCGGGGTACCCGGCGTCGCCG
AGGAGCGCGGCCAGCACGCCGCCGGCCTCCCCCGCCGGATCCACCCCTCCCATCTCGCCG
TTCGCCGGCGCCGGTGGTCGCTTCAGAAGGAAATCATCGTCCGACGCATATGAGAGGGCA
ACACCTGGGACAACCAGTCACCCTCCTCCCTTTGAAGTGTGA

Peptide Sequence

PEP ID

Os03t0342900-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:12766569:12768878:-1 gene:Os03g0342900 transcript:Os03t0342900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dormancyauxin associated family protein. (Os03t0342900-02);Dormancyauxin associated family protein. (Os03t0342900-04)
Sequence

MGLLDKLWDDTVAGPRPDTGLGRLRKHAAARPAAVKINDPTGDAAMVAVPPTTPAGAEEA
PVKVTRSIMIKRPAGYPASPRSAASTPPASPAGSTPPISPFAGAGGRFRRKSSSDAYERA
TPGTTSHPPPFEV

Transcript Sequence

Transcript ID

Os03t0342900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12766569:12768878:-1 gene:Os03g0342900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dormancyauxin associated family protein. (Os03t0342900-02);Dormancyauxin associated family protein. (Os03t0342900-04)
Sequence

CTTCTCCCCAGATCCGAAGCGAGAAGCCTCTTTTGGATCTATCCATTCGGGTCACCGTGG
CAGTTCGGTAATTTTGGCGGAGAGGAGGAGGAGGACGACGACGACGACGACGTGATGGGT
CTCCTCGACAAGCTGTGGGACGACACCGTCGCGGGGCCCCGCCCCGACACCGGCCTCGGC
CGCCTCCGCAAGCACGCCGCCGCCCGCCCCGCCGCCGTCAAGATCAACGACCCGACAGGG
GACGCGGCGATGGTGGCCGTCCCGCCGACGACGCCGGCCGGGGCGGAGGAGGCGCCGGTG
AAGGTGACGCGCAGCATCATGATCAAGCGCCCCGCGGGGTACCCGGCGTCGCCGAGGAGC
GCGGCCAGCACGCCGCCGGCCTCCCCCGCCGGATCCACCCCTCCCATCTCGCCGTTCGCC
GGCGCCGGTGGTCGCTTCAGAAGGAAATCATCGTCCGACGCATATGAGAGGGCAACACCT
GGGACAACCAGTCACCCTCCTCCCTTTGAAGTGTGAGCCCCCAGCGTGCTCACGCTCGTT
TTTGCTCCTAGGCCAGCGTCTACTGCACACACAAGGCAGAGGAGGAGGAGAGACATATCA
GAGACCGAAGCGGATGGAAGTCGAGTGTTGTCTACCTATCTTACCTCTACTACTGTGATA
TAACGTAGATGCTACTAGTAATTAAGTACGCCTGCTGCTGCTCGCCGTCTACTATGTTGA
GTCGTGTATGGTTTGTGTAGTAAGGTTGTCGTCTGCTGTGTCATATATGTACATATGTTT
GCTCTGGGCTGCGATGGAGCTTGCTGCAGTCTGCAGCCAAGCCCGCAGTTCATCGCTGCG
TCGTGTTTTCGCGTCCTTTTAAGCCCTCTGCAACTATGTCAAATGGATGGGCATGTGGAG
GATGGTGGAATGAGCTTTCAGGCTGTGATGCTAAAGATGGAAGCACTGATGGCTGGTGTG
TGATTTTGCTTGATGTATTATCTGAATTCTCAAGTAGTAGATGCTTTGCTTG