Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0342100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:12753654:12754664:-1 gene:Os03g0342100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os03t0342100-01)
Sequence

ATGGCAGCGCCGACGTCCAAGAACCTTCTCCTCGTCCTCGTCGTGGCCGCCACCGCGGTC
GGCATCGTCGCGCCGCACGGCTCCGAGGCCGCGGCGGGTAGGGCTGTCACGGGCCTCGTC
ACCGGCGTAGTCCCGTGCAGCGCCGGGAGCTCCATCAACGCCGCGTCGGTCCCCGCGTTC
CCCGACGCCGGCGTGCAGATGGTGTGCGGCGGCAGGGTGGTGGGCGGCGCGACGGCGGAC
GGCACGGGGGCGTTCACCATCAACATGGGCGCGCTCAACGCGACGATGCTCATGGCCATG
GCCGGGAACCAGTGCAAGGTGGTGGTGACCACCCCGCTGGCGGCGTGCGACGCGTCCCTG
GCCGCCGTCGCCGGGACGCTCACGGCGCCGGTGCAGCTCCTCGGCGGCACCGGTGGCCTC
GGAGGGCTCGGCGGCCTCATCACCCTCATCACGCAGATCCTCAGTGGCCTCCTCGGCGAG
ATCCTCAACATCATCCCCTTGCCATTCTCCCTCGTCTAG

Peptide Sequence

PEP ID

Os03t0342100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:12753654:12754664:-1 gene:Os03g0342100 transcript:Os03t0342100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os03t0342100-01)
Sequence

MAAPTSKNLLLVLVVAATAVGIVAPHGSEAAAGRAVTGLVTGVVPCSAGSSINAASVPAF
PDAGVQMVCGGRVVGGATADGTGAFTINMGALNATMLMAMAGNQCKVVVTTPLAACDASL
AAVAGTLTAPVQLLGGTGGLGGLGGLITLITQILSGLLGEILNIIPLPFSLV

Transcript Sequence

Transcript ID

Os03t0342100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12753654:12754664:-1 gene:Os03g0342100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os03t0342100-01)
Sequence

ATCAGCACACACAGTCTCAGTGAGCTCAAGATAAGAGTATATTCACAGAGAAGAGATATC
TAGAGCGTGTGTGTGTGAGAGAGAGATAGGCATTCGTTCGATCTCGATCGATCACAGCTA
GCAATGGCAGCGCCGACGTCCAAGAACCTTCTCCTCGTCCTCGTCGTGGCCGCCACCGCG
GTCGGCATCGTCGCGCCGCACGGCTCCGAGGCCGCGGCGGGTAGGGCTGTCACGGGCCTC
GTCACCGGCGTAGTCCCGTGCAGCGCCGGGAGCTCCATCAACGCCGCGTCGGTCCCCGCG
TTCCCCGACGCCGGCGTGCAGATGGTGTGCGGCGGCAGGGTGGTGGGCGGCGCGACGGCG
GACGGCACGGGGGCGTTCACCATCAACATGGGCGCGCTCAACGCGACGATGCTCATGGCC
ATGGCCGGGAACCAGTGCAAGGTGGTGGTGACCACCCCGCTGGCGGCGTGCGACGCGTCC
CTGGCCGCCGTCGCCGGGACGCTCACGGCGCCGGTGCAGCTCCTCGGCGGCACCGGTGGC
CTCGGAGGGCTCGGCGGCCTCATCACCCTCATCACGCAGATCCTCAGTGGCCTCCTCGGC
GAGATCCTCAACATCATCCCCTTGCCATTCTCCCTCGTCTAGATCGATCGATCATCGATC
GCCTGCGCACAAACCTGCAGCCAGGCGGCGGCGTGTCAAATGGACGATGGATTATGATGA
TATTAATATGTAGTTAAGCATATAAATTAAATTAATACGTGTTTATATATAGCAACGGGG
CGGCCTAACTAATGCGTGGTCAATTAATTACCCTGCTGCTTTAGATTGTATATCGTGCCA
TGCGTCGTTTCTCTATGTATACCAGTTCATGTGGGCTTCTAAAATTATGCTATATATGTA
CTGTCTAATACT