Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0341600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:12739354:12740552:-1 gene:Os03g0341600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os03t0341600-01)
Sequence

ATGGCAAAGTCGTCGTCGTCGTCGATCAGGAGCCTTCTCCTCGCCGCCGCCCTCCTCGTC
GCCGTCGGCATCTCGCCGCACGCCGCGGAGGCTAGTAGTGGCGGCGCCGTCATGGGCCTC
GTCACCGGCGTAGTCCCGTGCAGCGCCGGGAGCTCCATCAACGCGGCGTCCGTTCCGGGA
TTCCCCAACGCCGCCGTGCAGCTGGAGTGCGGGGGCAGGGCGGTGGCCGGCGCGACGGCG
GACGGCAGCGGCGCGTTCGCCATCAACCTGGGGAAGCTCACCGCGGCGACGCTCACGCCG
CTGCTCAACGACAGGTGCCGCGTGGTCGTCACCACCCCGCTGGCCGCGTGCGACGCGTCG
CTCGCCGGCGTCGCCGGGACGCTGGCGGCGCCGGTGCAGCTCCTCGGCGACGGCGGCGCC
GGTGGCGGCGGCGCCCTCGGCGGCCTGGGCGGCCTCATCGGCGGCATCACCGGCATCATC
GGGCAGATCATCAGTGGCGTCCTCGGCAACATCATTAGCATCGTCCCATCGGCCTTCTCC
GTCGTCTAG

Peptide Sequence

PEP ID

Os03t0341600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:12739354:12740552:-1 gene:Os03g0341600 transcript:Os03t0341600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os03t0341600-01)
Sequence

MAKSSSSSIRSLLLAAALLVAVGISPHAAEASSGGAVMGLVTGVVPCSAGSSINAASVPG
FPNAAVQLECGGRAVAGATADGSGAFAINLGKLTAATLTPLLNDRCRVVVTTPLAACDAS
LAGVAGTLAAPVQLLGDGGAGGGGALGGLGGLIGGITGIIGQIISGVLGNIISIVPSAFS
VV

Transcript Sequence

Transcript ID

Os03t0341600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12739354:12740552:-1 gene:Os03g0341600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os03t0341600-01)
Sequence

GAGGCACGCAGCACAACACTGAGCGCTTGATCTGATCGAGCTAGCTATAGCAGCAGCCTC
GGTAGCTCTCGTACGCTAGTATAGCTAGCTAGCTCGCTAGCTCCGGTAGAAATGGCAAAG
TCGTCGTCGTCGTCGATCAGGAGCCTTCTCCTCGCCGCCGCCCTCCTCGTCGCCGTCGGC
ATCTCGCCGCACGCCGCGGAGGCTAGTAGTGGCGGCGCCGTCATGGGCCTCGTCACCGGC
GTAGTCCCGTGCAGCGCCGGGAGCTCCATCAACGCGGCGTCCGTTCCGGGATTCCCCAAC
GCCGCCGTGCAGCTGGAGTGCGGGGGCAGGGCGGTGGCCGGCGCGACGGCGGACGGCAGC
GGCGCGTTCGCCATCAACCTGGGGAAGCTCACCGCGGCGACGCTCACGCCGCTGCTCAAC
GACAGGTGCCGCGTGGTCGTCACCACCCCGCTGGCCGCGTGCGACGCGTCGCTCGCCGGC
GTCGCCGGGACGCTGGCGGCGCCGGTGCAGCTCCTCGGCGACGGCGGCGCCGGTGGCGGC
GGCGCCCTCGGCGGCCTGGGCGGCCTCATCGGCGGCATCACCGGCATCATCGGGCAGATC
ATCAGTGGCGTCCTCGGCAACATCATTAGCATCGTCCCATCGGCCTTCTCCGTCGTCTAG
ATCAACATCTGTGGCAGTTTAAGCACAAATTAACGGATTTGCTAGTCCCCAAATTAATCG
ATACGTGGCAGTATAATT