Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0341300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:12729779:12731404:1 gene:Os03g0341300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWEET16 description:Similar to Cytochrome c oxidoreductase. (Os03t0341300-01)
Sequence

ATGCTTGGCGTCGCCGATCGATCGACAGTTAAAAGAGAGGAATTCAATCGTGGTGATCAG
GCGAAGATGGTGAAGGTGGTGCTGGCCGTGAACGTGGGCGCGCTGGCGGCGGTGGTGGCG
GTGGCGCTGGTGGCGCTGCACGGCGGCGTGCGGCTGTTCGTGGTCGGCGTGCTGTGCGCG
GCGCTCACCATCGGCATGTACGCTGCGCCGATGGCCGCGATGAGGACGGTGGTGAAGACG
AGGAGCGTGGAGTACATGCCCTTCTCCCTCTCCTTCTTCCTCTTCCTCAACGGCGGCGTC
TGGAGCGTCTACTCCTTGCTCGTCAAGGACTACTTCATCGGAATTCCGAATGCAATCGGG
TTCGCGCTGGGGACGGCGCAGCTGGCGCTGTACATGGCGTACCGGAGGACGAAGAAGCCG
GCGGGGAAAGGCGGCGACGACGACGAGGACGACGAGGAGGCGCAGGGGGTGGCGCGGCTG
ATGGGGCATCAGGTGGAGATGGCGCAGCAGCGGAGGGACCAGCAGCTGCGCAAGGGGCTG
AGCCTGAGCCTGCCCAAGCCGGCGGCGCCGCTTCACGGGGGGCTCGACCGCATCATCAAG
TCCTTCTCCACCACCCCCATCGAGCTCCACTCCATCCTCCACCAGCACCACGGCGGCCAC
CACCACCACCACCGCTTCGACACCGTCCCCGACGACGACGACGAGGCGGTGGCCGCCGGG
GGCACCACGCCGGCTACGACAGCCGGTCCAGGAGATAGACATTAG

Peptide Sequence

PEP ID

Os03t0341300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:12729779:12731404:1 gene:Os03g0341300 transcript:Os03t0341300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWEET16 description:Similar to Cytochrome c oxidoreductase. (Os03t0341300-01)
Sequence

MLGVADRSTVKREEFNRGDQAKMVKVVLAVNVGALAAVVAVALVALHGGVRLFVVGVLCA
ALTIGMYAAPMAAMRTVVKTRSVEYMPFSLSFFLFLNGGVWSVYSLLVKDYFIGIPNAIG
FALGTAQLALYMAYRRTKKPAGKGGDDDEDDEEAQGVARLMGHQVEMAQQRRDQQLRKGL
SLSLPKPAAPLHGGLDRIIKSFSTTPIELHSILHQHHGGHHHHHRFDTVPDDDDEAVAAG
GTTPATTAGPGDRH

Transcript Sequence

Transcript ID

Os03t0341300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12729779:12731404:1 gene:Os03g0341300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWEET16 description:Similar to Cytochrome c oxidoreductase. (Os03t0341300-01)
Sequence

GTATATCTGACTCTGCATCCATATGCTTGGCGTCGCCGATCGATCGACAGTTAAAAGAGA
GGAATTCAATCGTGGTGATCAGGCGAAGATGGTGAAGGTGGTGCTGGCCGTGAACGTGGG
CGCGCTGGCGGCGGTGGTGGCGGTGGCGCTGGTGGCGCTGCACGGCGGCGTGCGGCTGTT
CGTGGTCGGCGTGCTGTGCGCGGCGCTCACCATCGGCATGTACGCTGCGCCGATGGCCGC
GATGAGGACGGTGGTGAAGACGAGGAGCGTGGAGTACATGCCCTTCTCCCTCTCCTTCTT
CCTCTTCCTCAACGGCGGCGTCTGGAGCGTCTACTCCTTGCTCGTCAAGGACTACTTCAT
CGGAATTCCGAATGCAATCGGGTTCGCGCTGGGGACGGCGCAGCTGGCGCTGTACATGGC
GTACCGGAGGACGAAGAAGCCGGCGGGGAAAGGCGGCGACGACGACGAGGACGACGAGGA
GGCGCAGGGGGTGGCGCGGCTGATGGGGCATCAGGTGGAGATGGCGCAGCAGCGGAGGGA
CCAGCAGCTGCGCAAGGGGCTGAGCCTGAGCCTGCCCAAGCCGGCGGCGCCGCTTCACGG
GGGGCTCGACCGCATCATCAAGTCCTTCTCCACCACCCCCATCGAGCTCCACTCCATCCT
CCACCAGCACCACGGCGGCCACCACCACCACCACCGCTTCGACACCGTCCCCGACGACGA
CGACGAGGCGGTGGCCGCCGGGGGCACCACGCCGGCTACGACAGCCGGTCCAGGAGATAG
ACATTAGAAAAAGTATTTTTCTCGATGTGGGGGTTTATTTTCGTAGTCGGATATGACCTT
TAGAGCCAAATGATCACATACGAAAATATAAATCGGGGTGAATTTTGATG