Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0341100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:12715987:12718369:-1 gene:Os03g0341100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L18. (Os03t0341100-01)
Sequence

ATGGGTATCGACCTCGTCGCCGGCGGCCGGAACAAGAAGACCAAGCGCACGGCGCCCAAG
TCCGACGATGTCTACCTCAAGCTCATCGTCAAGCTCTACCGCTTCCTGGTGCGGAGGACC
AAGAGCCCCTTCAACGCCGTGATCCTGAGGCGGCTCTTCATGAGCAAGACCAACCGCCCG
CCGCTCTCGCTCCGCCGCCTCGTCAGGTTCATGGAGGGCAAGGAGAACCAGATCGCCGTG
ATCGTGGGCACCGTTACCGACGACAAGAGGGTCTACGAGGTGCCGGCGATGAAGGTGGCC
GCGCTCAGGTTCACCGAGACCGCGAGGGCTCGCATTGTGAATACTGGTGGAGAGTGCCTT
ACCTTCGATCAGCTGGCGCTCCGCGCTCCTCTGGGCCAGAACACGGTTCTCCTGAGGGGT
CCTAAGAACGCCAGGGAAGCAGTGAAGCACTTTGGTCCTGCTCCTGGAGTGCCACACAGC
AACACCAAGCCTTACGTGCGCTCAAAGGGAAGGAAGTTTGAGAAGGCGAGAGGAAGGAGG
AACAGCAAAGGCTTCAAGGTCTAA

Peptide Sequence

PEP ID

Os03t0341100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:12715987:12718369:-1 gene:Os03g0341100 transcript:Os03t0341100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L18. (Os03t0341100-01)
Sequence

MGIDLVAGGRNKKTKRTAPKSDDVYLKLIVKLYRFLVRRTKSPFNAVILRRLFMSKTNRP
PLSLRRLVRFMEGKENQIAVIVGTVTDDKRVYEVPAMKVAALRFTETARARIVNTGGECL
TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRKFEKARGRR
NSKGFKV

Transcript Sequence

Transcript ID

Os03t0341100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12715987:12718369:-1 gene:Os03g0341100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L18. (Os03t0341100-01)
Sequence

CTAGAAGAAATCACCTCCCCCTCCGCCGCCGCACGCCGCCGCCATGGGTATCGACCTCGT
CGCCGGCGGCCGGAACAAGAAGACCAAGCGCACGGCGCCCAAGTCCGACGATGTCTACCT
CAAGCTCATCGTCAAGCTCTACCGCTTCCTGGTGCGGAGGACCAAGAGCCCCTTCAACGC
CGTGATCCTGAGGCGGCTCTTCATGAGCAAGACCAACCGCCCGCCGCTCTCGCTCCGCCG
CCTCGTCAGGTTCATGGAGGGCAAGGAGAACCAGATCGCCGTGATCGTGGGCACCGTTAC
CGACGACAAGAGGGTCTACGAGGTGCCGGCGATGAAGGTGGCCGCGCTCAGGTTCACCGA
GACCGCGAGGGCTCGCATTGTGAATACTGGTGGAGAGTGCCTTACCTTCGATCAGCTGGC
GCTCCGCGCTCCTCTGGGCCAGAACACGGTTCTCCTGAGGGGTCCTAAGAACGCCAGGGA
AGCAGTGAAGCACTTTGGTCCTGCTCCTGGAGTGCCACACAGCAACACCAAGCCTTACGT
GCGCTCAAAGGGAAGGAAGTTTGAGAAGGCGAGAGGAAGGAGGAACAGCAAAGGCTTCAA
GGTCTAAGTTATCGCCTGCTATTCGTGTGGTTGCACTGAATGGGCTACATAGCTCTTGTT
TGAGTTTCAGAGTTCTTGTGTTGTTATTACTCAAGTGCCAGGATCAGCTAAATTTTGTTC
GAATGTTATGCACTTTGAATCAGAGAATTACAAGCGTTGGCAGCACGTT