Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0340900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:12695305:12706384:1 gene:Os03g0340900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSH1 description:Similar to RSH1. (Os03t0340900-01)
Sequence	ATGCAACCCCCGACGGGCGCCGTGTCAGGGTCGTCGTCGTCGTCGCTGGAGTGCGTGAGC TCGTGCAGGACGTCGTGGAGGGGCGGAGGGAGGCCGTACGAATGCAGCGTGCTCTCGTGC GCCTGGAACGCGCCGCGGGCGCTCACGGGGGCGCTCGCCAGCACCACCGCGCAGTGCTCC TCCTGCAGCCACGCCGAGGCTGGGGCAGGGTGGAGGCGGCGGGGCCAGTCGCAGCGGAGT AACAATTCGTTACTGCACATAACCTGGGCAGAAGGCATCAACAGGGGGAAGTTTGGTTAT GGTTCATCAGCCCATTCTTTTCCCACTGGAAATTTTTTCAAATCTTGGTCAACTTCCGTG GATCCAACATGGAGAGTTTTCTGCTATTCATCATCTGAATCGTTCAATCATATTTCTCCA GAAACTTTGTGGGAGGATCTCAAGCCAGCTATCTCGTACCTTCAACCTGAAGAATTGAAC TTTGTACACGATGCTCTGAAGTTGGCATATGAGGCACATAATGGGCAGAAACGCCGAAGT GGGGAACCTTTCATTATTCATCCTGTTGAAGTTGCTCGTATCCTTGGGGAGCATGAACTT GACTGGGAATCAATAGCTGCTGGTTTATTGCATGACACTGTTGAAGATACAGACATGGTT ACTTTTGAAAGAATAGAAAATGAGTTTGGTGTAACCGTACGCCGTATTGTTGAAGGGGAG ACAAAGGTATCTAAGCTAGGAAAACTTCAGTGCAAAAATGAGGGTAATTCAAAACAGGAC GTCAAGGCTGAAGATTTAAGACAGATGTTTCTTGCCATGACAGAAGAGGTTCGTGTAATC ATTGTGAAACTGGCAGACAGGCTGCATAATATGCGTACACTCACACATATGCCTCAGCAC AAGCAGTATGCCATTGCCATGGAGACACTGCAGGTTTTTGCACCCCTAGCTAAACTTCTC GGGATGTATCGAATAAAGTCTGAGCTAGAATATCTGTCCTTCATGTACATGAATCCTGGT GATTTCGCTGAACTAAAGAAAAGAGTTGAGGACCTCTACAAGGCCCATGAACAAGAATTG GAAGAGGCAAATCAAATCTTAGGGGAAAAGATTGCTGAGGATCAATTTCTTGATCTTGTT AGTGTTGAAACACAAGTGCGTTCAGTCTGCAAAGAACTCTACAGCATTTATAAAACTGCG CTGAAGTCCAAGAGTTCAATAAATGAGATAAATCAGGTTGCACAGCTGCGGATCATCATA AAGCCAAAATCCTGCAATGGTGTGGGGCCATTGTGCACTGCACAACAGATCTGCTACCAT GTCCTTGGTCTTGTTCATGGTATCTGGACACCTATACCTCAAGCTGTGAAAGATTACATT GCAACCCCAAAGCCTAATGGATACCAAAGTCTACACACGACAGTGATACCATTTCTGAAT GAGAGTATGTTCCATTTGGAAGTTCAGATAAGAACAGAGGATATGGATCTCATAGCAGAA AGAGGCATTGCTGCGCACTACAGTGGAAGAGGGGTTGTTTCAGGGCCTGTTCGTCCTGGA ATATCAAGTGGAAGGAATTCAAATGGGAAAGTGATATGTCTGAACAATACAGGCTTTGCT CTGAGGATTGGTTGGCTCAATGCAATCCGTGAATGGCAAGAAGAGTTTGTTGGTAACATG AGTTCTAGGGAATTTGTTGATACTATCACCCGAGATCTTCTGGGAAGCCGTGTCTTTGTG TTTACACCAAAAGGCGAGATTAAAAACTTGCCTAAGGGGGCCACTGTGGTTGATTATGCT TACCTGATTCACACAGAAATTGGGAACAAAATGGTAGCTGCAAAGGTGAATGGCAATCTA GTTTCACCAATCCATGTACTTGCAAATGCTGAAGTTGTGGAGATTATAATTTATGATAAA TTATCTGCTAAATATGCATTCCAGCGTCACCAGCAGTGGCTTCAACATGCGAAAACTCGC AGTGCAAGACACAAAATTATGAAATTCTTGCGGGAGCAAGCTGCTCTTTCTGCTGCTGAA ATAACTGCCGACGCCGTTAATAACTTTGTTGCCGATCTTGAAGATGAAAGTGACTATGAG CAGTCGATTCCAAGCTCTGAAAATAAGGACTATACATTCAACTGGCAGAAGATATTGAAT TCTGACAAACTATCCTTTGGAAACAAGAAGAGCGACTGCTTTTTACCTGTTAAAAATGTC TCTGTGCCAAAGGTTAATGGGAAGCACAACAAAACTGTCAAAGAACTGGGCATCAAAATT AATGGTTCAACATTTCGTGGTGATAGCTTCACTGATTTTATTCACCCTGGTGTTTCCAGC AGTAAAGAAGTTCTCCCTAGTGTGGATAACTGGAAAGCTGGTAAAATTTGTGCGTGGCAC AATACAGAAGGCAGCTCTATCCAATGGCTCTGCATAGTGTGTGTTGATCGAAAAGGTATG GTTGCGGAAGTTTCATCAGCTCTAACAGCGTGTGGAATCACCATATGCTCGTGTGTGGCG GAGCGAGATAAGAGAAGGGGAATAGGTGTGATGTTGTTCCACTTTGAGGGGGCATATGAG AATGTGGTCAGTGCATGCTCCGGTGTTGATATGATTCTTGGGGTTCTTGGTTGGTCCGTT GGATGCAGCTGTAATCCTTTGGGTGTTCTTGAATGCTAG

Peptide Sequence

PEP ID	Os03t0340900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:12695305:12706384:1 gene:Os03g0340900 transcript:Os03t0340900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSH1 description:Similar to RSH1. (Os03t0340900-01)
Sequence	MQPPTGAVSGSSSSSLECVSSCRTSWRGGGRPYECSVLSCAWNAPRALTGALASTTAQCS SCSHAEAGAGWRRRGQSQRSNNSLLHITWAEGINRGKFGYGSSAHSFPTGNFFKSWSTSV DPTWRVFCYSSSESFNHISPETLWEDLKPAISYLQPEELNFVHDALKLAYEAHNGQKRRS GEPFIIHPVEVARILGEHELDWESIAAGLLHDTVEDTDMVTFERIENEFGVTVRRIVEGE TKVSKLGKLQCKNEGNSKQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQH KQYAIAMETLQVFAPLAKLLGMYRIKSELEYLSFMYMNPGDFAELKKRVEDLYKAHEQEL EEANQILGEKIAEDQFLDLVSVETQVRSVCKELYSIYKTALKSKSSINEINQVAQLRIII KPKSCNGVGPLCTAQQICYHVLGLVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLN ESMFHLEVQIRTEDMDLIAERGIAAHYSGRGVVSGPVRPGISSGRNSNGKVICLNNTGFA LRIGWLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYA YLIHTEIGNKMVAAKVNGNLVSPIHVLANAEVVEIIIYDKLSAKYAFQRHQQWLQHAKTR SARHKIMKFLREQAALSAAEITADAVNNFVADLEDESDYEQSIPSSENKDYTFNWQKILN SDKLSFGNKKSDCFLPVKNVSVPKVNGKHNKTVKELGIKINGSTFRGDSFTDFIHPGVSS SKEVLPSVDNWKAGKICAWHNTEGSSIQWLCIVCVDRKGMVAEVSSALTACGITICSCVA ERDKRRGIGVMLFHFEGAYENVVSACSGVDMILGVLGWSVGCSCNPLGVLEC

Transcript Sequence

Transcript ID	Os03t0340900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12695305:12706384:1 gene:Os03g0340900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSH1 description:Similar to RSH1. (Os03t0340900-01)
Sequence	GGCCTTCGTCTCGTGTTATCTCTTCTCTTCTTCCCACCCCCTCTCTCTCTCCTTCTCCTC CCTTCCGCCTTCATCATCGGCGGCAAACCCCTTCTTCCATCCACTTCCCCCACCGAATTC GCGCGCGCGCGCCCCGTGGCTGCGGCGGAGGGGAAGGTGAGGACGGCGGCGGGCACGGCC ACGGCCTCCGAGCCGCCGATGAGATTGCGCGCCACCGCGACATGCAACCCCCGACGGGCG CCGTGTCAGGGTCGTCGTCGTCGTCGCTGGAGTGCGTGAGCTCGTGCAGGACGTCGTGGA GGGGCGGAGGGAGGCCGTACGAATGCAGCGTGCTCTCGTGCGCCTGGAACGCGCCGCGGG CGCTCACGGGGGCGCTCGCCAGCACCACCGCGCAGTGCTCCTCCTGCAGCCACGCCGAGG CTGGGGCAGGGTGGAGGCGGCGGGGCCAGTCGCAGCGGAGTAACAATTCGTTACTGCACA TAACCTGGGCAGAAGGCATCAACAGGGGGAAGTTTGGTTATGGTTCATCAGCCCATTCTT TTCCCACTGGAAATTTTTTCAAATCTTGGTCAACTTCCGTGGATCCAACATGGAGAGTTT TCTGCTATTCATCATCTGAATCGTTCAATCATATTTCTCCAGAAACTTTGTGGGAGGATC TCAAGCCAGCTATCTCGTACCTTCAACCTGAAGAATTGAACTTTGTACACGATGCTCTGA AGTTGGCATATGAGGCACATAATGGGCAGAAACGCCGAAGTGGGGAACCTTTCATTATTC ATCCTGTTGAAGTTGCTCGTATCCTTGGGGAGCATGAACTTGACTGGGAATCAATAGCTG CTGGTTTATTGCATGACACTGTTGAAGATACAGACATGGTTACTTTTGAAAGAATAGAAA ATGAGTTTGGTGTAACCGTACGCCGTATTGTTGAAGGGGAGACAAAGGTATCTAAGCTAG GAAAACTTCAGTGCAAAAATGAGGGTAATTCAAAACAGGACGTCAAGGCTGAAGATTTAA GACAGATGTTTCTTGCCATGACAGAAGAGGTTCGTGTAATCATTGTGAAACTGGCAGACA GGCTGCATAATATGCGTACACTCACACATATGCCTCAGCACAAGCAGTATGCCATTGCCA TGGAGACACTGCAGGTTTTTGCACCCCTAGCTAAACTTCTCGGGATGTATCGAATAAAGT CTGAGCTAGAATATCTGTCCTTCATGTACATGAATCCTGGTGATTTCGCTGAACTAAAGA AAAGAGTTGAGGACCTCTACAAGGCCCATGAACAAGAATTGGAAGAGGCAAATCAAATCT TAGGGGAAAAGATTGCTGAGGATCAATTTCTTGATCTTGTTAGTGTTGAAACACAAGTGC GTTCAGTCTGCAAAGAACTCTACAGCATTTATAAAACTGCGCTGAAGTCCAAGAGTTCAA TAAATGAGATAAATCAGGTTGCACAGCTGCGGATCATCATAAAGCCAAAATCCTGCAATG GTGTGGGGCCATTGTGCACTGCACAACAGATCTGCTACCATGTCCTTGGTCTTGTTCATG GTATCTGGACACCTATACCTCAAGCTGTGAAAGATTACATTGCAACCCCAAAGCCTAATG GATACCAAAGTCTACACACGACAGTGATACCATTTCTGAATGAGAGTATGTTCCATTTGG AAGTTCAGATAAGAACAGAGGATATGGATCTCATAGCAGAAAGAGGCATTGCTGCGCACT ACAGTGGAAGAGGGGTTGTTTCAGGGCCTGTTCGTCCTGGAATATCAAGTGGAAGGAATT CAAATGGGAAAGTGATATGTCTGAACAATACAGGCTTTGCTCTGAGGATTGGTTGGCTCA ATGCAATCCGTGAATGGCAAGAAGAGTTTGTTGGTAACATGAGTTCTAGGGAATTTGTTG ATACTATCACCCGAGATCTTCTGGGAAGCCGTGTCTTTGTGTTTACACCAAAAGGCGAGA TTAAAAACTTGCCTAAGGGGGCCACTGTGGTTGATTATGCTTACCTGATTCACACAGAAA TTGGGAACAAAATGGTAGCTGCAAAGGTGAATGGCAATCTAGTTTCACCAATCCATGTAC TTGCAAATGCTGAAGTTGTGGAGATTATAATTTATGATAAATTATCTGCTAAATATGCAT TCCAGCGTCACCAGCAGTGGCTTCAACATGCGAAAACTCGCAGTGCAAGACACAAAATTA TGAAATTCTTGCGGGAGCAAGCTGCTCTTTCTGCTGCTGAAATAACTGCCGACGCCGTTA ATAACTTTGTTGCCGATCTTGAAGATGAAAGTGACTATGAGCAGTCGATTCCAAGCTCTG AAAATAAGGACTATACATTCAACTGGCAGAAGATATTGAATTCTGACAAACTATCCTTTG GAAACAAGAAGAGCGACTGCTTTTTACCTGTTAAAAATGTCTCTGTGCCAAAGGTTAATG GGAAGCACAACAAAACTGTCAAAGAACTGGGCATCAAAATTAATGGTTCAACATTTCGTG GTGATAGCTTCACTGATTTTATTCACCCTGGTGTTTCCAGCAGTAAAGAAGTTCTCCCTA GTGTGGATAACTGGAAAGCTGGTAAAATTTGTGCGTGGCACAATACAGAAGGCAGCTCTA TCCAATGGCTCTGCATAGTGTGTGTTGATCGAAAAGGTATGGTTGCGGAAGTTTCATCAG CTCTAACAGCGTGTGGAATCACCATATGCTCGTGTGTGGCGGAGCGAGATAAGAGAAGGG GAATAGGTGTGATGTTGTTCCACTTTGAGGGGGCATATGAGAATGTGGTCAGTGCATGCT CCGGTGTTGATATGATTCTTGGGGTTCTTGGTTGGTCCGTTGGATGCAGCTGTAATCCTT TGGGTGTTCTTGAATGCTAGCGGACAACAGGCATCACGCTGCATCAGTTCACCATCTCCA GCAAAAAGGAGAGACAATTTTGAAGCACCAAGAAATCAGTCCGCTCAATGGTTCAGGAGC AGTCCGATCTTGGTTGATGATGCTGTGCAACCCATAACTTGTCCTTCAAAGAAGGTAGAG TGAGGGTAGAGCAAGCTGGAGCCGGATATTCTGGTTCGTTTGGAAGCGAGAGGAGTGTAC ATAGCTGAGCAAGCTACTAGTGAACTGTTAGTCCAGGGATTGGTTGGGTTATAGTATTAT ACAAAAGCCTCCATGAATGACCAACAATGGCAGCTTCTCTCTTCTATTTTTTTTGTTTGC CATTCGTACACTAGTTATGTATGACATGTGCAGCTAGAATTTTGATCTGATGGGATTCCA ATGCCCCAAATTTTGCCCGT