Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0340500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:12674467:12680655:-1 gene:Os03g0340500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCROSE SYNTHASE 4 description:Similar to Sucrose synthase (EC 2.4.1.13). (Os03t0340500-01);Similar to sucrose synthase2. (Os03t0340500-03)
Sequence	ATGTCGGGCCCCAAGCTCGACCGCACCCCGAGCATCCGCGACCGCGTCGAGGACACCCTC CACGCCCACCGCAACGAGCTCGTCGCCCTCCTCTCCAAGTACGTGAGCCAGGGGAAGGGG ATCCTGCAGCCGCACCACATCCTCGACGCGCTCGACGAGGTCCAGAGCTCCGGCGGCCGC GCCCTCGTCGAGGGCCCCTTCCTCGACGTCCTCCGCTCCGCCCAGGAGGCGATCGTGCTG CCGCCGTTCGTGGCGATCGCGGTGCGGCCGCGGCCAGGGGTGTGGGAGTACGTCCGCGTG AACGTGCACGAGCTCAGCGTCGAGCAGCTCACCGTGTCGGAGTACCTCCGCTTCAAGGAG GAGCTCGTCGACGGCCAGTACAACGATCCGTACATACTTGAGCTTGATTTTGAGCCATTC AATGCCTCGGTTCCACGCCCAAATCGGTCATCATCAATTGGAAATGGCGTGCAGTTTCTC AACAGGCACTTGTCTTCGATCATGTTCCGGAACAAGGATTGCCTGGAGCCCCTACTTGAT TTCCTTCGTGGGCATCGGCATAAGGGTCATGTCATGATGCTAAATGACAGGATACAGAGT CTGGGAAGACTTCAGTCTGTGCTGACAAAAGCTGAGGAGCACTTGTCGAAACTCCCAGCT GACACACCATACTCACAGTTCGCATATAAGTTTCAAGAATGGGGATTGGAGAAGGGTTGG GGCGACACAGCTGGATATGTCTTGGAGATGATACATCTCCTTCTGGATGTGCTTCAAGCG CCTGATCCATCTACTCTTGAGACGTTCTTGGGAAGGATCCCCATGATCTTTAATGTCGTC GTAGTGTCTCCTCATGGATATTTTGGCCAAGCCAATGTGTTGGGCTTACCAGATACTGGA GGGCAGATTGTCTATATACTGGACCAAGTCCGTGCATTGGAGAATGAGATGGTTCTTAGG TTAAAGAAACAAGGCCTTGATTTTACCCCTAAAATTCTTATTGTTACTCGGCTGATACCA GAAGCAAAAGGGACATCATGCAATCAGCGTCTTGAGAGAATAAGTGGGACACAACATACT TACATATTACGAGTGCCATTCAGAAATGAAAATGGGATACTCAGGAAATGGATATCAAGA TTTGATGTATGGCCCTACCTGGAGAAATTTGCAGAGGATGCTGCTGGTGAGATTGCTGCA GAACTACAAGGTACTCCAGACTTCATAATTGGAAACTACAGTGACGGTAATCTTGTTGCA TCATTGCTATCTTACAAGATGGGAATTACCCAGTGCAATATTGCTCATGCTTTGGAAAAG ACTAAATATCCAGACTCAGACATATACTGGACGAAGTACGATGAGAAGTACCATTTCTCC TGTCAGTTCACAGCTGATATAATCGCCATGAACAATGCTGATTTTATAATCACCAGCACA TACCAGGAAATTGCTGGCAGCAAAAACACAGTTGGACAGTATGAGAGCCATACTGCATTT ACTCTTCCTGGTCTGTATCGTATTGTCCATGGGATTGATGTTTTTGACCCAAAGTTCAAC ATAGTCTCTCCAGGAGCAGACATGTCTATATACTTTCCGTACACTGAAAAGGCCAAGCGG CTCACTTCGCTTCATGGTTCACTTGAAAACTTGATTTCTGACCCAGAGCAAAATGACGAA CATATTGGACACCTGGATGACAGATCAAAACCCATTCTCTTTTCCATGGCAAGACTTGAC CGAGTTAAGAACATAACAGGGTTGGTTGAAGCTTATGCTAAAAACGCTAGGCTGAGGGAG CTGGTAAACCTTGTCGTGGTTGCTGGCTATAACGATGTCAAGAAATCCAAGGACAGAGAA GAAATCGCAGAGATTGAGAAGATGCATGAACTTATTAAGACCTATAACTTGTTTGGGCAG TTCCGTTGGATCTCGGCTCAGACGAACAGGGCTCGCAATGGTGAGCTCTATCGCTACATA GCTGATACTCATGGTGCCTTCGTGCAGCCAGCTTTCTACGAAGCATTCGGTCTCACTGTT GTGGAGGCCATGACATGTGGACTCCCTACTTTTGCAACAGTCCATGGTGGACCTGCCGAG ATTATAGAGCACGGGATCTCAGGGTTCCACATAGATCCTTATCATCCGGATCAAGCTGCA AATCTGATAGCTGACTTCTTCGAACAATGTAAACAAGACCCCAACCATTGGGTTGAAGTT TCTAATAGAGGCCTACAACGTATATATGAGAAATATACATGGAAGATCTACTCTGAGAGG TTGATGACATTGGCTGGGGTTTATGGCTTCTGGAAGTATGTCTCGAAGCTTGAGAGGCGG GAGACCAGGCGCTATCTTGAGATGTTCTACATATTGAAGTTCCGTGAACTGGCGAAGACT GTACCTCTTGCAGTAGATGAGGCACACTGA

Peptide Sequence

PEP ID	Os03t0340500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:12674467:12680655:-1 gene:Os03g0340500 transcript:Os03t0340500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCROSE SYNTHASE 4 description:Similar to Sucrose synthase (EC 2.4.1.13). (Os03t0340500-01);Similar to sucrose synthase2. (Os03t0340500-03)
Sequence	MSGPKLDRTPSIRDRVEDTLHAHRNELVALLSKYVSQGKGILQPHHILDALDEVQSSGGR ALVEGPFLDVLRSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVHELSVEQLTVSEYLRFKE ELVDGQYNDPYILELDFEPFNASVPRPNRSSSIGNGVQFLNRHLSSIMFRNKDCLEPLLD FLRGHRHKGHVMMLNDRIQSLGRLQSVLTKAEEHLSKLPADTPYSQFAYKFQEWGLEKGW GDTAGYVLEMIHLLLDVLQAPDPSTLETFLGRIPMIFNVVVVSPHGYFGQANVLGLPDTG GQIVYILDQVRALENEMVLRLKKQGLDFTPKILIVTRLIPEAKGTSCNQRLERISGTQHT YILRVPFRNENGILRKWISRFDVWPYLEKFAEDAAGEIAAELQGTPDFIIGNYSDGNLVA SLLSYKMGITQCNIAHALEKTKYPDSDIYWTKYDEKYHFSCQFTADIIAMNNADFIITST YQEIAGSKNTVGQYESHTAFTLPGLYRIVHGIDVFDPKFNIVSPGADMSIYFPYTEKAKR LTSLHGSLENLISDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGLVEAYAKNARLRE LVNLVVVAGYNDVKKSKDREEIAEIEKMHELIKTYNLFGQFRWISAQTNRARNGELYRYI ADTHGAFVQPAFYEAFGLTVVEAMTCGLPTFATVHGGPAEIIEHGISGFHIDPYHPDQAA NLIADFFEQCKQDPNHWVEVSNRGLQRIYEKYTWKIYSERLMTLAGVYGFWKYVSKLERR ETRRYLEMFYILKFRELAKTVPLAVDEAH

Transcript Sequence

Transcript ID	Os03t0340500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12674467:12680655:-1 gene:Os03g0340500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCROSE SYNTHASE 4 description:Similar to Sucrose synthase (EC 2.4.1.13). (Os03t0340500-01);Similar to sucrose synthase2. (Os03t0340500-03)
Sequence	AGTCTCGCCCACCGCCACCGCCACTGCACTCCGGTCGCCGGAGCAGCCGCCATGTCGGGC CCCAAGCTCGACCGCACCCCGAGCATCCGCGACCGCGTCGAGGACACCCTCCACGCCCAC CGCAACGAGCTCGTCGCCCTCCTCTCCAAGTACGTGAGCCAGGGGAAGGGGATCCTGCAG CCGCACCACATCCTCGACGCGCTCGACGAGGTCCAGAGCTCCGGCGGCCGCGCCCTCGTC GAGGGCCCCTTCCTCGACGTCCTCCGCTCCGCCCAGGAGGCGATCGTGCTGCCGCCGTTC GTGGCGATCGCGGTGCGGCCGCGGCCAGGGGTGTGGGAGTACGTCCGCGTGAACGTGCAC GAGCTCAGCGTCGAGCAGCTCACCGTGTCGGAGTACCTCCGCTTCAAGGAGGAGCTCGTC GACGGCCAGTACAACGATCCGTACATACTTGAGCTTGATTTTGAGCCATTCAATGCCTCG GTTCCACGCCCAAATCGGTCATCATCAATTGGAAATGGCGTGCAGTTTCTCAACAGGCAC TTGTCTTCGATCATGTTCCGGAACAAGGATTGCCTGGAGCCCCTACTTGATTTCCTTCGT GGGCATCGGCATAAGGGTCATGTCATGATGCTAAATGACAGGATACAGAGTCTGGGAAGA CTTCAGTCTGTGCTGACAAAAGCTGAGGAGCACTTGTCGAAACTCCCAGCTGACACACCA TACTCACAGTTCGCATATAAGTTTCAAGAATGGGGATTGGAGAAGGGTTGGGGCGACACA GCTGGATATGTCTTGGAGATGATACATCTCCTTCTGGATGTGCTTCAAGCGCCTGATCCA TCTACTCTTGAGACGTTCTTGGGAAGGATCCCCATGATCTTTAATGTCGTCGTAGTGTCT CCTCATGGATATTTTGGCCAAGCCAATGTGTTGGGCTTACCAGATACTGGAGGGCAGATT GTCTATATACTGGACCAAGTCCGTGCATTGGAGAATGAGATGGTTCTTAGGTTAAAGAAA CAAGGCCTTGATTTTACCCCTAAAATTCTTATTGTTACTCGGCTGATACCAGAAGCAAAA GGGACATCATGCAATCAGCGTCTTGAGAGAATAAGTGGGACACAACATACTTACATATTA CGAGTGCCATTCAGAAATGAAAATGGGATACTCAGGAAATGGATATCAAGATTTGATGTA TGGCCCTACCTGGAGAAATTTGCAGAGGATGCTGCTGGTGAGATTGCTGCAGAACTACAA GGTACTCCAGACTTCATAATTGGAAACTACAGTGACGGTAATCTTGTTGCATCATTGCTA TCTTACAAGATGGGAATTACCCAGTGCAATATTGCTCATGCTTTGGAAAAGACTAAATAT CCAGACTCAGACATATACTGGACGAAGTACGATGAGAAGTACCATTTCTCCTGTCAGTTC ACAGCTGATATAATCGCCATGAACAATGCTGATTTTATAATCACCAGCACATACCAGGAA ATTGCTGGCAGCAAAAACACAGTTGGACAGTATGAGAGCCATACTGCATTTACTCTTCCT GGTCTGTATCGTATTGTCCATGGGATTGATGTTTTTGACCCAAAGTTCAACATAGTCTCT CCAGGAGCAGACATGTCTATATACTTTCCGTACACTGAAAAGGCCAAGCGGCTCACTTCG CTTCATGGTTCACTTGAAAACTTGATTTCTGACCCAGAGCAAAATGACGAACATATTGGA CACCTGGATGACAGATCAAAACCCATTCTCTTTTCCATGGCAAGACTTGACCGAGTTAAG AACATAACAGGGTTGGTTGAAGCTTATGCTAAAAACGCTAGGCTGAGGGAGCTGGTAAAC CTTGTCGTGGTTGCTGGCTATAACGATGTCAAGAAATCCAAGGACAGAGAAGAAATCGCA GAGATTGAGAAGATGCATGAACTTATTAAGACCTATAACTTGTTTGGGCAGTTCCGTTGG ATCTCGGCTCAGACGAACAGGGCTCGCAATGGTGAGCTCTATCGCTACATAGCTGATACT CATGGTGCCTTCGTGCAGCCAGCTTTCTACGAAGCATTCGGTCTCACTGTTGTGGAGGCC ATGACATGTGGACTCCCTACTTTTGCAACAGTCCATGGTGGACCTGCCGAGATTATAGAG CACGGGATCTCAGGGTTCCACATAGATCCTTATCATCCGGATCAAGCTGCAAATCTGATA GCTGACTTCTTCGAACAATGTAAACAAGACCCCAACCATTGGGTTGAAGTTTCTAATAGA GGCCTACAACGTATATATGAGAAATATACATGGAAGATCTACTCTGAGAGGTTGATGACA TTGGCTGGGGTTTATGGCTTCTGGAAGTATGTCTCGAAGCTTGAGAGGCGGGAGACCAGG CGCTATCTTGAGATGTTCTACATATTGAAGTTCCGTGAACTGGCGAAGACTGTACCTCTT GCAGTAGATGAGGCACACTGACTGTAGGTCCTCGACGTGATGAGATCTGAGGGAAATCTT CCTGCTGTCAGTGGGAATGGTATAGGCAATAATGTGCAGCAGATGGCCGCTTGGCCGATA ATAAAATGGAATGTAACTTGTGTGTTCAGCAAGTGACGAACTTGGGAGTTGGGACTCTGT AAAACTAGATTTGTCAAACATCTTGTCTATGTACATTAAAATAGTTTGATACTCAGTGCT TCATTGCCATTGTGTTAATTTGATAATCTGTTACCTTGTACTATTAAGCTAACTGTTTTC CC