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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0340100-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:12652784:12653580:1 gene:Os03g0340100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein. (Os03t0340100-00)
Sequence

ATGGCCAGGCGATGCCTCGTCACGTCGTCGGACACCGCGGCGCCGCCGCCACCTGCGGCG
GCCGGCGCCGCGGCTACTCAGGCGCCGCATTTGCCGCGGCGGGGCCTGCACGGGCCGGCC
GCCATGAAGGTGGCCATCGCCGGCAACGTCGTGGTGGCGGTGCTCTTCGTCGCCGTCATC
GTCTGGCGGCTCTTCTTCTTCGGGGGTAGAGATCGAGCCGGCGGCGCGGCGGCCTCCGCC
GCCGCCGATGCGGACGGAGAGTCGTCCTCCGCCGGGAGCTCGCCGTGCGCGTCGCCTCGG
GCGGGCGGCGGCCTGGGGAGAGAGGACCTCATGGCGCTGCCGGTGTACGTGCACGGCGCG
TCGGCGGCGGCGGACGGCGGCGCCAAGGCGGAGGAGTGCGCGGTGTGCATAGGCGAGCTC
AGGGACGGCGACACCGGCCGTCTCCTGCCCAGGTGCGGGCACCGCTTCCACGCCGAGTGC
GTCGACAAGTGGTTCCGGTCGCACGCCACATGCCCGCTCTGCCGCGCCGCCGTCGCCGCC
GCGGACGGCGACTCCGGCGGCGAGGGCGACACCAAGGTAGCGGTTGTGCAGCAAGACGTG
TAG

Peptide Sequence

PEP ID

Os03t0340100-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:12652784:12653580:1 gene:Os03g0340100 transcript:Os03t0340100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein. (Os03t0340100-00)
Sequence

MARRCLVTSSDTAAPPPPAAAGAAATQAPHLPRRGLHGPAAMKVAIAGNVVVAVLFVAVI
VWRLFFFGGRDRAGGAAASAAADADGESSSAGSSPCASPRAGGGLGREDLMALPVYVHGA
SAAADGGAKAEECAVCIGELRDGDTGRLLPRCGHRFHAECVDKWFRSHATCPLCRAAVAA
ADGDSGGEGDTKVAVVQQDV

Transcript Sequence

Transcript ID

Os03t0340100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12652784:12653580:1 gene:Os03g0340100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein. (Os03t0340100-00)
Sequence

AAAAGTTGTGCATCCAACGCGTTCATCGCCGGAAGTGACAAGGTACAATAGCGCAGCATC
GATCAATGGCCAGGCGATGCCTCGTCACGTCGTCGGACACCGCGGCGCCGCCGCCACCTG
CGGCGGCCGGCGCCGCGGCTACTCAGGCGCCGCATTTGCCGCGGCGGGGCCTGCACGGGC
CGGCCGCCATGAAGGTGGCCATCGCCGGCAACGTCGTGGTGGCGGTGCTCTTCGTCGCCG
TCATCGTCTGGCGGCTCTTCTTCTTCGGGGGTAGAGATCGAGCCGGCGGCGCGGCGGCCT
CCGCCGCCGCCGATGCGGACGGAGAGTCGTCCTCCGCCGGGAGCTCGCCGTGCGCGTCGC
CTCGGGCGGGCGGCGGCCTGGGGAGAGAGGACCTCATGGCGCTGCCGGTGTACGTGCACG
GCGCGTCGGCGGCGGCGGACGGCGGCGCCAAGGCGGAGGAGTGCGCGGTGTGCATAGGCG
AGCTCAGGGACGGCGACACCGGCCGTCTCCTGCCCAGGTGCGGGCACCGCTTCCACGCCG
AGTGCGTCGACAAGTGGTTCCGGTCGCACGCCACATGCCCGCTCTGCCGCGCCGCCGTCG
CCGCCGCGGACGGCGACTCCGGCGGCGAGGGCGACACCAAGGTAGCGGTTGTGCAGCAAG
ACGTGTAGTAATTAATAATTAGTGAAGAATGTGAGATGAACACATGTACATGATGCACTA
GCCAATAGTGTTCAAGAACTGCATGCATGCATATGCTTGTTGGAAATGCTACTCAATTCA
TCTTTCGATGTGATGGG