Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0339100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:12599500:12605800:1 gene:Os03g0339100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-70 description:Similar to PRL1 protein. (Os03t0339100-01)
Sequence

ATGGCGACGGCGGAGCCGGTGGAGCCGCAGTCGCTGAAGAAGCTGAGCCTCAAGTCGCTC
AAGCGCTCGCACGACCTCTTCGCGCCCACCCACTCCCTCCTCTTCACTCCCGATCCGGAG
AGTAAGCAGGTTCGTGTCGGCTGCAAGGTGAATGCAGAGTACAGCGCGGTGAAGAACCTA
CCAACAGATCAGGGCCGAGGACAGGTCAAGAGTGCTGCGGCACCTTCAACTGCATTGGCG
CTTCCAGGAACACAAGATGTCAAAGATGCTGATAACAAAGGCAGCAGTACTGCTATTGTT
CCTGCACCACATATGCTCCCCAAAGCACCGGATTCAACGATACCAGGCAAGAATACAACT
ATAACAATTCCTGGTTCATCTGACAGATTCTCTACATCTGCACTGATGGAAAGGATACCA
AGTAGATGGCCACGGCCTGTCTGGCATGCTCCTTGGAAGAATTATAGGGTGATCAGTGGT
CACTTGGGATGGGTGCGGTCAATTGCATTTGATCCAAGTAACGAATGGTTCTGTACGGGT
TCTGCCGACAGGACGATTAAGATCTGGGACCTTGCATCAGGAACATTGAAGCTTACATTG
ACTGGCCATATTGAACAAATTCGTGGGCTTGCTGTGAGCCAACGGCACACATATTTATTT
TCTGCTGGTGATGACAAACAAGTAAAGTGTTGGGATCTTGAACAAAACAAGGTTATTAGG
TCTTATCATGGCCATTTGAGTGGGGTGTACTGCCTTGCTCTACATCCAACAATCGATATC
TTGCTGACTGGTGGTCGCGATTCAGTTTGTAGGGTCTGGGACATCCGAACGAAAGCTCAT
GTTTCTGCTTTAACTGGTCATGATAACACCGTATGCTCAGTGTTTGCTCGTCCTACGGAT
CCACAAGTTGTCACGGGCTCACATGATTCAACTATCAAGTTCTGGGACCTTGTAGCTGGA
AGGACTATGTGTACTCTTACACATCATAAGAAATCAGTTCGGGCTATGGCGCTGCATCCA
AAAGAGAAATCGTTTGCATCTGCATCAGCAGACAATATAAAGAAGTTTAGCCTGCCCAAA
GGCGAATTTCTACACAATATGCTGTCCCAGCAGAAAACCATCATAAACTCAATGGCTGTA
AATGAAGATGGTGTCTTGGCAACTGGAGGGGATAATGGGAGTCTCTGGTTTTGGGATTGG
AAGAGTGGCCATAACTTTCAACAAGATCAGACTATAGTACAACCTGGATCATTGGAGAGT
GAGGCATGCATATATGCCCTTTCATACGATGTTAGTGGATCACGGCTGGTGACATGTGAA
GCTGACAAGACAATAAAAATGTGGAAGGAAGATTTGTCAGCCACTCCAGAGACCCATCCT
ATCAATTTCAAGCCTCCAAAGGACATCAGAAGATACTGA

Peptide Sequence

PEP ID

Os03t0339100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:12599500:12605800:1 gene:Os03g0339100 transcript:Os03t0339100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-70 description:Similar to PRL1 protein. (Os03t0339100-01)
Sequence

MATAEPVEPQSLKKLSLKSLKRSHDLFAPTHSLLFTPDPESKQVRVGCKVNAEYSAVKNL
PTDQGRGQVKSAAAPSTALALPGTQDVKDADNKGSSTAIVPAPHMLPKAPDSTIPGKNTT
ITIPGSSDRFSTSALMERIPSRWPRPVWHAPWKNYRVISGHLGWVRSIAFDPSNEWFCTG
SADRTIKIWDLASGTLKLTLTGHIEQIRGLAVSQRHTYLFSAGDDKQVKCWDLEQNKVIR
SYHGHLSGVYCLALHPTIDILLTGGRDSVCRVWDIRTKAHVSALTGHDNTVCSVFARPTD
PQVVTGSHDSTIKFWDLVAGRTMCTLTHHKKSVRAMALHPKEKSFASASADNIKKFSLPK
GEFLHNMLSQQKTIINSMAVNEDGVLATGGDNGSLWFWDWKSGHNFQQDQTIVQPGSLES
EACIYALSYDVSGSRLVTCEADKTIKMWKEDLSATPETHPINFKPPKDIRRY

Transcript Sequence

Transcript ID

Os03t0339100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12599500:12605800:1 gene:Os03g0339100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-70 description:Similar to PRL1 protein. (Os03t0339100-01)
Sequence

GGCTGCTTCCCCCTCTCTCTTCCGCCTCGGCGAGCAGCGACACCACCGGAGCAGGGCGGC
CGGCGGCGACGGGCGGGGCCCGACGGGGAGGAGGTAGGCGGGCTTGGATCTGCAGGGCTC
ACGCGGCGTAAGAGCAGGGGAAGCCGTATCTCCGGCGGCGTTCATCGCAGCAGGAAGTCG
TCATGGCGACGGCGGAGCCGGTGGAGCCGCAGTCGCTGAAGAAGCTGAGCCTCAAGTCGC
TCAAGCGCTCGCACGACCTCTTCGCGCCCACCCACTCCCTCCTCTTCACTCCCGATCCGG
AGAGTAAGCAGGTTCGTGTCGGCTGCAAGGTGAATGCAGAGTACAGCGCGGTGAAGAACC
TACCAACAGATCAGGGCCGAGGACAGGTCAAGAGTGCTGCGGCACCTTCAACTGCATTGG
CGCTTCCAGGAACACAAGATGTCAAAGATGCTGATAACAAAGGCAGCAGTACTGCTATTG
TTCCTGCACCACATATGCTCCCCAAAGCACCGGATTCAACGATACCAGGCAAGAATACAA
CTATAACAATTCCTGGTTCATCTGACAGATTCTCTACATCTGCACTGATGGAAAGGATAC
CAAGTAGATGGCCACGGCCTGTCTGGCATGCTCCTTGGAAGAATTATAGGGTGATCAGTG
GTCACTTGGGATGGGTGCGGTCAATTGCATTTGATCCAAGTAACGAATGGTTCTGTACGG
GTTCTGCCGACAGGACGATTAAGATCTGGGACCTTGCATCAGGAACATTGAAGCTTACAT
TGACTGGCCATATTGAACAAATTCGTGGGCTTGCTGTGAGCCAACGGCACACATATTTAT
TTTCTGCTGGTGATGACAAACAAGTAAAGTGTTGGGATCTTGAACAAAACAAGGTTATTA
GGTCTTATCATGGCCATTTGAGTGGGGTGTACTGCCTTGCTCTACATCCAACAATCGATA
TCTTGCTGACTGGTGGTCGCGATTCAGTTTGTAGGGTCTGGGACATCCGAACGAAAGCTC
ATGTTTCTGCTTTAACTGGTCATGATAACACCGTATGCTCAGTGTTTGCTCGTCCTACGG
ATCCACAAGTTGTCACGGGCTCACATGATTCAACTATCAAGTTCTGGGACCTTGTAGCTG
GAAGGACTATGTGTACTCTTACACATCATAAGAAATCAGTTCGGGCTATGGCGCTGCATC
CAAAAGAGAAATCGTTTGCATCTGCATCAGCAGACAATATAAAGAAGTTTAGCCTGCCCA
AAGGCGAATTTCTACACAATATGCTGTCCCAGCAGAAAACCATCATAAACTCAATGGCTG
TAAATGAAGATGGTGTCTTGGCAACTGGAGGGGATAATGGGAGTCTCTGGTTTTGGGATT
GGAAGAGTGGCCATAACTTTCAACAAGATCAGACTATAGTACAACCTGGATCATTGGAGA
GTGAGGCATGCATATATGCCCTTTCATACGATGTTAGTGGATCACGGCTGGTGACATGTG
AAGCTGACAAGACAATAAAAATGTGGAAGGAAGATTTGTCAGCCACTCCAGAGACCCATC
CTATCAATTTCAAGCCTCCAAAGGACATCAGAAGATACTGATCAGACACCTGGTGCATCT
AATTTCAGACAGGGTACTTTTAACTCCCTAAATACCTATGTTGTTGTAGTGTTTATGCTA
AATTCAAATTGGTTGAATCACACTAGGGATTCCATGCATCGCCATGGAATGGACCTGTCT
GAATTTTGCCGTGCTTCGCAAATCCTCCTTATCTACCGAACAGAATATTGACTGTAAGAA
GTTTTCATATATTAGAAGAGTTTCCTCTTGGCGAACATATCTGGGTTTGCCCATAGTTGT
GGCACAGCATTGCATTTTTCTTTCTATTCTTTTCTTTTCATTTTTTTTTGGAGAGGGCAT
TGCATTCACATAGCTTCCGGATAATATAATCCTATCGTTGGATGTAAAGCCCCTATAGGG
CTTTAATCAGCACGTGACTTGCACGTGCGTTGACATGTGGAGCGGCGACACCAGAACTCC
TGCCGGTCATGTATTGTATGTTTCAGTAAAGTTACTCTTCAAATTTTAGTGCGGCATCCT
GTAAAGTTACTCTTAAAATTTATGCTCAATACTCCTATATGGTGTTTCTATACCTGGGAG
CAAAATTGTCATGCC