Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0338600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:12591671:12595636:-1 gene:Os03g0338600 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase family protein. (Os03t0338600-01)
Sequence	ATGGCCGCCGCCGCCGCGGCGACGTGGCGCCTCTGGAGGCCCTACTCCTCCGCTCTCCTC TCTCGCCGGGTGAACCCGAGGTTCCTCCGTACTACGCCGTGCGTCTCCTACCCCGGCGGC GCCGCGGCTTCTGCGGCGCCACCCTCGCCTCCGCTTGCCACCACCTGCTCCGACGATTGG GGCGGCGGGATGAGGTGGGAGTCCGCGCGGAAGAAGAGGGTCGTGCTCCGCGTAGGCTAC GTCGGCACGGAGTACCGAGGTCTTCAGAAGCAGCGGGAGCTCAGCGCGGACTCGACAATT GAGTCAGTCTTGGAAACAGCCATCTTCAAGGCTGGGGGCATTCTTGAGAGTAATTATGGG AAGCTGCAAAAAGTTGGCTGGGAAAGGAGTAGTAGAACTGATAAAGGGGTACATTCACTG GCCACAATGATCTCTCTGAAAATGGAAATCCCTGATCGAGCATGGGAGAATGATCCTGAT GGCATTGCTCTTTCAAACTTCATTAACTCAAATTTGCCAGACAATGTTAGAGTTTTCAGT GTTTTGCCTGCTCAAAGGAGTTTCGATGTGAGGAGGGAATGCTTGTATCGGGAATACTTG TATCTTCTTCCTGCTGAAATAATTGGAATTAAAGGTGGTTGTAGCTCTGAAGAAGTAATG GAACACCTGTCAGAATTCAATAGCATTCTGAAAGGTTTTGAGGGAAACCATCCATTTCAT AATTACACTGCTCGTGCCAAGTATAGGAAAGTTCTAGCAGGAAGGCATCGTAAGGTAAAA GGGGCAAGCTCAGCTGTAAATTCCATGCCCACTGAAATGAGTTTGGACCAAAGCTCCTCT GATGACGGAACTACTTCAGACCATGATGAAGAAGACTTGAACTCTTCGTCGATAATTGGT TCTAGTGTACCAGAAGACAGTTATAAGGATAATCCCGAATTTTCTGAGAAGCAGGTTCAG ATTCGAGCTAGGTGGCTTCATGAGCCTGATGAAAATGATCGACTGAATGCTTCACATTTC AGAGATATCCTCACATTCTCCTGTGGAGAGCTCCAGATTTCATCAGGAATTCAATTTGTG GAATTGACTATATCAGGAGTATCTTTCATGCTGCATCAGATCCGGAAGATGGTTGGTACT TCGGTGGCGGTTAAGCGTGGATTACTACCCAAAGATATTATAGCACTGTCTCTTGCAAAG TTTTCTCGCATTGTGTTACCAATTGCCCCTTCTGAAGTTTTGGTGCTTAGAGATAACAGT TTCTGCCTGAGGAACAAGCAAGGGACTATAGTTCGCCCTGGGATCCAATCAATGAATGAA TCTGAAGAAGTCAAGAAGGGGGTAATGGAATTCTACAGGGCAGCTCTTGTTCCAGAGCTA GCAAACTTCCTGGATGCATCCATGCCTCCATGGAAAGAATGGGTGGAGAACTTGGACCGA TTCACGAGCATACCAGATCCACAGCTGGAGGAAGTTAGGAGCGCTTATAGGGTGTGGAAA GCGGACTACGACCGAGTAAAAATGGCCAGAAAGAGTGCCAGCAGCGACTAA

Peptide Sequence

PEP ID	Os03t0338600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:12591671:12595636:-1 gene:Os03g0338600 transcript:Os03t0338600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase family protein. (Os03t0338600-01)
Sequence	MAAAAAATWRLWRPYSSALLSRRVNPRFLRTTPCVSYPGGAAASAAPPSPPLATTCSDDW GGGMRWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYG KLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFS VLPAQRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFH NYTARAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSSDDGTTSDHDEEDLNSSSIIG SSVPEDSYKDNPEFSEKQVQIRARWLHEPDENDRLNASHFRDILTFSCGELQISSGIQFV ELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLVLRDNS FCLRNKQGTIVRPGIQSMNESEEVKKGVMEFYRAALVPELANFLDASMPPWKEWVENLDR FTSIPDPQLEEVRSAYRVWKADYDRVKMARKSASSD

Transcript Sequence

Transcript ID	Os03t0338600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12591671:12595636:-1 gene:Os03g0338600 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase family protein. (Os03t0338600-01)
Sequence	ATCGTCTCTCTTCCATTCTGCTTGAACTACCGCCCGCGCCGCCGATGGCCGCCGCCGCCG CGGCGACGTGGCGCCTCTGGAGGCCCTACTCCTCCGCTCTCCTCTCTCGCCGGGTGAACC CGAGGTTCCTCCGTACTACGCCGTGCGTCTCCTACCCCGGCGGCGCCGCGGCTTCTGCGG CGCCACCCTCGCCTCCGCTTGCCACCACCTGCTCCGACGATTGGGGCGGCGGGATGAGGT GGGAGTCCGCGCGGAAGAAGAGGGTCGTGCTCCGCGTAGGCTACGTCGGCACGGAGTACC GAGGTCTTCAGAAGCAGCGGGAGCTCAGCGCGGACTCGACAATTGAGTCAGTCTTGGAAA CAGCCATCTTCAAGGCTGGGGGCATTCTTGAGAGTAATTATGGGAAGCTGCAAAAAGTTG GCTGGGAAAGGAGTAGTAGAACTGATAAAGGGGTACATTCACTGGCCACAATGATCTCTC TGAAAATGGAAATCCCTGATCGAGCATGGGAGAATGATCCTGATGGCATTGCTCTTTCAA ACTTCATTAACTCAAATTTGCCAGACAATGTTAGAGTTTTCAGTGTTTTGCCTGCTCAAA GGAGTTTCGATGTGAGGAGGGAATGCTTGTATCGGGAATACTTGTATCTTCTTCCTGCTG AAATAATTGGAATTAAAGGTGGTTGTAGCTCTGAAGAAGTAATGGAACACCTGTCAGAAT TCAATAGCATTCTGAAAGGTTTTGAGGGAAACCATCCATTTCATAATTACACTGCTCGTG CCAAGTATAGGAAAGTTCTAGCAGGAAGGCATCGTAAGGTAAAAGGGGCAAGCTCAGCTG TAAATTCCATGCCCACTGAAATGAGTTTGGACCAAAGCTCCTCTGATGACGGAACTACTT CAGACCATGATGAAGAAGACTTGAACTCTTCGTCGATAATTGGTTCTAGTGTACCAGAAG ACAGTTATAAGGATAATCCCGAATTTTCTGAGAAGCAGGTTCAGATTCGAGCTAGGTGGC TTCATGAGCCTGATGAAAATGATCGACTGAATGCTTCACATTTCAGAGATATCCTCACAT TCTCCTGTGGAGAGCTCCAGATTTCATCAGGAATTCAATTTGTGGAATTGACTATATCAG GAGTATCTTTCATGCTGCATCAGATCCGGAAGATGGTTGGTACTTCGGTGGCGGTTAAGC GTGGATTACTACCCAAAGATATTATAGCACTGTCTCTTGCAAAGTTTTCTCGCATTGTGT TACCAATTGCCCCTTCTGAAGTTTTGGTGCTTAGAGATAACAGTTTCTGCCTGAGGAACA AGCAAGGGACTATAGTTCGCCCTGGGATCCAATCAATGAATGAATCTGAAGAAGTCAAGA AGGGGGTAATGGAATTCTACAGGGCAGCTCTTGTTCCAGAGCTAGCAAACTTCCTGGATG CATCCATGCCTCCATGGAAAGAATGGGTGGAGAACTTGGACCGATTCACGAGCATACCAG ATCCACAGCTGGAGGAAGTTAGGAGCGCTTATAGGGTGTGGAAAGCGGACTACGACCGAG TAAAAATGGCCAGAAAGAGTGCCAGCAGCGACTAATTTGTTGCCAAGCCCATCGCACAGT GAATGATGGGCTAAATAAAATTCTTAGCTGAAGAGAACCCCATGATTCTATCTCGGATAT TTCTTCATACAGGAGCAGGAGCAGCCTGACTGTCGGGCAGAGCCTTGTTTTGATCATGGC CAGTGAGCCATTGAGACTGAGCTATTGGTTGATCGGACTACTACAACCTTCAGATTTGGT TCAATTGAATGTTTTTGCTTACCGTTTTGCCTAAGCCAATGTTATGTTGTATCCCGGCCA CTGCAAAATCTTTGCAGAGCAATACTCTGATCAGTTGTTAAAGGAAAACCGAAGGTAGAA ACATCGTTAATTATCTGACGATATTCAGGC