Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0336700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:12492933:12500010:1 gene:Os03g0336700 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP/25A core domain containing protein. (Os03t0336700-01);Hypothetical conserved gene. (Os03t0336700-02)
Sequence	ATGATGGCGGGCGGTGGGGGTGGGGGAGGGGGAGGGACGCTGGCGGCGGCGATGGCGAGG GCGGCGCCGGGGGCGGCGGCGATCCCGGCGGGGGCGGTGGCGCGCGCGGAGGAGGCGGCG GGCGAGGTGGTGCGGCGGGTGCGGCCCACGGAGGCATCCGAGCGGCGCCGCGCGGCGGTC GTCGGGTACGCGCGGAGGCTCGTCGGCACCGCGCTCGGCTGCGAGGTCTTTGCATATGGA TCAGTTCCATTGAAGACTTACCTTCCTGATGGGGACGTTGATCTGACTGTACTCGGCAAT ACATCTTATGGTAGTACTTTAATTGATGATATCTACCACATCCTTCAGTCAGAAGAGCAG AATTGTGATGCTGAATTTGAAGTAAAGGACTTGCAACTGATCAATGCTGAGGTCAGACTT ATTAAATGCACTATTGAAAATATTGTCGTTGACATCTCATTCAACCAAACTGGTGGAATC TGCGCACTTTGCTTCCTTGAGCTGGTTGACCGTAAAGTTGGAAAAAATCATCTAGTCAAG AATAGCATTATATTAATCAAGGCATGGTGTTATTATGAAAGTCGTCTACTAGGAGCTCAT CATGGACTGATATCAACTTACGCACTGGAAACTCTTATTCTTTACATATTCAATCTATTC CACAAATCTCTCCATGGCCCTCTGGAGGTTTTATATAGGTTTCTGGAGTATTTCAGCAAG TTTGACTGGGACAACTATTGCATAAGTTTAAATGGCCCTGTTGCATTATCGTCTTTGCCA AATCAAATTGTCGAAGCAACAAATACACCTGGCAGTGATTTGCTGTTTGACAAAGAGTTC CTCAATAACTCGGTGCAAAAAACAGATTCTAATGCATGCAATACTGAGTTCCGTTCAAAA TATCTGAACATAATTGATCCACTAAAGGAACACAACAATCTTGGCAGAAGTGTGAACAAA GCCAGCTTTAATCGTATTCGGACTGCTTTTTCGTATGGTGCTCAGAAGCTTGGTCAAGTT CTCTTGTTACAACCAGAACTTATTCCTGATGAAATTTATGGATTTTTCAAGAATACATTG AATAGGATTGGAAGTGGAGTAAGGCCAGACATTGGAGATGAAAGCTATAATGATGCATTT CGTTGTGAGTCCTTCCTTGGTCCTGGCAAGGCATTGTGGGATGAGATGTCGAGCATGAAA ATTTCCTGCAATAATCAAGATGAGAACAGAGGTCCTCACCATCTTTCAAAGTGCTTAGTT AACAATGACTCATATGCCACCTTGAATGTGCCTACACATTTTCATGGAGATCACATGGTA GCATCAAGTACTGATTTGAGTCTAAAATCGTCCTGTTTCATCCAAGAGACACCAAATCAG TATCCTTTGTTTTACCTAGAAGATGGCAATGGTAGCAGCGAACAGTACTTGGACCATGAA ATGGTGGAACAGGCATCTTGTTGTACAGCTGAAACCTGCCATGCGAATGAAGAACCATCA ATGCATCCACAAGTTTATCCAAACAATACGTTACATACATTTTACTCAAGTTTGGCCAAT AATTTGGAATATTCCAAATCTGGTCAGTCAGACATGACAAATTCGAGTATAAATGTTGCC CATGAGGAAAAACAAAAATTTTCTCCCTCCCCATTGAGCTTGGTGGATCTATCAGGTGAT CTAGATTTGCAATTGAGATGCCTCCGCCAAGTTCAGTATCACCTAGAATACATGTTTGAT GGTTTTTTGCAGTCTGTTCAAGAAGCATCTTCTGACTGTAAGGTTGCAAGGGACTCGTTT GAAATTCCAGCTGTTAACATCACATCGAATTCTGATGTGGTGCTGCCAGGTCTGTTATCA CCTTCATCTACTGAAACTGATGAGAGGAGATTATCTCCAGTTTCCTCTTCTCATAGCACC GAAGATTCTTCACAGCAGTCACATGATGAGAGCAACTGGGGTGCGTCTTGTCAGCAGAAC TTTTTATTAATACCCTCTCAAACAATTGCTCCAACCAATGGACTGTCACCATGTTCTTCT TATGCTAATTCAGATAATTCTGTTCAATTGTATGATAGCTCAGATGATATCTCCAATATG CATGAAACAGATCAACATATTCTCCAAAAGCACATGGTATCTTTAGGACAGAACAAGACA CTAATCAATCGACAAGTGAGAGTTAAAAGCAATCAAGCATCAGTTCCAAAAGGAAAATTT TCCATTTGTAAGGAGCAAATAACACAAGACACTGCAACCAAGGACATAAAGTTAAGCCGG CATTTGAGAGTCAAGGACAGTGAGCATGAATATATAAGCACTGCTAAGAAGATTTCGAGC TATAATTGTGACACTTGCTTAGAATGTGTCAAACCTGAAAGTGAAGCAATGATACCAAGG CATTACAAGCATGCCCGCTCAAGCAAGAACTCATTTGAGCATCGGATTTATGATATTGAC ATGGGGTTTGCCCGATCTGGTAGTTCACGGAATCAAATGCCAAAATATCAATCACTGAAG AATCAGGATATGTCAAGCTTAAATGTCCAAAAAGAGCATGAAATTAACTGGCCCAGAAAA CAAATGCCATCCGAGCTGTTGAAGCTCCAAAACAGTCTACGTGGCAGGGCTTGCTCAAAC AAGAAATTAGCTGCAAAACAAATTAACAATAATCACAAAGAACATCTATCTTTTGTAAGG GATCCAGAACAGATGCCATATAATCAGGTTAACTCAAACAAAGAGTTTGAGACTGTTGGC AAATCCAGCCAATTATTGCCACGGGTACAGCTCTCTCTTCATAACGACAGAAGCCTTACA GCATCTACTTGTCAGTCCTCATTCCCTGTGACAAAAGGATCTACTCAATTCAACGACTTG GAGATGCCTTCACTAGAAAATATTGAGTTTGGAACTTTGGGGTCTTTTTCATTGACACTT GTGTCACCAAAATCGAATAAGAATCCCAACACACACTCAACCAGTAAGACATGTGCCGAT GCTGCTGCATTGGCATTGCAAAGCCATCCAACACAAAGCAGGTCACCAGGATTCTACAAA GTTGGAGATGAAGATCACTTCCCACCTCTCCGTGCTGGGACTCGCTGA

Peptide Sequence

PEP ID	Os03t0336700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:12492933:12500010:1 gene:Os03g0336700 transcript:Os03t0336700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP/25A core domain containing protein. (Os03t0336700-01);Hypothetical conserved gene. (Os03t0336700-02)
Sequence	MMAGGGGGGGGGTLAAAMARAAPGAAAIPAGAVARAEEAAGEVVRRVRPTEASERRRAAV VGYARRLVGTALGCEVFAYGSVPLKTYLPDGDVDLTVLGNTSYGSTLIDDIYHILQSEEQ NCDAEFEVKDLQLINAEVRLIKCTIENIVVDISFNQTGGICALCFLELVDRKVGKNHLVK NSIILIKAWCYYESRLLGAHHGLISTYALETLILYIFNLFHKSLHGPLEVLYRFLEYFSK FDWDNYCISLNGPVALSSLPNQIVEATNTPGSDLLFDKEFLNNSVQKTDSNACNTEFRSK YLNIIDPLKEHNNLGRSVNKASFNRIRTAFSYGAQKLGQVLLLQPELIPDEIYGFFKNTL NRIGSGVRPDIGDESYNDAFRCESFLGPGKALWDEMSSMKISCNNQDENRGPHHLSKCLV NNDSYATLNVPTHFHGDHMVASSTDLSLKSSCFIQETPNQYPLFYLEDGNGSSEQYLDHE MVEQASCCTAETCHANEEPSMHPQVYPNNTLHTFYSSLANNLEYSKSGQSDMTNSSINVA HEEKQKFSPSPLSLVDLSGDLDLQLRCLRQVQYHLEYMFDGFLQSVQEASSDCKVARDSF EIPAVNITSNSDVVLPGLLSPSSTETDERRLSPVSSSHSTEDSSQQSHDESNWGASCQQN FLLIPSQTIAPTNGLSPCSSYANSDNSVQLYDSSDDISNMHETDQHILQKHMVSLGQNKT LINRQVRVKSNQASVPKGKFSICKEQITQDTATKDIKLSRHLRVKDSEHEYISTAKKISS YNCDTCLECVKPESEAMIPRHYKHARSSKNSFEHRIYDIDMGFARSGSSRNQMPKYQSLK NQDMSSLNVQKEHEINWPRKQMPSELLKLQNSLRGRACSNKKLAAKQINNNHKEHLSFVR DPEQMPYNQVNSNKEFETVGKSSQLLPRVQLSLHNDRSLTASTCQSSFPVTKGSTQFNDL EMPSLENIEFGTLGSFSLTLVSPKSNKNPNTHSTSKTCADAAALALQSHPTQSRSPGFYK VGDEDHFPPLRAGTR

Transcript Sequence

Transcript ID	Os03t0336700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12492933:12500010:1 gene:Os03g0336700 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP/25A core domain containing protein. (Os03t0336700-01);Hypothetical conserved gene. (Os03t0336700-02)
Sequence	GGTTTTCCCCCAAACCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTC CATTTGCTGTGCCCGGATCCCGCATGGCCACCGGCGGCGGGGTCTAGGAGGAGGAGGATG ATGGCGGGCGGTGGGGGTGGGGGAGGGGGAGGGACGCTGGCGGCGGCGATGGCGAGGGCG GCGCCGGGGGCGGCGGCGATCCCGGCGGGGGCGGTGGCGCGCGCGGAGGAGGCGGCGGGC GAGGTGGTGCGGCGGGTGCGGCCCACGGAGGCATCCGAGCGGCGCCGCGCGGCGGTCGTC GGGTACGCGCGGAGGCTCGTCGGCACCGCGCTCGGCTGCGAGGTCTTTGCATATGGATCA GTTCCATTGAAGACTTACCTTCCTGATGGGGACGTTGATCTGACTGTACTCGGCAATACA TCTTATGGTAGTACTTTAATTGATGATATCTACCACATCCTTCAGTCAGAAGAGCAGAAT TGTGATGCTGAATTTGAAGTAAAGGACTTGCAACTGATCAATGCTGAGGTCAGACTTATT AAATGCACTATTGAAAATATTGTCGTTGACATCTCATTCAACCAAACTGGTGGAATCTGC GCACTTTGCTTCCTTGAGCTGGTTGACCGTAAAGTTGGAAAAAATCATCTAGTCAAGAAT AGCATTATATTAATCAAGGCATGGTGTTATTATGAAAGTCGTCTACTAGGAGCTCATCAT GGACTGATATCAACTTACGCACTGGAAACTCTTATTCTTTACATATTCAATCTATTCCAC AAATCTCTCCATGGCCCTCTGGAGGTTTTATATAGGTTTCTGGAGTATTTCAGCAAGTTT GACTGGGACAACTATTGCATAAGTTTAAATGGCCCTGTTGCATTATCGTCTTTGCCAAAT CAAATTGTCGAAGCAACAAATACACCTGGCAGTGATTTGCTGTTTGACAAAGAGTTCCTC AATAACTCGGTGCAAAAAACAGATTCTAATGCATGCAATACTGAGTTCCGTTCAAAATAT CTGAACATAATTGATCCACTAAAGGAACACAACAATCTTGGCAGAAGTGTGAACAAAGCC AGCTTTAATCGTATTCGGACTGCTTTTTCGTATGGTGCTCAGAAGCTTGGTCAAGTTCTC TTGTTACAACCAGAACTTATTCCTGATGAAATTTATGGATTTTTCAAGAATACATTGAAT AGGATTGGAAGTGGAGTAAGGCCAGACATTGGAGATGAAAGCTATAATGATGCATTTCGT TGTGAGTCCTTCCTTGGTCCTGGCAAGGCATTGTGGGATGAGATGTCGAGCATGAAAATT TCCTGCAATAATCAAGATGAGAACAGAGGTCCTCACCATCTTTCAAAGTGCTTAGTTAAC AATGACTCATATGCCACCTTGAATGTGCCTACACATTTTCATGGAGATCACATGGTAGCA TCAAGTACTGATTTGAGTCTAAAATCGTCCTGTTTCATCCAAGAGACACCAAATCAGTAT CCTTTGTTTTACCTAGAAGATGGCAATGGTAGCAGCGAACAGTACTTGGACCATGAAATG GTGGAACAGGCATCTTGTTGTACAGCTGAAACCTGCCATGCGAATGAAGAACCATCAATG CATCCACAAGTTTATCCAAACAATACGTTACATACATTTTACTCAAGTTTGGCCAATAAT TTGGAATATTCCAAATCTGGTCAGTCAGACATGACAAATTCGAGTATAAATGTTGCCCAT GAGGAAAAACAAAAATTTTCTCCCTCCCCATTGAGCTTGGTGGATCTATCAGGTGATCTA GATTTGCAATTGAGATGCCTCCGCCAAGTTCAGTATCACCTAGAATACATGTTTGATGGT TTTTTGCAGTCTGTTCAAGAAGCATCTTCTGACTGTAAGGTTGCAAGGGACTCGTTTGAA ATTCCAGCTGTTAACATCACATCGAATTCTGATGTGGTGCTGCCAGGTCTGTTATCACCT TCATCTACTGAAACTGATGAGAGGAGATTATCTCCAGTTTCCTCTTCTCATAGCACCGAA GATTCTTCACAGCAGTCACATGATGAGAGCAACTGGGGTGCGTCTTGTCAGCAGAACTTT TTATTAATACCCTCTCAAACAATTGCTCCAACCAATGGACTGTCACCATGTTCTTCTTAT GCTAATTCAGATAATTCTGTTCAATTGTATGATAGCTCAGATGATATCTCCAATATGCAT GAAACAGATCAACATATTCTCCAAAAGCACATGGTATCTTTAGGACAGAACAAGACACTA ATCAATCGACAAGTGAGAGTTAAAAGCAATCAAGCATCAGTTCCAAAAGGAAAATTTTCC ATTTGTAAGGAGCAAATAACACAAGACACTGCAACCAAGGACATAAAGTTAAGCCGGCAT TTGAGAGTCAAGGACAGTGAGCATGAATATATAAGCACTGCTAAGAAGATTTCGAGCTAT AATTGTGACACTTGCTTAGAATGTGTCAAACCTGAAAGTGAAGCAATGATACCAAGGCAT TACAAGCATGCCCGCTCAAGCAAGAACTCATTTGAGCATCGGATTTATGATATTGACATG GGGTTTGCCCGATCTGGTAGTTCACGGAATCAAATGCCAAAATATCAATCACTGAAGAAT CAGGATATGTCAAGCTTAAATGTCCAAAAAGAGCATGAAATTAACTGGCCCAGAAAACAA ATGCCATCCGAGCTGTTGAAGCTCCAAAACAGTCTACGTGGCAGGGCTTGCTCAAACAAG AAATTAGCTGCAAAACAAATTAACAATAATCACAAAGAACATCTATCTTTTGTAAGGGAT CCAGAACAGATGCCATATAATCAGGTTAACTCAAACAAAGAGTTTGAGACTGTTGGCAAA TCCAGCCAATTATTGCCACGGGTACAGCTCTCTCTTCATAACGACAGAAGCCTTACAGCA TCTACTTGTCAGTCCTCATTCCCTGTGACAAAAGGATCTACTCAATTCAACGACTTGGAG ATGCCTTCACTAGAAAATATTGAGTTTGGAACTTTGGGGTCTTTTTCATTGACACTTGTG TCACCAAAATCGAATAAGAATCCCAACACACACTCAACCAGTAAGACATGTGCCGATGCT GCTGCATTGGCATTGCAAAGCCATCCAACACAAAGCAGGTCACCAGGATTCTACAAAGTT GGAGATGAAGATCACTTCCCACCTCTCCGTGCTGGGACTCGCTGAGACTTTCGGTACATA CACAGATGATACAGTTGATCATAGGTTTAGAGAACTAAAAGGTAAAGAGAAGAGCTAACA GGTTGAGCTTTTTTCATAACCTCAGGAGAGCGCAAATGCGAGGATTCTAATAGCATATAT ATTCGTCCATGTAAAGTTCTGTCGATCTCTTGTCCTCCTCAATTGTCTATAGTTAGGCCA AGAAGGCTAATGGGTAGCAACTAATTATACCATTGTAGTTCTTTTACCTTAAGTTTAACT TGAAAGAAGAAAAAATCGGGGGAATATGTTAGCTT