Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0336100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:12447241:12449022:-1 gene:Os03g0336100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cupin domain containing protein 3.2 description:11-S plant seed storage protein family protein. (Os03t0336100-01)
Sequence

ATGCACAAGGACGAGCTCGTGGAGAAGAACCTCAAGATGGGCGACGTCCTCCACATCGAC
GCCGGCTCGACGTTCTACATGGTCAACTCCGGCAAGGGCCAGAGGCTGAAGATCATCTGC
AGCATCGACGCCTCCGATAACATCGGCTTCGGCCCTTATCAGGCCTTCTTCCTTGGTGGT
GGCGGCGGCGCGGCGGCCGGGCAGTGGAGGCCAGTGGGCAGAGGCGAGGAGGAGGAGGAG
GAGGAGGAGGAGTTGGTGGTGGACGAAGCGTCGTCGACGTGGTCGTGGACGAAGCTCGTG
GGCCGTCTCCTCGGAGTGGTCGGAGGCGGGGCGCCGTCCAACTCCGTGGCCGCGCAGCCG
AAGAAGAAGAAGGACAAGACGGTGCGCGCGCCGGAGCCGTACAACCTCTACGAGCAGGGC
ACCGGCTTCCGCAACGCCTACGGATCCAGCGTCGCCGTCGACAAGCACGACTACGAGCCC
CTCGGCCACTCCGACATCGGCGTCTATCTCGTCAACCTCACCGCCGGATCGATGATGGCG
CCGCACGTGAACCCGAGGGCGACGGAGTACGGCGTCGTGCTCAGCGGGACGGGCTGCATC
GAGGTCGTGTTCCCGAACGGGTCGAAGGCGATGAGCGCGACGGTGCGCGCCGGCGACGTG
TTCTACATCCCGCGCTACTTCCCGTTCTGCCAGGTGGCGTCGCGGGGCGGGCCGTTCGTG
TTCTTCGGGTTCACGACGTCGGCGCGGCGGAACCACCCTCAGTTCCTCGTCGGCGGCTCC
TCCGTGCTCCGCGCCCTGCTCGGGACGGAGCTCGCCGCCGCGTTCGGCGTCCCGGAGAAG
GCGATGAGGAAGCTGGTGCTGGCGCAGAATGAGGCGGTGATCCTGCCGTCCTGGCCGGAG
AAGAAGAAGAAGAAGAAGTGGGAGGAGGAGCCCGAGGACGAGAGGTGGGAGGAGAAGAAG
AAGGCGGCGAAGCAGAGGAAGCCATGGGTTATCGAGCAGGTGCCGGCGAAGTAG

Peptide Sequence

PEP ID

Os03t0336100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:12447241:12449022:-1 gene:Os03g0336100 transcript:Os03t0336100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cupin domain containing protein 3.2 description:11-S plant seed storage protein family protein. (Os03t0336100-01)
Sequence

MHKDELVEKNLKMGDVLHIDAGSTFYMVNSGKGQRLKIICSIDASDNIGFGPYQAFFLGG
GGGAAAGQWRPVGRGEEEEEEEEELVVDEASSTWSWTKLVGRLLGVVGGGAPSNSVAAQP
KKKKDKTVRAPEPYNLYEQGTGFRNAYGSSVAVDKHDYEPLGHSDIGVYLVNLTAGSMMA
PHVNPRATEYGVVLSGTGCIEVVFPNGSKAMSATVRAGDVFYIPRYFPFCQVASRGGPFV
FFGFTTSARRNHPQFLVGGSSVLRALLGTELAAAFGVPEKAMRKLVLAQNEAVILPSWPE
KKKKKKWEEEPEDERWEEKKKAAKQRKPWVIEQVPAK

Transcript Sequence

Transcript ID

Os03t0336100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12447241:12449022:-1 gene:Os03g0336100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cupin domain containing protein 3.2 description:11-S plant seed storage protein family protein. (Os03t0336100-01)
Sequence

TGGATGCACAAGGACGAGCTCGTGGAGAAGAACCTCAAGATGGGCGACGTCCTCCACATC
GACGCCGGCTCGACGTTCTACATGGTCAACTCCGGCAAGGGCCAGAGGCTGAAGATCATC
TGCAGCATCGACGCCTCCGATAACATCGGCTTCGGCCCTTATCAGGCCTTCTTCCTTGGT
GGTGGCGGCGGCGCGGCGGCCGGGCAGTGGAGGCCAGTGGGCAGAGGCGAGGAGGAGGAG
GAGGAGGAGGAGGAGTTGGTGGTGGACGAAGCGTCGTCGACGTGGTCGTGGACGAAGCTC
GTGGGCCGTCTCCTCGGAGTGGTCGGAGGCGGGGCGCCGTCCAACTCCGTGGCCGCGCAG
CCGAAGAAGAAGAAGGACAAGACGGTGCGCGCGCCGGAGCCGTACAACCTCTACGAGCAG
GGCACCGGCTTCCGCAACGCCTACGGATCCAGCGTCGCCGTCGACAAGCACGACTACGAG
CCCCTCGGCCACTCCGACATCGGCGTCTATCTCGTCAACCTCACCGCCGGATCGATGATG
GCGCCGCACGTGAACCCGAGGGCGACGGAGTACGGCGTCGTGCTCAGCGGGACGGGCTGC
ATCGAGGTCGTGTTCCCGAACGGGTCGAAGGCGATGAGCGCGACGGTGCGCGCCGGCGAC
GTGTTCTACATCCCGCGCTACTTCCCGTTCTGCCAGGTGGCGTCGCGGGGCGGGCCGTTC
GTGTTCTTCGGGTTCACGACGTCGGCGCGGCGGAACCACCCTCAGTTCCTCGTCGGCGGC
TCCTCCGTGCTCCGCGCCCTGCTCGGGACGGAGCTCGCCGCCGCGTTCGGCGTCCCGGAG
AAGGCGATGAGGAAGCTGGTGCTGGCGCAGAATGAGGCGGTGATCCTGCCGTCCTGGCCG
GAGAAGAAGAAGAAGAAGAAGTGGGAGGAGGAGCCCGAGGACGAGAGGTGGGAGGAGAAG
AAGAAGGCGGCGAAGCAGAGGAAGCCATGGGTTATCGAGCAGGTGCCGGCGAAGTAGTAA
CTAAGCCCGCGTAAGCTAGCTGCTTAACTCTGATTAAGCATGTGAGCTATCTATCAATCC
ATGCTTAGGTATGCAGCTGGTTAACTTTGTTTTGCTGTCCAAACTTTTGTAACCATGGGC
GTGTCTGCTCAACTTATGTTTGCGCTCTTCGTGTTGCTTCGGCGTCGCGTTAATAAATAA
AGATGCTTCTGCTTTT