Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0335500-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:12411298:12415106:1 gene:Os03g0335500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os03t0335500-01);Protein kinase, core domain containing protein. (Os03t0335500-02)
Sequence	ATGCGGGCTCTGGTGGTGCTGGTTGGCTTGGCCTGCCTCGCCTTCGTGGCGGAGGCCAAG GGCGGCGGCGCGGCCTCGGCGGCGGCGCTGGACGACGACGTGCTGGGGCTGATCGTGTTC AAGGCCGACGTGGTGGACCCGGAGGGGCGGCTCGCGACGTGGAGCGAGGACGACGAGCGG CCGTGCGCTTGGGCCGGTGTCACCTGCGACCCGCTCACCGGCCGCGTCGCGGGGCTCTCC CTCGCCGGCTTCGGCCTCTCCGGCAAGCTCGGCCGCGGCCTCCTCCGCCTCGAGTCGCTC CAGTCCCTCTCGCTCTCCGGCAACAACTTCTCCGGCGACCTCCCCGCCGACCTCGCCCGC CTCCCGGACCTCCAGTCGCTGGACCTCAGCGCCAACGCTTTCTCGGGCGCCATCCCGGAC GGCTTCTTCGGCCACTGCCGCAACCTCCGCGACGTCTCCCTGGCCAACAACGCCTTCTCC GGCGACGTCCCGCGCGACGTCGGCGCGTGCGCCACGCTCGCGTCGCTGAACCTGTCCTCC AACCGCCTCGCCGGCGCGCTGCCGAGCGATATCTGGTCACTGAACGCCCTGCGCACGCTG GACCTCTCCGGCAACGCCATCACCGGCGACTTGCCGGTCGGCGTTAGCAGGATGTTCAAC CTGCGGTCGCTGAACCTGCGGAGCAACCGCCTCGCAGGCAGCCTCCCCGACGACATTGGG GATTGCCCGCTGCTGAGGTCAGTGGACCTCGGCTCCAACAACATCTCTGGCAACCTGCCG GAGTCGCTGCGGAGGCTCTCCACTTGCACATACCTTGACCTGAGCTCAAACGCGCTCACC GGCAATGTTCCAACTTGGGTTGGAGAAATGGCAAGCTTGGAGACGCTTGATTTGTCCGGG AACAAGTTTTCCGGGGAGATCCCGGGGTCGATTGGCGGGTTGATGTCATTGAAGGAGCTG AGGCTGTCGGGGAATGGGTTCACCGGTGGCTTGCCGGAGTCAATTGGTGGATGCAAGAGC CTAGTGCATGTTGATGTGAGCTGGAATTCTCTGACCGGCACCCTGCCTTCCTGGGTCTTT GCTTCCGGCGTGCAATGGGTATCGGTGTCGGACAACACCTTGAGTGGAGAGGTGTTTGTA CCTGTGAATGCATCTTCGATGGTTCGAGGCGTGGATTTGTCGAGCAATGCGTTTTCAGGA ATGATCCCATCTGAAATCTCCCAGGTGATCACCTTGCAGTCACTGAACATGTCCTGGAAC TCGCTGTCTGGGAGTATTCCGCCGAGCATTGTGCAGATGAAGTCACTTGAGGTGCTTGAT TTGACTGCGAACAGGCTCAATGGAAGCATTCCAGCTACTGTTGGAGGAGAGTCATTGAGA GAGTTGAGGCTGGCGAAGAACTCCCTTACTGGAGAAATCCCAGCACAGATTGGCAATCTC TCTGCCCTTGCATCACTGGATCTCTCACACAACAACCTGACAGGCGCAATTCCGGCAACA ATAGCCAACATCACCAACCTGCAGACTGTTGATCTTTCTCGGAACAAGCTCACTGGTGGT CTACCAAAGCAGCTCTCTGACCTGCCTCACCTTGTACGCTTCAATATTTCACATAATCAG CTCTCTGGGGATCTCCCTCCTGGGAGCTTTTTTGACACTATCCCCCTCTCATCAGTGTCT GACAATCCTGGCCTTTGTGGTGCAAAGCTAAATTCTTCTTGTCCTGGTGTGTTACCAAAG CCAATTGTGCTGAACCCAGACTCTTCTTCGGATCCACTATCACAACCCGAGCCTACACCA AATGGCCTACGTCACAAGAAAACTATACTAAGCATCTCAGCCCTTGTCGCAATTGGTGCT GCTGTTCTCATTACTGTTGGTGTCATAACCATTACAGTTCTCAACCTTCGAGTGCGCACT CCAGGCTCTCATTCTGCTGCTGAGCTAGAACTCTCTGATGGATATCTCAGCCAGTCCCCC ACAACTGATGTGAATTCAGGCAAGCTTGTCATGTTTGGAGGCGGTAATCCAGAATTCAGT GCTAGTACCCACGCTCTCCTGAACAAGGACTGTGAGCTTGGTCGTGGTGGGTTTGGCACT GTCTATAAGACTACTCTGCGAGATGGCCAACCTGTTGCCATCAAGAAACTGACTGTGTCT AGCTTGGTTAAATCTCAAGATGAGTTTGAGAGAGAAGTGAAGATGCTAGGCAAGCTACGC CACCGCAACCTTGTTGCGCTCAAGGGATATTATTGGACACCATCACTTCAGCTTCTTATA TATGAGTTTGTTTCTGGGGGTAACTTACATAAACAACTGCATGAATCATCCACTGCAAAT TGTCTCTCATGGAAAGAGAGGTTTGATATAGTTCTTGGCATTGCAAGAAGCCTGGCCCAT CTCCACCGCCATGACATTATCCACTACAATCTGAAGTCAAGCAACATTCTGCTTGATGGA TCAGGCGATGCCAAGGTGGGGGACTACGGATTGGCAAAGCTTCTGCCGATGTTGGATCGG TATGTTCTAAGCAGTAAGGTCCAGAGTGCACTTGGTTACATGGCACCAGAGTTTGCGTGC AGGACTGTGAAGATCACTGAAAAGTGTGACGTGTATGGATTTGGAGTTCTTGCCCTTGAG ATATTGACAGGGAGGACACCGGTGCAGTACATGGAAGATGATGTTATTGTGCTTTGCGAT GTGGTAAGGGCTGCTTTGGATGAAGGGAAGGTGGAAGAGTGTGTTGATGAGAGGCTCTGC GGAAAATTTCCGCTAGAGGAGGCTGTTCCAATCATGAAACTTGGTCTAGTGTGCACTTCT CAGGTTCCTTCCAATAGGCCAGACATGAGTGAGGTGGTGAACATACTGGAGTTGATCAGA TGCCCCCAGGATAGCCCTGAAACTGAATTAGGTTAA

Peptide Sequence

PEP ID	Os03t0335500-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:12411298:12415106:1 gene:Os03g0335500 transcript:Os03t0335500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os03t0335500-01);Protein kinase, core domain containing protein. (Os03t0335500-02)
Sequence	MRALVVLVGLACLAFVAEAKGGGAASAAALDDDVLGLIVFKADVVDPEGRLATWSEDDER PCAWAGVTCDPLTGRVAGLSLAGFGLSGKLGRGLLRLESLQSLSLSGNNFSGDLPADLAR LPDLQSLDLSANAFSGAIPDGFFGHCRNLRDVSLANNAFSGDVPRDVGACATLASLNLSS NRLAGALPSDIWSLNALRTLDLSGNAITGDLPVGVSRMFNLRSLNLRSNRLAGSLPDDIG DCPLLRSVDLGSNNISGNLPESLRRLSTCTYLDLSSNALTGNVPTWVGEMASLETLDLSG NKFSGEIPGSIGGLMSLKELRLSGNGFTGGLPESIGGCKSLVHVDVSWNSLTGTLPSWVF ASGVQWVSVSDNTLSGEVFVPVNASSMVRGVDLSSNAFSGMIPSEISQVITLQSLNMSWN SLSGSIPPSIVQMKSLEVLDLTANRLNGSIPATVGGESLRELRLAKNSLTGEIPAQIGNL SALASLDLSHNNLTGAIPATIANITNLQTVDLSRNKLTGGLPKQLSDLPHLVRFNISHNQ LSGDLPPGSFFDTIPLSSVSDNPGLCGAKLNSSCPGVLPKPIVLNPDSSSDPLSQPEPTP NGLRHKKTILSISALVAIGAAVLITVGVITITVLNLRVRTPGSHSAAELELSDGYLSQSP TTDVNSGKLVMFGGGNPEFSASTHALLNKDCELGRGGFGTVYKTTLRDGQPVAIKKLTVS SLVKSQDEFEREVKMLGKLRHRNLVALKGYYWTPSLQLLIYEFVSGGNLHKQLHESSTAN CLSWKERFDIVLGIARSLAHLHRHDIIHYNLKSSNILLDGSGDAKVGDYGLAKLLPMLDR YVLSSKVQSALGYMAPEFACRTVKITEKCDVYGFGVLALEILTGRTPVQYMEDDVIVLCD VVRAALDEGKVEECVDERLCGKFPLEEAVPIMKLGLVCTSQVPSNRPDMSEVVNILELIR CPQDSPETELG

Transcript Sequence

Transcript ID	Os03t0335500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12411298:12415106:1 gene:Os03g0335500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os03t0335500-01);Protein kinase, core domain containing protein. (Os03t0335500-02)
Sequence	ACTTCCCACTCCCACTCCGCCCACTCCCTCCTTCTCCCCTCCCCTCTCCCACTGCAATGG CGTTCTCCGGTAAGCCGGCGGCGACGTAGACGGCCGGCGGCGTGCACGCGGGGAAGAAGG TGCCGTTTGAATCTTGGAGGCCAATCTTCTGAAGATTCAGGCGAAGCTCGTCGTCTCCTG GGCGCGTTCTTGCGGCGTTTCTTGGAGCATTTTGGCTCGCCGCCGGCGGCCTTGCGCGTT CCGGCTTCCGAGGCAAGAAGGCCATCCTTTTTTTTTCTTGCTGCTCGTGCGCGTTTCGGC TCTCCGGAGTCGCGGCAATGCGGGCTCTGGTGGTGCTGGTTGGCTTGGCCTGCCTCGCCT TCGTGGCGGAGGCCAAGGGCGGCGGCGCGGCCTCGGCGGCGGCGCTGGACGACGACGTGC TGGGGCTGATCGTGTTCAAGGCCGACGTGGTGGACCCGGAGGGGCGGCTCGCGACGTGGA GCGAGGACGACGAGCGGCCGTGCGCTTGGGCCGGTGTCACCTGCGACCCGCTCACCGGCC GCGTCGCGGGGCTCTCCCTCGCCGGCTTCGGCCTCTCCGGCAAGCTCGGCCGCGGCCTCC TCCGCCTCGAGTCGCTCCAGTCCCTCTCGCTCTCCGGCAACAACTTCTCCGGCGACCTCC CCGCCGACCTCGCCCGCCTCCCGGACCTCCAGTCGCTGGACCTCAGCGCCAACGCTTTCT CGGGCGCCATCCCGGACGGCTTCTTCGGCCACTGCCGCAACCTCCGCGACGTCTCCCTGG CCAACAACGCCTTCTCCGGCGACGTCCCGCGCGACGTCGGCGCGTGCGCCACGCTCGCGT CGCTGAACCTGTCCTCCAACCGCCTCGCCGGCGCGCTGCCGAGCGATATCTGGTCACTGA ACGCCCTGCGCACGCTGGACCTCTCCGGCAACGCCATCACCGGCGACTTGCCGGTCGGCG TTAGCAGGATGTTCAACCTGCGGTCGCTGAACCTGCGGAGCAACCGCCTCGCAGGCAGCC TCCCCGACGACATTGGGGATTGCCCGCTGCTGAGGTCAGTGGACCTCGGCTCCAACAACA TCTCTGGCAACCTGCCGGAGTCGCTGCGGAGGCTCTCCACTTGCACATACCTTGACCTGA GCTCAAACGCGCTCACCGGCAATGTTCCAACTTGGGTTGGAGAAATGGCAAGCTTGGAGA CGCTTGATTTGTCCGGGAACAAGTTTTCCGGGGAGATCCCGGGGTCGATTGGCGGGTTGA TGTCATTGAAGGAGCTGAGGCTGTCGGGGAATGGGTTCACCGGTGGCTTGCCGGAGTCAA TTGGTGGATGCAAGAGCCTAGTGCATGTTGATGTGAGCTGGAATTCTCTGACCGGCACCC TGCCTTCCTGGGTCTTTGCTTCCGGCGTGCAATGGGTATCGGTGTCGGACAACACCTTGA GTGGAGAGGTGTTTGTACCTGTGAATGCATCTTCGATGGTTCGAGGCGTGGATTTGTCGA GCAATGCGTTTTCAGGAATGATCCCATCTGAAATCTCCCAGGTGATCACCTTGCAGTCAC TGAACATGTCCTGGAACTCGCTGTCTGGGAGTATTCCGCCGAGCATTGTGCAGATGAAGT CACTTGAGGTGCTTGATTTGACTGCGAACAGGCTCAATGGAAGCATTCCAGCTACTGTTG GAGGAGAGTCATTGAGAGAGTTGAGGCTGGCGAAGAACTCCCTTACTGGAGAAATCCCAG CACAGATTGGCAATCTCTCTGCCCTTGCATCACTGGATCTCTCACACAACAACCTGACAG GCGCAATTCCGGCAACAATAGCCAACATCACCAACCTGCAGACTGTTGATCTTTCTCGGA ACAAGCTCACTGGTGGTCTACCAAAGCAGCTCTCTGACCTGCCTCACCTTGTACGCTTCA ATATTTCACATAATCAGCTCTCTGGGGATCTCCCTCCTGGGAGCTTTTTTGACACTATCC CCCTCTCATCAGTGTCTGACAATCCTGGCCTTTGTGGTGCAAAGCTAAATTCTTCTTGTC CTGGTGTGTTACCAAAGCCAATTGTGCTGAACCCAGACTCTTCTTCGGATCCACTATCAC AACCCGAGCCTACACCAAATGGCCTACGTCACAAGAAAACTATACTAAGCATCTCAGCCC TTGTCGCAATTGGTGCTGCTGTTCTCATTACTGTTGGTGTCATAACCATTACAGTTCTCA ACCTTCGAGTGCGCACTCCAGGCTCTCATTCTGCTGCTGAGCTAGAACTCTCTGATGGAT ATCTCAGCCAGTCCCCCACAACTGATGTGAATTCAGGCAAGCTTGTCATGTTTGGAGGCG GTAATCCAGAATTCAGTGCTAGTACCCACGCTCTCCTGAACAAGGACTGTGAGCTTGGTC GTGGTGGGTTTGGCACTGTCTATAAGACTACTCTGCGAGATGGCCAACCTGTTGCCATCA AGAAACTGACTGTGTCTAGCTTGGTTAAATCTCAAGATGAGTTTGAGAGAGAAGTGAAGA TGCTAGGCAAGCTACGCCACCGCAACCTTGTTGCGCTCAAGGGATATTATTGGACACCAT CACTTCAGCTTCTTATATATGAGTTTGTTTCTGGGGGTAACTTACATAAACAACTGCATG AATCATCCACTGCAAATTGTCTCTCATGGAAAGAGAGGTTTGATATAGTTCTTGGCATTG CAAGAAGCCTGGCCCATCTCCACCGCCATGACATTATCCACTACAATCTGAAGTCAAGCA ACATTCTGCTTGATGGATCAGGCGATGCCAAGGTGGGGGACTACGGATTGGCAAAGCTTC TGCCGATGTTGGATCGGTATGTTCTAAGCAGTAAGGTCCAGAGTGCACTTGGTTACATGG CACCAGAGTTTGCGTGCAGGACTGTGAAGATCACTGAAAAGTGTGACGTGTATGGATTTG GAGTTCTTGCCCTTGAGATATTGACAGGGAGGACACCGGTGCAGTACATGGAAGATGATG TTATTGTGCTTTGCGATGTGGTAAGGGCTGCTTTGGATGAAGGGAAGGTGGAAGAGTGTG TTGATGAGAGGCTCTGCGGAAAATTTCCGCTAGAGGAGGCTGTTCCAATCATGAAACTTG GTCTAGTGTGCACTTCTCAGGTTCCTTCCAATAGGCCAGACATGAGTGAGGTGGTGAACA TACTGGAGTTGATCAGATGCCCCCAGGATAGCCCTGAAACTGAATTAGGTTAAGCTCTAT CTGATGTGGTTCCCTTTTTTGTTAGTTTTCTTATTCCATTTTAAGATCCTTCTTTGCTTG GCAACTGATAAAATGATGAGACATGAAGGGGATTCTATCTGTTATGCTTAGTACTAGGAG CAAGTGTGAAGTTTCTGGGTAGTATTTTGGTAGCTAAGGAGTTATTATGTAATGCATGAA ATAGTTTCATGGCCTGTGGCTGTTGATGTGTTTGACTCTGATCCTCATCAGGATGTTAAC TGTTGTGGATCCTCTCACATCAATTATATATGCTGTTTCC