Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0335300-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:12401975:12408443:1 gene:Os03g0335300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting receptor homolog (Fragment). (Os03t0335300-01);Similar to Vacuolar sorting receptor homolog (Fragment). (Os03t0335300-02);Similar to Vacuolar targeting receptor bp-80. (Os03t0335300-03)
Sequence	ATGAGGGGGCCGGTGCGGTGGGCGGTGGTGGTGGTGGTGATGGCGATGGTGGAGGCGGCG GCGGGGAGGTTCGTGGTGGAGAAGAACAGCCTGCGGGTGACGTCGCCGGAGGGGATCAAG GGGAAGTACGAGTGCGCCATCGGGAACTTCGGGGTGCCGCAGTACGGGGGGACCTTGCAT GGATGGGTCGAGTACCCCAAATCCAACCAGAAGGCTTGCAAGAGCTTCGAGGACTTCGAC ATCTCATTCAAGTCAACCCGGTCCGGAGGACGCCCGAAGTTCGTGCTCATCGACCGTGGA CAGTGCTATTTCACAACGAAGGCATGGAATGCACAAAATGCTGGGGCTGCAGCAGTTCTT GTTGTGGATGACAAGTCGGAGCCTTTAATCACAATGGATAACCCAGATGATGCTGGAACA GAGCACCTTGAAAACATCACTATTCCCTCTGTGCTTATAACGAAGAAATTGGGCGATGAC CTAAAAAAATCTGCTGAAAATGGTGATATGGTTAGCGTCCTTCTGGACTGGAGAGAATCT CTTCCACATCCTGATGAGCGTGTAGAGTATGAATTCTGGACAAACAGTAACGATGAATGT GGTCCGAAATGTGATATGCAAATGGACTTTGTTAAGAGCTTTAGAGGAACTGCACAAATT CTTGAGAAGAAGGGATACACCCAGTTCACTCCTCATTATATTACATGGTATTGCCCTGAA GCTTTTGTTGTGAGCAAGCAGTGCAAATCACAGTGTATCAATCATGGGAGGTATTGTGCA CCAGACCCAGAGCAGGATTTCAGCCAGGGATATGATGGAAAAGATGTTGTGGTTCAAAAT CTACATCAAATTTGTGTATTCAAGGCTGCTAATGAGAGTGGGAAGCCATGGTTGTGGTGG GACTATGTGCATGACTTCTCAATTAGGTGCCCTATGAAGGAGAAGAAATACACACCTGAA TGTGCTGTTCATGTTATTAAGTCACTCGGGTTGGATGTTGAGAAGATAAAGAAGTGTGTT GGAGATCCTGAAGCTGATGAGGAAAACCCTGTTCTGAAGGCAGAACAAGATGCCCAAATT GGTCATGATAAACGAGGAGATGTCACAATACTGCCAACCCTTGTCATCAACAACAGGCAA TATCGAGGTAAGTTGGACAAATCTGCCGTGCTCAAAGCAGTCTGCGCAGGATTTGAGGAG ACAACTGAGCCTGCTATTTGTTTGAGCGAGGATGTTCAAACAAATGAGTGTTTGGAAAAT AACGGAGGTTGCTGGCAAGATAGGGATAATAATGTTACTGCATGCAAGGATACCTTCCGT GGGCGTGTTTGTGAATGTCCCGTTGTGAAAGGTGTAAAGTTTGTTGGTGATGGGTACACC AATTGTGAAGCTTCTGGCATTGGTAGGTGCGAAATTAAAAATGGAGGATGCTGGAAAGAA ACTAGAAATGGCAAGACAATATCTGCCTGCTCAAATGAAGTATCTGAAGGCTGCAAATGT CCACCAGGTTTCAAGGGTGATGGAATAAAAAGTTGTGAAGATATTGATGAATGCAAGGAA AAACTTTACTGTCAATGCAAGGGCTGCAGCTGTGAGAATACATGGGGTAGCTATGAGTGC AGTTGTGGCGGTAACAACATGTTATACATGAGAGAGCATGACACTTGTCTCAGCAAGGAG GCTACGTCAGCTGTTGGCTGGAGTTTTCTGTGGGTTATTTTCTTTGGACTTGTTCTTGCT GGGGTCGGAGCATATGCGGTGTATAAATACAGGCTACGGAGCTACATGGATTCGGAGATT CGCGCGATCATGGCCCAGTACATGCCTTTGGATAACCAAGAAGCAGCTAACCAACATCAT GTCGCGCATGCTGGTGATGATATTTGA

Peptide Sequence

PEP ID	Os03t0335300-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:12401975:12408443:1 gene:Os03g0335300 transcript:Os03t0335300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting receptor homolog (Fragment). (Os03t0335300-01);Similar to Vacuolar sorting receptor homolog (Fragment). (Os03t0335300-02);Similar to Vacuolar targeting receptor bp-80. (Os03t0335300-03)
Sequence	MRGPVRWAVVVVVMAMVEAAAGRFVVEKNSLRVTSPEGIKGKYECAIGNFGVPQYGGTLH GWVEYPKSNQKACKSFEDFDISFKSTRSGGRPKFVLIDRGQCYFTTKAWNAQNAGAAAVL VVDDKSEPLITMDNPDDAGTEHLENITIPSVLITKKLGDDLKKSAENGDMVSVLLDWRES LPHPDERVEYEFWTNSNDECGPKCDMQMDFVKSFRGTAQILEKKGYTQFTPHYITWYCPE AFVVSKQCKSQCINHGRYCAPDPEQDFSQGYDGKDVVVQNLHQICVFKAANESGKPWLWW DYVHDFSIRCPMKEKKYTPECAVHVIKSLGLDVEKIKKCVGDPEADEENPVLKAEQDAQI GHDKRGDVTILPTLVINNRQYRGKLDKSAVLKAVCAGFEETTEPAICLSEDVQTNECLEN NGGCWQDRDNNVTACKDTFRGRVCECPVVKGVKFVGDGYTNCEASGIGRCEIKNGGCWKE TRNGKTISACSNEVSEGCKCPPGFKGDGIKSCEDIDECKEKLYCQCKGCSCENTWGSYEC SCGGNNMLYMREHDTCLSKEATSAVGWSFLWVIFFGLVLAGVGAYAVYKYRLRSYMDSEI RAIMAQYMPLDNQEAANQHHVAHAGDDI

Transcript Sequence

Transcript ID	Os03t0335300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12401975:12408443:1 gene:Os03g0335300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting receptor homolog (Fragment). (Os03t0335300-01);Similar to Vacuolar sorting receptor homolog (Fragment). (Os03t0335300-02);Similar to Vacuolar targeting receptor bp-80. (Os03t0335300-03)
Sequence	GACGGAACAACCAGCCGGCGACTGCGGCGACTCCGACTCCTCGCACGCACGCACGCACGC GGCCGTGGAAATCGCGCCGGCTCGCCTCCTCCCTCCCCACCCCCACCCGCTAGATCTCGC CGGCTTCCGTAGGTCGGTAGATCTCGCTGCCTCCTCCTCCTGGGAATCTCCGTCTCCTCC GCAAGATTCCAATCGGGAGGCGGCGGGGCGGCGGAGAAGCTCGCTTTGGTGGAGTAGTTT GACTAACCGGTGCGGCAGGATGAGGGGGCCGGTGCGGTGGGCGGTGGTGGTGGTGGTGAT GGCGATGGTGGAGGCGGCGGCGGGGAGGTTCGTGGTGGAGAAGAACAGCCTGCGGGTGAC GTCGCCGGAGGGGATCAAGGGGAAGTACGAGTGCGCCATCGGGAACTTCGGGGTGCCGCA GTACGGGGGGACCTTGCATGGATGGGTCGAGTACCCCAAATCCAACCAGAAGGCTTGCAA GAGCTTCGAGGACTTCGACATCTCATTCAAGTCAACCCGGTCCGGAGGACGCCCGAAGTT CGTGCTCATCGACCGTGGACAGTGCTATTTCACAACGAAGGCATGGAATGCACAAAATGC TGGGGCTGCAGCAGTTCTTGTTGTGGATGACAAGTCGGAGCCTTTAATCACAATGGATAA CCCAGATGATGCTGGAACAGAGCACCTTGAAAACATCACTATTCCCTCTGTGCTTATAAC GAAGAAATTGGGCGATGACCTAAAAAAATCTGCTGAAAATGGTGATATGGTTAGCGTCCT TCTGGACTGGAGAGAATCTCTTCCACATCCTGATGAGCGTGTAGAGTATGAATTCTGGAC AAACAGTAACGATGAATGTGGTCCGAAATGTGATATGCAAATGGACTTTGTTAAGAGCTT TAGAGGAACTGCACAAATTCTTGAGAAGAAGGGATACACCCAGTTCACTCCTCATTATAT TACATGGTATTGCCCTGAAGCTTTTGTTGTGAGCAAGCAGTGCAAATCACAGTGTATCAA TCATGGGAGGTATTGTGCACCAGACCCAGAGCAGGATTTCAGCCAGGGATATGATGGAAA AGATGTTGTGGTTCAAAATCTACATCAAATTTGTGTATTCAAGGCTGCTAATGAGAGTGG GAAGCCATGGTTGTGGTGGGACTATGTGCATGACTTCTCAATTAGGTGCCCTATGAAGGA GAAGAAATACACACCTGAATGTGCTGTTCATGTTATTAAGTCACTCGGGTTGGATGTTGA GAAGATAAAGAAGTGTGTTGGAGATCCTGAAGCTGATGAGGAAAACCCTGTTCTGAAGGC AGAACAAGATGCCCAAATTGGTCATGATAAACGAGGAGATGTCACAATACTGCCAACCCT TGTCATCAACAACAGGCAATATCGAGGTAAGTTGGACAAATCTGCCGTGCTCAAAGCAGT CTGCGCAGGATTTGAGGAGACAACTGAGCCTGCTATTTGTTTGAGCGAGGATGTTCAAAC AAATGAGTGTTTGGAAAATAACGGAGGTTGCTGGCAAGATAGGGATAATAATGTTACTGC ATGCAAGGATACCTTCCGTGGGCGTGTTTGTGAATGTCCCGTTGTGAAAGGTGTAAAGTT TGTTGGTGATGGGTACACCAATTGTGAAGCTTCTGGCATTGGTAGGTGCGAAATTAAAAA TGGAGGATGCTGGAAAGAAACTAGAAATGGCAAGACAATATCTGCCTGCTCAAATGAAGT ATCTGAAGGCTGCAAATGTCCACCAGGTTTCAAGGGTGATGGAATAAAAAGTTGTGAAGA TATTGATGAATGCAAGGAAAAACTTTACTGTCAATGCAAGGGCTGCAGCTGTGAGAATAC ATGGGGTAGCTATGAGTGCAGTTGTGGCGGTAACAACATGTTATACATGAGAGAGCATGA CACTTGTCTCAGCAAGGAGGCTACGTCAGCTGTTGGCTGGAGTTTTCTGTGGGTTATTTT CTTTGGACTTGTTCTTGCTGGGGTCGGAGCATATGCGGTGTATAAATACAGGCTACGGAG CTACATGGATTCGGAGATTCGCGCGATCATGGCCCAGTACATGCCTTTGGATAACCAAGA AGCAGCTAACCAACATCATGTCGCGCATGCTGGTGATGATATTTGAAACGGCACTCCTTT CCCGGGTGCGCGAACATTTCATATGTGTACTGATGCACCGGTGGCCATCGACTTTACAGG GGTCAACTGGGCGCAAAAGATAGTGTGTGTGCGCGAGAAAGATTAGCCGTATACATGTAT GATTGTAAGAGAGACATCGTTTGAGATCATCTTTCTGTAAAACCCAAAGAACAGCATAGG CAAATATTGTGACAGTTTTAGCCCTTCCTCAGACTCAGCTGCTCCTGCTGCATACATGAG TACTGAATACATGATACATTCAAATGTCGTGTAAATACCTGTCTGTTCTTCAGACTAGAG AATTCCTCCTCGCCTCAACTTAATAAAAGCTCGAGTCTTGAAGGGGTC