Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0333100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:12297078:12307633:1 gene:Os03g0333100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF663 domain containing protein. (Os03t0333100-01);Hypothetical conserved gene. (Os03t0333100-02)
Sequence	ATGGCCCCCGCGGACGGCGGGGGAGAGCAGCCGCACAAGGCGCACCGGCAGCACAAGTCC GGCGCGAAGGCGAGGAAGAAGAAGGGGAAGGGGAAGGGCGGCGGCGGCGACGATGACGGT GGCGAGAGGAAGAACCCGAAGGCTTTTGCCTTTCAGTCAGCTGCAAAGGCCAAGCGTCTA CAAGCACGATCGGCTGAGATTGAACAACGTCGTCTTCATGTGCCAATTATGGATCGCTCA ATTGGTGAACCACCACCTTTTGTTGTTGTAGTTCAAGGGCCTCCTCAGGTTGGGAAGTCG CTGCTGATAAAATGTCTAGTAAAGCACTACACGAAACAAAATTTGTCTGAAGTCCGTGGT CCAATCACTGTTGTGTCAGGTAAAAGCAGGCGCGTACAGTTCTTGGAGTGTCCAAATGAT ATCAACGGAATGATTGATGCTGCTAAAATAGCTGATCTTGCTCTGCTGCTTATTGATGGA AGCTATGGATTTGAAATGGATACATTTGAGTTCCTAAATATTATGCAAGTGCACGGATTC CCCAAGGTGATGGGAGTCCTTACACATCTTGATAAGTTTAAAGATGTAAAAAAGCTTAGG AAAACCAAGCAGCGCCTGAAGCATCGATTTTGGGCTGAGATAAAGGAGGGAGCAAAACTT TTCTACTTGTCTGGTCTCATTCATGGAAAGTACACGAAAAGAGAAGTCCATAATCTTGCA AGGTTCATCTCTGTTATCAAGCCTATCCCACTGAGTTGGAGGATGGCACATCCTTATCTG CTAGTCGATAGATTTGAAGATGTAACTCCTCCAGAAAGTGTGCGCTTGAACAGAAAGTGT GACAGGAAAATAACATTGTATGGCTACCTTCGTGGCTGTAACATGAAAAGAGGGACAAAG GTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGGCAGATCCT TGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGCTGTTCTAC GCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATATAAACATC AATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAAAGCAAGGG AAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGATATTCCCTT AATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTGCTCAGTCC GAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAGAAGCAGAT GGTAATAACATATGCAACGCAAACACATTGGAGAGCAATGATCATTCTTATTCTGAGTGC TCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATGAAGTTGGC TTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTATCAGCTAAT TTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTGAAAATTCT GGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTGATTCAGAT GATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACACTGTCCAGA CGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGGATGAAGGA AATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAGGACAAAAG AAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATTACTCCAAG TTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCATTCGTGAC CGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAAATGAAAAC GATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTGAGGTGCAT ACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAGATGACCTT GCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATGCAGAATAT GATGGATCTGATCTCTCCGGTGAGGAAGTTGATAATGACACAAAGAAATCGAAACGAGAA GAAACTAATGGAGGGGGCTATTTCGATAAGTTAAAGGAGGAAATTGAAATTCGCAAGCAA ATGAATATTTCCGAACTCAATGATTTAGATGAAGATACCAGGGTAGAAATTGAAGGGTTT AGGACTGGTTCTTACATCAGATTAGAGGTACATGGTGTGCCGTTTGAGCTAGTTGAATAT TTTGATCCTTGCCATCCCATTCTCGTTGGAGGCATTGGCCTTGGTGAGGAGAATACTGGA TATATGCAGGCTAGCCTGAAACGACACAGGTGGCACAGGAAAGTACTGAAGACAAAAGAC CCAATTATTGTCTCTATTGGTTGGAGGCGTTTCCAAACAACTCCTGTATATGCAATAGAG GATCGAAATGGTCGGCACCGCATGCTCAAATATACACCTGAGCATATGCATTGCTTTGCT ATGTTTTGGGGACCGCTTGCTCCACCAAAAAGTGGTGTACTGGCAGTCCAGCATCTCTCC AACAGTCAGGTACCATTTAGAATTACTGCAACAGGCTTTGTTCAAGAATTCAACAATACT GCCCGAATCATGAAGAAAATCAAGCTCACAGGTGTACCGTGCAAGATATTTAAGAAAACT GCCCTAGTCAAAGGCATGTTCACATCTGACTTAGAGGTTGCTAGGTTTGAGGGTGCAACT ATTCGGACAGTAAGTGGAATCCGAGGGCAAGTTAAAAAGGCAGCAAAGATTGAACCAGGA GATATGCCAAGGAGAAAAGGGGAAAGTATAGACGGGATTGCAAGGTGCACATTTGAAGAC AGAATTCTTATGAGTGACATTGTCTTCATGCGTGCATGGGTCAATGTTGAAGTTCCCACC TACTGTAACCTTGTGACAACTGCTCTTCAACCCCAAGATGAGACTTGGCAAGGCATGAGA ACTACTGCTGAGCTGCGGAGGGCACATAATATTCCTATACCGCACAACACAGATTCAGTT TATAAGCCCATTGAGCGGAAAGTGCGGAAGTTTAATCCTATAGAGATCCCTGCAAAACTG CAGCATCTACTTCCTTTTAAATCTAAACCGAAGGATACGCCCAAGCATAGAAAAACACCA GTGGAGAACAGGGTCCCTGTCCTTATGCAGCCCAGTGAGAAGAAGACACATGCAGCCATT CAACAGTTAAGGCTGCTAAAACATGAGAAGGCAAGGAAGAAGAAATTGCAGGATGAGAAG AAGAAGAAAGCATATGAGGCGGAGAAAGCAAAGTCTGAACTTCTAACGAAGAAGCGGCAG AGAGAGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGCAAAAGAAGCGAGCCCGCAGA TAA

Peptide Sequence

PEP ID	Os03t0333100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:12297078:12307633:1 gene:Os03g0333100 transcript:Os03t0333100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF663 domain containing protein. (Os03t0333100-01);Hypothetical conserved gene. (Os03t0333100-02)
Sequence	MAPADGGGEQPHKAHRQHKSGAKARKKKGKGKGGGGDDDGGERKNPKAFAFQSAAKAKRL QARSAEIEQRRLHVPIMDRSIGEPPPFVVVVQGPPQVGKSLLIKCLVKHYTKQNLSEVRG PITVVSGKSRRVQFLECPNDINGMIDAAKIADLALLLIDGSYGFEMDTFEFLNIMQVHGF PKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWAEIKEGAKLFYLSGLIHGKYTKREVHNLA RFISVIKPIPLSWRMAHPYLLVDRFEDVTPPESVRLNRKCDRKITLYGYLRGCNMKRGTK VHITGAGDFSLSGVTSLADPCPLPSAAKKRGLRDKEKLFYAPMSGLGDLLYDTDAVYINI NPHLVQFSKTGENDASKKQGKGQDVGVTLVKTLQNPRYSLNEKLDQSFINLFGRKPAAQS EDISGNQNDQGDANILEEADGNNICNANTLESNDHSYSECSSDSEHDNDEATQQNDHEVG LREEVEFCNGRMRRKAVSANFKDDDDDEGAEEDDVDSENSGDDQLSEGSADDSEESLDSD DETENNSKWKESLLARTLSRRSANLMQLVYGQASKKLDEGNDSSAEESSDEEFFVPKGQK KQAKNESTSFDDMDAEDYSKFFKTELRDWSDEDLIKSIRDRFVTGNWSKAALRGQEINEN DVDDEEVDGDFEDLETGEVHTSKAYENTSGNGGTHKQDDLAMEERRLKKLALKAKFDAEY DGSDLSGEEVDNDTKKSKREETNGGGYFDKLKEEIEIRKQMNISELNDLDEDTRVEIEGF RTGSYIRLEVHGVPFELVEYFDPCHPILVGGIGLGEENTGYMQASLKRHRWHRKVLKTKD PIIVSIGWRRFQTTPVYAIEDRNGRHRMLKYTPEHMHCFAMFWGPLAPPKSGVLAVQHLS NSQVPFRITATGFVQEFNNTARIMKKIKLTGVPCKIFKKTALVKGMFTSDLEVARFEGAT IRTVSGIRGQVKKAAKIEPGDMPRRKGESIDGIARCTFEDRILMSDIVFMRAWVNVEVPT YCNLVTTALQPQDETWQGMRTTAELRRAHNIPIPHNTDSVYKPIERKVRKFNPIEIPAKL QHLLPFKSKPKDTPKHRKTPVENRVPVLMQPSEKKTHAAIQQLRLLKHEKARKKKLQDEK KKKAYEAEKAKSELLTKKRQREERRVRYREEDKQKKRARR

Transcript Sequence

Transcript ID	Os03t0333100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12297078:12307633:1 gene:Os03g0333100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF663 domain containing protein. (Os03t0333100-01);Hypothetical conserved gene. (Os03t0333100-02)
Sequence	AGCTTTCTCCACCGCCGCTCTCTTCGCCGCAGCGGCGCCGCGCGCAAACGCCCTCCGCCG CTAACCCTAGCGCTCCATGGCCCCCGCGGACGGCGGGGGAGAGCAGCCGCACAAGGCGCA CCGGCAGCACAAGTCCGGCGCGAAGGCGAGGAAGAAGAAGGGGAAGGGGAAGGGCGGCGG CGGCGACGATGACGGTGGCGAGAGGAAGAACCCGAAGGCTTTTGCCTTTCAGTCAGCTGC AAAGGCCAAGCGTCTACAAGCACGATCGGCTGAGATTGAACAACGTCGTCTTCATGTGCC AATTATGGATCGCTCAATTGGTGAACCACCACCTTTTGTTGTTGTAGTTCAAGGGCCTCC TCAGGTTGGGAAGTCGCTGCTGATAAAATGTCTAGTAAAGCACTACACGAAACAAAATTT GTCTGAAGTCCGTGGTCCAATCACTGTTGTGTCAGGTAAAAGCAGGCGCGTACAGTTCTT GGAGTGTCCAAATGATATCAACGGAATGATTGATGCTGCTAAAATAGCTGATCTTGCTCT GCTGCTTATTGATGGAAGCTATGGATTTGAAATGGATACATTTGAGTTCCTAAATATTAT GCAAGTGCACGGATTCCCCAAGGTGATGGGAGTCCTTACACATCTTGATAAGTTTAAAGA TGTAAAAAAGCTTAGGAAAACCAAGCAGCGCCTGAAGCATCGATTTTGGGCTGAGATAAA GGAGGGAGCAAAACTTTTCTACTTGTCTGGTCTCATTCATGGAAAGTACACGAAAAGAGA AGTCCATAATCTTGCAAGGTTCATCTCTGTTATCAAGCCTATCCCACTGAGTTGGAGGAT GGCACATCCTTATCTGCTAGTCGATAGATTTGAAGATGTAACTCCTCCAGAAAGTGTGCG CTTGAACAGAAAGTGTGACAGGAAAATAACATTGTATGGCTACCTTCGTGGCTGTAACAT GAAAAGAGGGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAAC AAGTTTGGCAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAA GGAAAAGCTGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGC AGTTTATATAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGC ATCTAAAAAGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAA CCCCAGATATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAA GCCTGCTGCTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATAT TTTGGAAGAAGCAGATGGTAATAACATATGCAACGCAAACACATTGGAGAGCAATGATCA TTCTTATTCTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAA TGACCATGAAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAA AGCTGTATCAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGT TGACAGTGAAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGA ATCACTTGATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGC TAGAACACTGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAA GAAGCTGGATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGT ACCAAAAGGACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGC TGAGGATTACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCAT CAAGAGCATTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACA GGAAATAAATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGA GACTGGTGAGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCA CAAGCAAGATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAA ATTTGATGCAGAATATGATGGATCTGATCTCTCCGGTGAGGAAGTTGATAATGACACAAA GAAATCGAAACGAGAAGAAACTAATGGAGGGGGCTATTTCGATAAGTTAAAGGAGGAAAT TGAAATTCGCAAGCAAATGAATATTTCCGAACTCAATGATTTAGATGAAGATACCAGGGT AGAAATTGAAGGGTTTAGGACTGGTTCTTACATCAGATTAGAGGTACATGGTGTGCCGTT TGAGCTAGTTGAATATTTTGATCCTTGCCATCCCATTCTCGTTGGAGGCATTGGCCTTGG TGAGGAGAATACTGGATATATGCAGGCTAGCCTGAAACGACACAGGTGGCACAGGAAAGT ACTGAAGACAAAAGACCCAATTATTGTCTCTATTGGTTGGAGGCGTTTCCAAACAACTCC TGTATATGCAATAGAGGATCGAAATGGTCGGCACCGCATGCTCAAATATACACCTGAGCA TATGCATTGCTTTGCTATGTTTTGGGGACCGCTTGCTCCACCAAAAAGTGGTGTACTGGC AGTCCAGCATCTCTCCAACAGTCAGGTACCATTTAGAATTACTGCAACAGGCTTTGTTCA AGAATTCAACAATACTGCCCGAATCATGAAGAAAATCAAGCTCACAGGTGTACCGTGCAA GATATTTAAGAAAACTGCCCTAGTCAAAGGCATGTTCACATCTGACTTAGAGGTTGCTAG GTTTGAGGGTGCAACTATTCGGACAGTAAGTGGAATCCGAGGGCAAGTTAAAAAGGCAGC AAAGATTGAACCAGGAGATATGCCAAGGAGAAAAGGGGAAAGTATAGACGGGATTGCAAG GTGCACATTTGAAGACAGAATTCTTATGAGTGACATTGTCTTCATGCGTGCATGGGTCAA TGTTGAAGTTCCCACCTACTGTAACCTTGTGACAACTGCTCTTCAACCCCAAGATGAGAC TTGGCAAGGCATGAGAACTACTGCTGAGCTGCGGAGGGCACATAATATTCCTATACCGCA CAACACAGATTCAGTTTATAAGCCCATTGAGCGGAAAGTGCGGAAGTTTAATCCTATAGA GATCCCTGCAAAACTGCAGCATCTACTTCCTTTTAAATCTAAACCGAAGGATACGCCCAA GCATAGAAAAACACCAGTGGAGAACAGGGTCCCTGTCCTTATGCAGCCCAGTGAGAAGAA GACACATGCAGCCATTCAACAGTTAAGGCTGCTAAAACATGAGAAGGCAAGGAAGAAGAA ATTGCAGGATGAGAAGAAGAAGAAAGCATATGAGGCGGAGAAAGCAAAGTCTGAACTTCT AACGAAGAAGCGGCAGAGAGAGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGCAAAA GAAGCGAGCCCGCAGATAACTGAAAATAGTAAGAGACCTGCAGGCATAATGAGTCCCAGA AATCTCCTGAGGCACATCATCCAGAGCATATGGTTGCTTCAAACTAGCTCAAGTTGCCGC CTCCAGAAAAAAGAGGCTCGGATTGACAGCAGACGAGGTCTGATGCCTCGGCATATCAAG CTGGAGATGCAGAACAACTTGGTATAATCTGGGCCGGATTCAACTAGTAGCGTCTTTTTT ATGTAGCTAACCAGTTTTGCTCCACCATGCTGCTACGAAAATTTTGTCATCCATGTAACT GATGATTTGTAGCTCCCAGGTGAAGTGGGAGTGAATATGTTAAATTATCAATCTTAGGAC ATAACAGTTGCCCATTTTCAGGCCTATTATAATTCTAGAGCTAGGGGACACTGAGTTGTC AGCATTGGATTTATTGGTACTACTGTATGACAAGGACGTGATTTTGATAAATTTGGTTCC CGTTCTGCTCGC