Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0330200-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:12145860:12150208:1 gene:Os03g0330200 gene_biotype:protein_coding transcript_biotype:protein_coding description:2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I). (Os03t0330200-00)
Sequence

ATGGCGGAGACGAGGCGGTGGGAGCTGGCGGCTCACCGGAGGCTGGAGAAGGGGAAGGTG
GTGGGCGTGGTGGTGCTGGACGGCTGGGGCGAGGCGGCGCCGGATACCTTCAACTGCATC
CACGTCGCCGACACCCCAACCCTCGACGCCCTCAAGAAGGGTGGTCCGGAGAGGTGGAGG
GTGATCAAGGCTCACGGGACGGCGGTGGGGCTGCCTACGGACGACGACATGGGCAACAGT
GAGGTTGGCCACAACGCGCTTGGAGCAGGCCAGATATATGCCCAGGGTGCAAAACTGGTA
GATATGGCGCTAGCCTCTGGAAAGATATACGAGGGGGAAGGTTTTAAGTACATCCAACAG
TCCTTCGAGAACGGTACTTTGCACCTCATTGGCTTGCTCAGCGATGGAGGAGTACATTCA
AGGATTGATCAGCTGCAGCTGCTTCTAAAAGGAGCCAGTGAGCATGGAGCGAAAAGGATA
CGGGTTCATATACTTACAGATGGCCGTGATGTGTTGGACGGTAGCAGTGTCAAGTTTGTG
GAATTGATTGAGAATGACCTTGCTAAATTACGGGATAAGGGTGTGGATGCAAGAATTGCA
TCTGGTGGTGGCAGGATGTATGTCACGATGGACCGTTATGAGAATGACTGGCAAGTTGTG
AAGCGTGGTTGGGATGCACAGGTTCTCGGTGAAGCGCCACATAAGTTTCAAAACGCCCTT
GAAGCTGTGAAGAAGCTCAGGGAGGATCCAAAGGCCAATGACCAGTATTTACCGCCATTT
GTTATAGTTGACGAAAGAGGAAGACCGATTGGCCCTATAATGGATGGGGATGCTGTTGTG
ACATTTAATTTCAGAGCAGACCGGATGGTCATGCTTGCAAAGGCACTAGAATACGAGAGT
TTTGACAAATTTGATCGTGTCAGGTTCCCCAAGATTCGCTATGCCGGTATGCTTCAGTAC
GACGGTGAGCTAAAACTTCCGAGCCATTTTCTTGTTGCTCCCCCAGAGATAGAGAGAACG
TCTGGCGAATACTTAGCGCGCAATGGCATACGCACATATGCTTGCAGTGAGACAGTCAAA
TTTGGTCACGTCACTTTTTTCTGGAATGGAAACCGGTCTGGCTACTTCCACCCAAACCTG
GAAAAATACGAAGAAATTCCAAGTGACATTGGTATCCCCTTCAATGAACAGCCAAAAATG
AAGGCCGTGGAAATTGCGAAGAAGACAAGGGATGCCATCCTGAGTCGCAAATTTGATCAG
GTAAGGGTAAACATCGCAAATGGAGATATGGTTGGTCACACAGGCGACATTGAAGCTACT
ATCGTTGGGTGCAAGGCAGCTGATGAAGCTGTTAAGATTGTTCTCGATGCGATAGAACAA
GTAGGTGGCATTTTCGTGGTCACCGCAGACCATGGCAATGCGGAGGACATGGTGAAAAGA
GATAAATCTGGCAAACCGCTTCGCGACAAGGATGGAAATGTCCAGCCCCTCACCTCACAC
ACTTTGAATCCAGTTCCCATCGCCATTGGAGGCCCTGGGCTTCAACCAGGGGTAAGATTT
CGGTCAGATCTCCCCAGTGCCGGCCTTGCCAACGTTGCGGCAACAGTCATGAATCTTCAT
GGCTTCGAGGCCCCAGATCACTATGAGCCTACGCTGATCGAAGTTGTCGACAAATGA

Peptide Sequence

PEP ID

Os03t0330200-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:12145860:12150208:1 gene:Os03g0330200 transcript:Os03t0330200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I). (Os03t0330200-00)
Sequence

MAETRRWELAAHRRLEKGKVVGVVVLDGWGEAAPDTFNCIHVADTPTLDALKKGGPERWR
VIKAHGTAVGLPTDDDMGNSEVGHNALGAGQIYAQGAKLVDMALASGKIYEGEGFKYIQQ
SFENGTLHLIGLLSDGGVHSRIDQLQLLLKGASEHGAKRIRVHILTDGRDVLDGSSVKFV
ELIENDLAKLRDKGVDARIASGGGRMYVTMDRYENDWQVVKRGWDAQVLGEAPHKFQNAL
EAVKKLREDPKANDQYLPPFVIVDERGRPIGPIMDGDAVVTFNFRADRMVMLAKALEYES
FDKFDRVRFPKIRYAGMLQYDGELKLPSHFLVAPPEIERTSGEYLARNGIRTYACSETVK
FGHVTFFWNGNRSGYFHPNLEKYEEIPSDIGIPFNEQPKMKAVEIAKKTRDAILSRKFDQ
VRVNIANGDMVGHTGDIEATIVGCKAADEAVKIVLDAIEQVGGIFVVTADHGNAEDMVKR
DKSGKPLRDKDGNVQPLTSHTLNPVPIAIGGPGLQPGVRFRSDLPSAGLANVAATVMNLH
GFEAPDHYEPTLIEVVDK

Transcript Sequence

Transcript ID

Os03t0330200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:12145860:12150208:1 gene:Os03g0330200 gene_biotype:protein_coding transcript_biotype:protein_coding description:2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I). (Os03t0330200-00)
Sequence

TTCTTCTCGATGGCGGAGACGAGGCGGTGGGAGCTGGCGGCTCACCGGAGGCTGGAGAAG
GGGAAGGTGGTGGGCGTGGTGGTGCTGGACGGCTGGGGCGAGGCGGCGCCGGATACCTTC
AACTGCATCCACGTCGCCGACACCCCAACCCTCGACGCCCTCAAGAAGGGTGGTCCGGAG
AGGTGGAGGGTGATCAAGGCTCACGGGACGGCGGTGGGGCTGCCTACGGACGACGACATG
GGCAACAGTGAGGTTGGCCACAACGCGCTTGGAGCAGGCCAGATATATGCCCAGGGTGCA
AAACTGGTAGATATGGCGCTAGCCTCTGGAAAGATATACGAGGGGGAAGGTTTTAAGTAC
ATCCAACAGTCCTTCGAGAACGGTACTTTGCACCTCATTGGCTTGCTCAGCGATGGAGGA
GTACATTCAAGGATTGATCAGCTGCAGCTGCTTCTAAAAGGAGCCAGTGAGCATGGAGCG
AAAAGGATACGGGTTCATATACTTACAGATGGCCGTGATGTGTTGGACGGTAGCAGTGTC
AAGTTTGTGGAATTGATTGAGAATGACCTTGCTAAATTACGGGATAAGGGTGTGGATGCA
AGAATTGCATCTGGTGGTGGCAGGATGTATGTCACGATGGACCGTTATGAGAATGACTGG
CAAGTTGTGAAGCGTGGTTGGGATGCACAGGTTCTCGGTGAAGCGCCACATAAGTTTCAA
AACGCCCTTGAAGCTGTGAAGAAGCTCAGGGAGGATCCAAAGGCCAATGACCAGTATTTA
CCGCCATTTGTTATAGTTGACGAAAGAGGAAGACCGATTGGCCCTATAATGGATGGGGAT
GCTGTTGTGACATTTAATTTCAGAGCAGACCGGATGGTCATGCTTGCAAAGGCACTAGAA
TACGAGAGTTTTGACAAATTTGATCGTGTCAGGTTCCCCAAGATTCGCTATGCCGGTATG
CTTCAGTACGACGGTGAGCTAAAACTTCCGAGCCATTTTCTTGTTGCTCCCCCAGAGATA
GAGAGAACGTCTGGCGAATACTTAGCGCGCAATGGCATACGCACATATGCTTGCAGTGAG
ACAGTCAAATTTGGTCACGTCACTTTTTTCTGGAATGGAAACCGGTCTGGCTACTTCCAC
CCAAACCTGGAAAAATACGAAGAAATTCCAAGTGACATTGGTATCCCCTTCAATGAACAG
CCAAAAATGAAGGCCGTGGAAATTGCGAAGAAGACAAGGGATGCCATCCTGAGTCGCAAA
TTTGATCAGGTAAGGGTAAACATCGCAAATGGAGATATGGTTGGTCACACAGGCGACATT
GAAGCTACTATCGTTGGGTGCAAGGCAGCTGATGAAGCTGTTAAGATTGTTCTCGATGCG
ATAGAACAAGTAGGTGGCATTTTCGTGGTCACCGCAGACCATGGCAATGCGGAGGACATG
GTGAAAAGAGATAAATCTGGCAAACCGCTTCGCGACAAGGATGGAAATGTCCAGCCCCTC
ACCTCACACACTTTGAATCCAGTTCCCATCGCCATTGGAGGCCCTGGGCTTCAACCAGGG
GTAAGATTTCGGTCAGATCTCCCCAGTGCCGGCCTTGCCAACGTTGCGGCAACAGTCATG
AATCTTCATGGCTTCGAGGCCCCAGATCACTATGAGCCTACGCTGATCGAAGTTGTCGAC
AAATGATGACT