Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0329500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:12104108:12108324:-1 gene:Os03g0329500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULASE 9D description:Similar to Endo-1,4-beta-glucanase (EC 3.2.1.4). (Os03t0329500-01)
Sequence	ATGAGCATGTACGGGAGGGACCCGTGGGGCGGGCCGCTGGAGATATGCCACGACTCGGCG ACGGACGACGACCGGAGCCGGAACCTGGACCTGGACAGGGGGGCGCTGTCGCGGACGCTG GACGAGACGCAGCAGAGCTGGCTGCTGGCCGGGCCGGGGGACCAGGGCCGGAAGAAGAAG AAGTACGTCGACCTCGGCTGCCTCGTCGTCAGCCGCAAGCTCTTCGTGTGGACGGTCGGG GTGCTCCTCGCCGCCGCCGTCTTCGCCGGGCTCGTCGCCGGCATCGCCAAGGCCATCCCC AGGCACCACCGCCCGCCGCCGCCGCCGGACGACTTCACCGTCGCGCTGCGCAAGGCGCTC ATGTTCTTCAATGCCCAGAAATCTGGAAAGCTTCCGAAGAACAACAATGTGCATTGGCGT GGTAACTCGTGCATGAAGGACGGACTCTCGGATCCGGCAGTCGGGCGCAGCCTCGTCGGA GGGTACTACGACGCCGGCGACGCCGTCAAGTTCAACTTTCCAGCTGCCTTCTCCATGACC CTCCTCAGCTGGAGCGTCATCGAGTACAGTGCTAAATACGAGGCAGTTGGGGAACTTGGC CATATCCGTGATACCATCAAGTGGGGGGCCGATTACTTCTTGAAGACCTTCAACTCAACG GCGGATACCATTGATCGTGTCGTTATGCAGGTGGGGAGCGGTGCAACATCACCCGGTTCG ACTCAACCGAACGATCACTATTGTTGGATGAGACCAGAGGACATTGACTACCCTCGCCCA GTAGTTGAGTGCCATGCTTGTTCAGATCTTGCGGCTGAGATGGCTGCATCATTGGCAGCA GCATCAATTGTGTTCAAGGACAATAAGGCGTACTCGCAGAAGCTGGTACATGGTGCTACC ACCCTCTTCAAGTTTGCAAGGCAAAACCGTGGAAGATATAGTGCAGGTGGTTCCGATGCT GCAAAATTCTATAACTCAACCAGCTACTGGGATGAGTTTGTATGGGGTGGTTCATGGATG TATCTCGCAACCGGCAATTCATCGTACCTGCAGTTGGCAACACACCCCAAGCTTGCAAAG CATGCTGGTGCTTACTGGGGTGGTCCAGACTACGGTGTATTCAGCTGGGACAATAAGCTT ACTGGTGCACAGGTTCTTTTGAGCCGGTTAAGGCTCTTCTTAAGTCCTGGTTATCCATAT GAAGAGATCCTCAGGACATTCCACAATCAAACAAGCATTATTATGTGCTCTTATCTTCCA ATTTTCAAGTCTTTCAACAGGACAAAAGGTGGTTTGATCCAGTTGAATCACGGGAGGCCA CAACCTCTTCAGTATGTGGTGAACGCTGCATTCCTTGCTTCTTTGTACGGTGACTATCTT GAGGCTGCAGATACCCCTGGCTGGTATTGTGGGCCCCATTTCTACCCAATTGAAACTCTG CGCAATTTTGCAAGAACTCAAATCGAATACATCTTAGGAAAAAATCCTTTGAAGATGAGC TATGTGGTTGGTTACGGAAACCGTTACCCTAAACGTGTTCATCATCGGGGTGCCTCGATC CCAAAGAATGGTGTCCACTACGGTTGCAAAGGAGGTTGGAAGTGGAGAGAAACCAAGAAA CCAAACCCTAACATCATCGTCGGAGCGATGGTAGCTGGCCCTGATCGCCACGACGGCTTC AAGGATGTTCGCAAGAATTACAACTACACGGAAGCAACTCTAGCTGGCAATGCCGGTCTA GTTGCAGCATTAGTAGCATTGTCAGGTGAAGGCCATGGCGTGGATAAGAACACTATGTTT TCTGCCGTGCCGCCGATGTTCCCTTCGCCCCCACCGCCTCCGGCACCATGGAAACCATGA

Peptide Sequence

PEP ID	Os03t0329500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:12104108:12108324:-1 gene:Os03g0329500 transcript:Os03t0329500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULASE 9D description:Similar to Endo-1,4-beta-glucanase (EC 3.2.1.4). (Os03t0329500-01)
Sequence	MSMYGRDPWGGPLEICHDSATDDDRSRNLDLDRGALSRTLDETQQSWLLAGPGDQGRKKK KYVDLGCLVVSRKLFVWTVGVLLAAAVFAGLVAGIAKAIPRHHRPPPPPDDFTVALRKAL MFFNAQKSGKLPKNNNVHWRGNSCMKDGLSDPAVGRSLVGGYYDAGDAVKFNFPAAFSMT LLSWSVIEYSAKYEAVGELGHIRDTIKWGADYFLKTFNSTADTIDRVVMQVGSGATSPGS TQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAT TLFKFARQNRGRYSAGGSDAAKFYNSTSYWDEFVWGGSWMYLATGNSSYLQLATHPKLAK HAGAYWGGPDYGVFSWDNKLTGAQVLLSRLRLFLSPGYPYEEILRTFHNQTSIIMCSYLP IFKSFNRTKGGLIQLNHGRPQPLQYVVNAAFLASLYGDYLEAADTPGWYCGPHFYPIETL RNFARTQIEYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKK PNPNIIVGAMVAGPDRHDGFKDVRKNYNYTEATLAGNAGLVAALVALSGEGHGVDKNTMF SAVPPMFPSPPPPPAPWKP

Transcript Sequence

Transcript ID	Os03t0329500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12104108:12108324:-1 gene:Os03g0329500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULASE 9D description:Similar to Endo-1,4-beta-glucanase (EC 3.2.1.4). (Os03t0329500-01)
Sequence	AGTCCTCCTCACTGTCCGTCCCAAGAACCACTCGGTGCAGCCGCCGCCGCCGCCGCAGCC AGTGCCATTGCAAGAATCGCGAGGGGGTATTGAGGTTGGGCGGCGAGATGAGCATGTACG GGAGGGACCCGTGGGGCGGGCCGCTGGAGATATGCCACGACTCGGCGACGGACGACGACC GGAGCCGGAACCTGGACCTGGACAGGGGGGCGCTGTCGCGGACGCTGGACGAGACGCAGC AGAGCTGGCTGCTGGCCGGGCCGGGGGACCAGGGCCGGAAGAAGAAGAAGTACGTCGACC TCGGCTGCCTCGTCGTCAGCCGCAAGCTCTTCGTGTGGACGGTCGGGGTGCTCCTCGCCG CCGCCGTCTTCGCCGGGCTCGTCGCCGGCATCGCCAAGGCCATCCCCAGGCACCACCGCC CGCCGCCGCCGCCGGACGACTTCACCGTCGCGCTGCGCAAGGCGCTCATGTTCTTCAATG CCCAGAAATCTGGAAAGCTTCCGAAGAACAACAATGTGCATTGGCGTGGTAACTCGTGCA TGAAGGACGGACTCTCGGATCCGGCAGTCGGGCGCAGCCTCGTCGGAGGGTACTACGACG CCGGCGACGCCGTCAAGTTCAACTTTCCAGCTGCCTTCTCCATGACCCTCCTCAGCTGGA GCGTCATCGAGTACAGTGCTAAATACGAGGCAGTTGGGGAACTTGGCCATATCCGTGATA CCATCAAGTGGGGGGCCGATTACTTCTTGAAGACCTTCAACTCAACGGCGGATACCATTG ATCGTGTCGTTATGCAGGTGGGGAGCGGTGCAACATCACCCGGTTCGACTCAACCGAACG ATCACTATTGTTGGATGAGACCAGAGGACATTGACTACCCTCGCCCAGTAGTTGAGTGCC ATGCTTGTTCAGATCTTGCGGCTGAGATGGCTGCATCATTGGCAGCAGCATCAATTGTGT TCAAGGACAATAAGGCGTACTCGCAGAAGCTGGTACATGGTGCTACCACCCTCTTCAAGT TTGCAAGGCAAAACCGTGGAAGATATAGTGCAGGTGGTTCCGATGCTGCAAAATTCTATA ACTCAACCAGCTACTGGGATGAGTTTGTATGGGGTGGTTCATGGATGTATCTCGCAACCG GCAATTCATCGTACCTGCAGTTGGCAACACACCCCAAGCTTGCAAAGCATGCTGGTGCTT ACTGGGGTGGTCCAGACTACGGTGTATTCAGCTGGGACAATAAGCTTACTGGTGCACAGG TTCTTTTGAGCCGGTTAAGGCTCTTCTTAAGTCCTGGTTATCCATATGAAGAGATCCTCA GGACATTCCACAATCAAACAAGCATTATTATGTGCTCTTATCTTCCAATTTTCAAGTCTT TCAACAGGACAAAAGGTGGTTTGATCCAGTTGAATCACGGGAGGCCACAACCTCTTCAGT ATGTGGTGAACGCTGCATTCCTTGCTTCTTTGTACGGTGACTATCTTGAGGCTGCAGATA CCCCTGGCTGGTATTGTGGGCCCCATTTCTACCCAATTGAAACTCTGCGCAATTTTGCAA GAACTCAAATCGAATACATCTTAGGAAAAAATCCTTTGAAGATGAGCTATGTGGTTGGTT ACGGAAACCGTTACCCTAAACGTGTTCATCATCGGGGTGCCTCGATCCCAAAGAATGGTG TCCACTACGGTTGCAAAGGAGGTTGGAAGTGGAGAGAAACCAAGAAACCAAACCCTAACA TCATCGTCGGAGCGATGGTAGCTGGCCCTGATCGCCACGACGGCTTCAAGGATGTTCGCA AGAATTACAACTACACGGAAGCAACTCTAGCTGGCAATGCCGGTCTAGTTGCAGCATTAG TAGCATTGTCAGGTGAAGGCCATGGCGTGGATAAGAACACTATGTTTTCTGCCGTGCCGC CGATGTTCCCTTCGCCCCCACCGCCTCCGGCACCATGGAAACCATGATTGGCTGCCACTA TCTGATTCTGATTCATTTTGTATACGGCTTATTTAGATTAGTGTTTTTCTCCCTTGTTCT GGAAATGCTGGGGGAAACCTAACAGAAAAGAAGGCGTCAGGTTTTTATCTTTGTTTCTCC CATTGTTGTATACTTGTATAATCCCCATGTTATGTAACACTATTGCTGTTCTGGTATGAA CCTAGTAATTAATACTATCTTTCCTCGT