Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0328900-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:12047013:12050524:1 gene:Os03g0328900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 description:Similar to cDNA clone:J033099F01, full insert sequence. (Os03t0328900-01);Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0328900-02)
Sequence	ATGGACGCCTACGAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGAC CACGCCGCCAAGATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATA CGCCTCGCCTTCGGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCTCGCAAGGAG CTCGCCCTCCTCCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGCCCACCGTGCCGGCGGCC CACTCGCCGTTCCTGCTGTCGCGGCAGAACTCCGGCCGCGGCCCCGCGCCGTCGCCGTCG CCGCTGTCCGCGTCCTCGCCGTCCTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGCAAT GGGTCCGTGGATGAGGTGGTGGGCGCTGGGGAGGAGCTAATCAGCCCGGCGAACAGCGGG GGAGGCGCCGCGGCGAACGCGCCGCCCTTCTTTCCTCGGGGTGGGGACGTGCTCCTGGAC GACTTCCAGCTGCAGGAGCAGCTCGCGTTCCTCAACGAGGGGGGCGTCAACCCCAGCCAC CCTCTCCAGGGGTTCGATGGAGCGGAGTGCCGGAGCCCCGGTCCCGGCGAGGGCGGCGGG ATGTTCCCGTACGGTCTCGGCTGGGCAAACGGTGGCCCTGGGCACCGCCGGAGCGCGTCG GTCAACGAGCTCTGCCTCGGCGGCGGCAGCAGCGACGGCTTCGGGTGGAAGCCTTGCCTG TACTACGCGCGCGGGTTCTGCAAGAACGGCAGCAGCTGCAGGTTCGTCCACGGCGACGAC GCCGCCGCTCTGACGGGCGCCGCCATGGACGCGGCCACCGCCGAGCAGCAGCAGTGCCAG GATTTCCTCCTCCGTTCCAAGAGCCAGCGCCTCGGCCCTGCTGCCTTCCCCTATTCACCC ACAGGGTCGCTCCCCGGCTCGCCATCCGCCGCCACCAAGTGCCTCAGCCTCTTGCTGCAG CAGCAGCACAACGACAACCAAAGAGCCGCGGCGGCGGCGGCGCTGATGCTCGGCGGCAGC GACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGACTTTGCCAGCATG ATGAACCCCGGATCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAG GAGGACGTCTCCAACTACTTCAGCATCTACGGTCCGGTGCACGACGTGCGCATCCCGTAC CAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTGTACCCTGAGACGGTGAAGCTGATC TTGGCCAAGGGCAATCCGCATTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCTTACAAG GAGAAGGGCAAGGTCCCCGACAAGTACAGGAAACATCAAGGTGACTTCTCCGGCTGCACG ACCCCCACTGGCCTGGACGGCAGAGACCCATTCGATCTGCATCAGCTCGGTGCGAGGATG CTGCAGCACTCCAATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGCAGCAG CAGGCTGCCGAGCTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACCTCCAG CTGCTCGACCTCAAGAATAGAGCCGCAGCTGCTGTCACAACAGCAATGGCGATGACAATT CCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCG CCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTC AACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGAC CAAAGCTTGGAGCACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTC TCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGT GCATCTCATGTAGGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGG CCCTCTACTTTGGATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCT GATCACGGAGCGATTGGGATGTAA

Peptide Sequence

PEP ID	Os03t0328900-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:12047013:12050524:1 gene:Os03g0328900 transcript:Os03t0328900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 description:Similar to cDNA clone:J033099F01, full insert sequence. (Os03t0328900-01);Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0328900-02)
Sequence	MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFSRSN GSVDEVVGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNEGGVNPSH PLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGSSDGFGWKPCL YYARGFCKNGSSCRFVHGDDAAALTGAAMDAATAEQQQCQDFLLRSKSQRLGPAAFPYSP TGSLPGSPSAATKCLSLLLQQQHNDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDFASM MNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLI LAKGNPHFICDARVLVKPYKEKGKVPDKYRKHQGDFSGCTTPTGLDGRDPFDLHQLGARM LQHSNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTI PTANAFGSSQPLATTMVESPPDSGEQLKGTGYFTEERKMVNGGGDKEESAGEASLNADSD QSLEHNLPDSPFASPTKSSVSAHQSFTTTDTGVVATSSCSASHVGISAGTNAGGGINHLR PSTLDIPSPRDFFSVSRLASDHGAIGM

Transcript Sequence

Transcript ID	Os03t0328900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:12047013:12050524:1 gene:Os03g0328900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 description:Similar to cDNA clone:J033099F01, full insert sequence. (Os03t0328900-01);Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0328900-02)
Sequence	GGAAAAGGAGGGGTAAAGGTGTGTGAGGTGAAGGCGAGGGGAGAAGCGAGAAGCTCGTGA GCAGCAGCGGTGTGTGTGTGTGTGTGTGTGTGTGCGTGGGGCGAAGGGAGGGGAAGAAGA AGAAGGAGAAGGAGAACTTGTTGCTCCGGGCGTTTCTTGGGCGCGGCCATGGACGCCTAC GAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAG ATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTC GGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCTCGCAAGGAGCTCGCCCTCCTC CCGCCGCCGCCGCCGCCGTCGTCGTCGTCGCCCACCGTGCCGGCGGCCCACTCGCCGTTC CTGCTGTCGCGGCAGAACTCCGGCCGCGGCCCCGCGCCGTCGCCGTCGCCGCTGTCCGCG TCCTCGCCGTCCTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGCAATGGGTCCGTGGAT GAGGTGGTGGGCGCTGGGGAGGAGCTAATCAGCCCGGCGAACAGCGGGGGAGGCGCCGCG GCGAACGCGCCGCCCTTCTTTCCTCGGGGTGGGGACGTGCTCCTGGACGACTTCCAGCTG CAGGAGCAGCTCGCGTTCCTCAACGAGGGGGGCGTCAACCCCAGCCACCCTCTCCAGGGG TTCGATGGAGCGGAGTGCCGGAGCCCCGGTCCCGGCGAGGGCGGCGGGATGTTCCCGTAC GGTCTCGGCTGGGCAAACGGTGGCCCTGGGCACCGCCGGAGCGCGTCGGTCAACGAGCTC TGCCTCGGCGGCGGCAGCAGCGACGGCTTCGGGTGGAAGCCTTGCCTGTACTACGCGCGC GGGTTCTGCAAGAACGGCAGCAGCTGCAGGTTCGTCCACGGCGACGACGCCGCCGCTCTG ACGGGCGCCGCCATGGACGCGGCCACCGCCGAGCAGCAGCAGTGCCAGGATTTCCTCCTC CGTTCCAAGAGCCAGCGCCTCGGCCCTGCTGCCTTCCCCTATTCACCCACAGGGTCGCTC CCCGGCTCGCCATCCGCCGCCACCAAGTGCCTCAGCCTCTTGCTGCAGCAGCAGCACAAC GACAACCAAAGAGCCGCGGCGGCGGCGGCGCTGATGCTCGGCGGCAGCGACGAGGCGCAC AAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGACTTTGCCAGCATGATGAACCCCGGA TCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCC AACTACTTCAGCATCTACGGTCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGC ATGTTCGGGTTCGTCACCTTCGTGTACCCTGAGACGGTGAAGCTGATCTTGGCCAAGGGC AATCCGCATTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCTTACAAGGAGAAGGGCAAG GTCCCCGACAAGTACAGGAAACATCAAGGTGACTTCTCCGGCTGCACGACCCCCACTGGC CTGGACGGCAGAGACCCATTCGATCTGCATCAGCTCGGTGCGAGGATGCTGCAGCACTCC AATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGCAGCAGCAGGCTGCCGAG CTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACCTCCAGCTGCTCGACCTC AAGAATAGAGCCGCAGCTGCTGTCACAACAGCAATGGCGATGACAATTCCCACCGCCAAT GCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCGCCTGATTCTGGC GAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTCAACGGAGGAGGT GATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGACCAAAGCTTGGAG CACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTCTCAGCTCACCAA AGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGTGCATCTCATGTA GGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGGCCCTCTACTTTG GATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCTGATCACGGAGCG ATTGGGATGTAAAGTTCTCTGCAATGGATGAGTGAATCCCCCAGCCTAATCATAGAACAC AAGAAGCAAAAGAAAAGCGATAGTGGAATATAGGAGAAAAGGAGTGAAGTGTCAGCATAG TGTTAGCTCCCTTGTTTATTTCTTTTTGGTTGCCCTTTTTAGTGGGTAGCTCTATTAAAA CCACAAGTGAAGATGCCATTAGCCTTTGACTAGGAAAAAAAGCCAGTAGATGCAGACATG CAGTGTTGTGAGATACTTAATATATATAAGCAATCCAGTGTTACCCCCTTATAATATTAG ATATACTAGTAGTACTCAATTACAACTGCCATCAAC