Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0326300-03
CDS Infomation

cds chromosome:IRGSP-1.0:3:11902854:11905892:-1 gene:Os03g0326300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING-type domain containing protein. (Os03t0326300-01);Hypothetical conserved gene. (Os03t0326300-02);Hypothetical conserved gene. (Os03t0326300-03)
Sequence

ATTAACATTTATTTTATTTTGTTTGGTCCAGGATCAAGACCTGACACTTCTGGTTATCCC
CAATCCAGTGAGAGACAATTAACTGCAGTAAGCAGTTTCAGTTCTGCATCCCCCTTCTCA
GAGTCAAGTCAGCTGGCATCTTCTAGTAAACCACCATACTTACATTTACCACGCAATCAT
CTGGGAAGGCGATCTTTCATGTCAAAACCAGTGTACCCGCTTGTCTTCCGTAATCCAGTG
TCGGAAGCAGAAGCCTCTGGGATGCCTGAAGCTAGTAATATTGGGCGAACAACACCTAGT
GATGATTCTCCTGTGTGGCGGCGCAGCTTGGCAAGTCCTGAGCTCAAGTTCCACAATGCA
TTGAGTGAGTTTCGGAAGGTAGAGGCTTCACCAGAGCCAAACACAAGCTCAAGGAGGGAA
GGATTCAGATGGAGCAATGCTAGTAGCTATGATTTTGGATATGATGGTGATGCCATTGAC
ATTTCAGATCATATTAGTGTGGAGTCCCAAAGATCCCCGACAAGTTCAGTGAGGTTTCTT
AAGTGTGGCTTATGCGAGAGATTCCTGCGGCAGAAATCACCATGGACCTCAAACCGGATT
GTTCAAAATTCTGATATGCCAGTAGCGGCGGTCCTTCCATGTCGCCATGTCTTCCACGCA
GATTGTCTCGAGGAAAGTACTCCAAAGAGTCAAGTCCATGAACCACCTTGCCCTCTATGC
ACACGAGGCACTGATGATGAAGGGTGTGTCTCATTCTCGGAACCATTACATGTTGCCCTC
AGATCTGCTCGTAGGAATCAAGGTAATAGTTTCTCTCTTGGTGGTTCTGGTGGAAGTACC
AGCGCAAATCCTTCTCGTAGTGATCATGGCTTGAAGAGAAATCAGTCTGCCCTTGTGGCA
AGACGCAGTGGCACGATGTTCCGAAACCGTTTTAAGAAGCAGTTCTCCTTCAAGGGGAGG
TTTGGGAAAGATCTCTTCGGTGGTAGAGTTTTCAAGAAGGTTGGATCATCGTCTTCTTCA
GGTCAACAGGACGATCGTCAACAGCCGAAAGCCTGA

Peptide Sequence

PEP ID

Os03t0326300-03
PEP Infomation

pep chromosome:IRGSP-1.0:3:11902854:11905892:-1 gene:Os03g0326300 transcript:Os03t0326300-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING-type domain containing protein. (Os03t0326300-01);Hypothetical conserved gene. (Os03t0326300-02);Hypothetical conserved gene. (Os03t0326300-03)
Sequence

INIYFILFGPGSRPDTSGYPQSSERQLTAVSSFSSASPFSESSQLASSSKPPYLHLPRNH
LGRRSFMSKPVYPLVFRNPVSEAEASGMPEASNIGRTTPSDDSPVWRRSLASPELKFHNA
LSEFRKVEASPEPNTSSRREGFRWSNASSYDFGYDGDAIDISDHISVESQRSPTSSVRFL
KCGLCERFLRQKSPWTSNRIVQNSDMPVAAVLPCRHVFHADCLEESTPKSQVHEPPCPLC
TRGTDDEGCVSFSEPLHVALRSARRNQGNSFSLGGSGGSTSANPSRSDHGLKRNQSALVA
RRSGTMFRNRFKKQFSFKGRFGKDLFGGRVFKKVGSSSSSGQQDDRQQPKA

Transcript Sequence

Transcript ID

Os03t0326300-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:11902854:11905892:-1 gene:Os03g0326300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING-type domain containing protein. (Os03t0326300-01);Hypothetical conserved gene. (Os03t0326300-02);Hypothetical conserved gene. (Os03t0326300-03)
Sequence

ATGAAACAACATAACTTGGTAATCTTAACTTCTGCACACAAATAGTTAGTGTTAAAGGTG
AGTTCTAGCTCTCTCAATACTGGAGCTCTGTATTCTTGCTTGATGAAGCTACACGTTCAA
ATGAAGCATACACACAACACAAAAGCTTATGAATAAACTATGTTTTTTTTTTCTGAATTT
AGAGAGATCGACATGATTTTTTCCTGTAAAGATACATTCCATCAGTTTTTCTTCTAATAT
TATGTTTAGAGAAAACAGGTCTATACCAAGCAAATGCCTAGTTTTGATATATACTGTTGG
AACCTATCAGTTTTCTTTAGTGCCACTTAAAGTTGACTTCATGCATATGCTGCTGCATCA
CAATTACTGAACTGATATCATCTCCCCCATTGTGAAAAAAAAAAGAAGATCTGTGCGCAG
TATGCACACTCTGCTCCTTTGCTCCTCTTCAACTTCCAACAATCAAGAAACTGCTATTGT
TGTAAACGAGGAATATAACTAGCAGGCTTGCGAATTGCTTAATTTCCCTTGCATGCTTTC
TGTCTGGTCAATTGGAGAGGGGGTTCTGATCTGTGACAGCGCCTGAAGAGGGAGTGGTGG
AAGACTTGTCGGTGGCGGCCACAGTCATTGCTCTGCAGCAGAGTGACGTAGGTGTCCTTG
GCAACTGGCAAGGGTGGCACCATGAGCAAGCAAGAGAACAGGGAAGAGTGTAGGCACTCA
GTTTGATCTTGTTGAGGGGAAACAACGATTAGGTCGAGAAAGTGATCTGGTGATAATTAA
GCGATTTTCTTTATGATCTACTCCAAGCATGTCTTCTCATTAGCAATCAGAACACACCTG
TGAGTTTTGTCTGAGAGTATTAACCACTTAAATTTTAACTTTTAACTCTATCATGTATCA
AGAATTAACACATAAATGCTGTTTAGACGGGCTTTTTTTTTTTTAAAGATTGTCCTGGTT
ATGCCGCTGGGGTACGTGTTGGCCGTTCTCTTTTAAGGTTCATCTAATCTTTCACATCAA
ATGCTTTACTAAACAGCATGCCAGTCTGTATACAGGGATCACATATTATATCGAATTTAT
CTGTCTTGTGAATCCCGGAATACTTGAACCGGAAGAATAATGTTCCCATGAGAATAAAGA
TGAATATATGGTGTGGAACTTGGGTGTAAAATCCGTACTGATATGTGATATACAAACATA
AGCACGAGTTGGAGAACTACAACTATATATTGCGGATCATACTTTAGTCATGCATATCAC
GGATATATACAATTTATTGACTAGGCATATTAGACTGTTCAGAAAAAAAAGATTAGAATA
AGTGGTTTTGCCCATTTAGTTATCCAGTTTTCCATTCTCACTGATTTTAAGCAATATAAG
CTACCTTGGCAACTGAAATCTAAGGAAAACTATTAAATTCCTGTAAACATCTGTAATGAG
ATGTGCATTGCTGGGGTGCAAGTTAAAGACAGCTGCTCATGCAATTGCTCAAAACTATTT
CTTCCATCATGCTTTCCTGCAACGATTTGAAGCAGGCCACAAAACATTCCTTGGACCCCT
TACTGTTGAATTAACATTTATTTTATTTTGTTTGGTCCAGGATCAAGACCTGACACTTCT
GGTTATCCCCAATCCAGTGAGAGACAATTAACTGCAGTAAGCAGTTTCAGTTCTGCATCC
CCCTTCTCAGAGTCAAGTCAGCTGGCATCTTCTAGTAAACCACCATACTTACATTTACCA
CGCAATCATCTGGGAAGGCGATCTTTCATGTCAAAACCAGTGTACCCGCTTGTCTTCCGT
AATCCAGTGTCGGAAGCAGAAGCCTCTGGGATGCCTGAAGCTAGTAATATTGGGCGAACA
ACACCTAGTGATGATTCTCCTGTGTGGCGGCGCAGCTTGGCAAGTCCTGAGCTCAAGTTC
CACAATGCATTGAGTGAGTTTCGGAAGGTAGAGGCTTCACCAGAGCCAAACACAAGCTCA
AGGAGGGAAGGATTCAGATGGAGCAATGCTAGTAGCTATGATTTTGGATATGATGGTGAT
GCCATTGACATTTCAGATCATATTAGTGTGGAGTCCCAAAGATCCCCGACAAGTTCAGTG
AGGTTTCTTAAGTGTGGCTTATGCGAGAGATTCCTGCGGCAGAAATCACCATGGACCTCA
AACCGGATTGTTCAAAATTCTGATATGCCAGTAGCGGCGGTCCTTCCATGTCGCCATGTC
TTCCACGCAGATTGTCTCGAGGAAAGTACTCCAAAGAGTCAAGTCCATGAACCACCTTGC
CCTCTATGCACACGAGGCACTGATGATGAAGGGTGTGTCTCATTCTCGGAACCATTACAT
GTTGCCCTCAGATCTGCTCGTAGGAATCAAGGTAATAGTTTCTCTCTTGGTGGTTCTGGT
GGAAGTACCAGCGCAAATCCTTCTCGTAGTGATCATGGCTTGAAGAGAAATCAGTCTGCC
CTTGTGGCAAGACGCAGTGGCACGATGTTCCGAAACCGTTTTAAGAAGCAGTTCTCCTTC
AAGGGGAGGTTTGGGAAAGATCTCTTCGGTGGTAGAGTTTTCAAGAAGGTTGGATCATCG
TCTTCTTCAGGTCAACAGGACGATCGTCAACAGCCGAAAGCCTGACTGAAAAAAAAAATA
CATGAAGTAGCTAGTATGAAATCGCGCGATTATAATGTGCCCTGCTGCTACTCTAGCCCC
TGTTTAATCGAGTGTGTCAAGAAGTCGTAGTCCATGTATAATTTATGATAGAAGGTGAAA
TTCTGTATGCATGCGGCCCTGCGCTAGCACTTATTAGGTGGTGGTGTTTTTGTTTTGTTG
GACTGGAGTTCGCCTTGCATGTGGCACCATAATTATGCTCTCGGCATGAATGCTTACTGT
TAAGTATTGACAACTATCTCTTCGGCTTT