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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0321800-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:11652979:11653916:-1 gene:Os03g0321800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to WRKY transcription factor 55. (Os03t0321800-01);Similar to WRKY transcription factor 55. (Os03t0321800-02)
Sequence

ATGAGCGGCGGCGCGAGGAGGGTGCTCGAGGCGTGGAGGCTCGGGGTGGTGAGGTACGGC
GACGCCCTCGGGCTCCAGGAGAGGCTCGTCACCGACCGGAGGGCCGGCCGGGTCCCCGAC
CTCGTGCTGTCGCTGCAGCACCCGCCGACCTACACCCTCGGCAAGCGGCGCACCGACCAC
AACCTGCTCCTGCCGGAGGCCGACCTCAGGGCGCTCGGCGCCGACATCCACCGCACGGAG
CGCGGCGGCGACGTCACCTTCCACGGGCCGCGGCAGGCCGTGCTCTACCCGATCCTCTCG
CTCCGGGCCATCGGCCTCGGCGCGCGGAGGTACGTGGAGGGGCTCGAGTCCGCCATGATC
GAGGTGGCGGCGCTGTACGGCGTCCAGGCGTGCCCGGGTGCCGCCGGCGAGACCGGCGTG
TGGGTCGGGGACAGGAAGATTGGCGCCATCGGGGTCAGGATCTCGTCAGGGTTTACTTGC
CATGGTCTGGCCTTCAACATCGATCCTGATTTGGGTTTCTTCGAGCACATTGTGCCCTGC
GGTATCGCCGACAAGGAGGTCACCTCTCTGCGGCGAGAGGCGGCGGTGGAGCTCCCTCCC
GACGAGGTGATCCATGATCAGCTCGTGCAGAGCTTAGCAAGAACATTCTGCTTCAGCGAT
GTGGAATTCAAGGATGAATCCGAGTGCGCCGACATGGTTTGCTTAGCTGCAGATAAGCAA
TCCTGA

Peptide Sequence

PEP ID

Os03t0321800-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:11652979:11653916:-1 gene:Os03g0321800 transcript:Os03t0321800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to WRKY transcription factor 55. (Os03t0321800-01);Similar to WRKY transcription factor 55. (Os03t0321800-02)
Sequence

MSGGARRVLEAWRLGVVRYGDALGLQERLVTDRRAGRVPDLVLSLQHPPTYTLGKRRTDH
NLLLPEADLRALGADIHRTERGGDVTFHGPRQAVLYPILSLRAIGLGARRYVEGLESAMI
EVAALYGVQACPGAAGETGVWVGDRKIGAIGVRISSGFTCHGLAFNIDPDLGFFEHIVPC
GIADKEVTSLRREAAVELPPDEVIHDQLVQSLARTFCFSDVEFKDESECADMVCLAADKQ
S

Transcript Sequence

Transcript ID

Os03t0321800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:11652979:11653916:-1 gene:Os03g0321800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to WRKY transcription factor 55. (Os03t0321800-01);Similar to WRKY transcription factor 55. (Os03t0321800-02)
Sequence

GACGGTAGCCGGAGGAGGCAGCCCGCCGCCGTGTCCTCTTCTCCTCGCGGCTGCGGAGGA
GATGAGCGGCGGCGCGAGGAGGGTGCTCGAGGCGTGGAGGCTCGGGGTGGTGAGGTACGG
CGACGCCCTCGGGCTCCAGGAGAGGCTCGTCACCGACCGGAGGGCCGGCCGGGTCCCCGA
CCTCGTGCTGTCGCTGCAGCACCCGCCGACCTACACCCTCGGCAAGCGGCGCACCGACCA
CAACCTGCTCCTGCCGGAGGCCGACCTCAGGGCGCTCGGCGCCGACATCCACCGCACGGA
GCGCGGCGGCGACGTCACCTTCCACGGGCCGCGGCAGGCCGTGCTCTACCCGATCCTCTC
GCTCCGGGCCATCGGCCTCGGCGCGCGGAGGTACGTGGAGGGGCTCGAGTCCGCCATGAT
CGAGGTGGCGGCGCTGTACGGCGTCCAGGCGTGCCCGGGTGCCGCCGGCGAGACCGGCGT
GTGGGTCGGGGACAGGAAGATTGGCGCCATCGGGGTCAGGATCTCGTCAGGGTTTACTTG
CCATGGTCTGGCCTTCAACATCGATCCTGATTTGGGTTTCTTCGAGCACATTGTGCCCTG
CGGTATCGCCGACAAGGAGGTCACCTCTCTGCGGCGAGAGGCGGCGGTGGAGCTCCCTCC
CGACGAGGTGATCCATGATCAGCTCGTGCAGAGCTTAGCAAGAACATTCTGCTTCAGCGA
TGTGGAATTCAAGGATGAATCCGAGTGCGCCGACATGGTTTGCTTAGCTGCAGATAAGCA
ATCCTGATTGTTTTACTATGTATACTGAACTTAGAGTTCTTCAGAACGTCTTGCCGTCAA
GTCTGGAAATGACATTAGGAAATTTTCGTCTGGTTTTGTTCATTGCGAATGAAGGTGACC
TCCATTTTGGAGCATAAATGAAGAATAAATGATGCTGT