Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0320900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:11595454:11599057:1 gene:Os03g0320900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIRESCENT 2 description:Guanylate kinase family protein. (Os03t0320900-01)
Sequence

ATGCTTCTCACGCGAAGGTTCTCCTCCGCCCTCGCGCGCTCCCCCCTTCTCCCCAGGTCC
CTCCCTCCTCCGCGGGCCGTGCCCGCCACCCCTCCGGCGCCCCGCCCGCCGCCGCGCCGC
CTCATGTCCTCCTCCTCCTCCGGCTGGCACCACTCCTCTCGCCCGCCCCCGCCGCCCCCC
TCCGGCGCCGACAAGGATCAGCTGTTCCGGGGGCTGGAGGCGGCGCTCGGCACGACGTTC
AGCTCGGAGCCGCTCGCGCCGCCGCCGCAGCCGATGATCCTCGTCATCAGCGGGCCCAGC
GGCGTCGGCAAGGACGCTGTCATCCAGAGGCTGCAAGAAGAGAGGGAGGGGATGCATTTC
GTTGTCACCGCGACAAGCAGAGCGAAGCGGCCCGGTGAAGTTGATGGGAAGGACTATTAC
TTCGTCACCAAGGAGGAGTTCCTCACGATGATTGAAAGGAAGGAGTTGCTCGAGTACGCA
CTTGTCTATGGGGAGTATAAGGGGATCCCCAAGCAGCAGATCCGTGATTACATGGCGAAA
GGTTATGATATTGTCTTGAGAGTGGACATTCAAGGAGCAGCAACCTTGAGAGAGATTCTT
GGCGAATCAGCAATTTTCATCTTTTTGGTTGCAGAGAGTGAAGAGGCACTTGTCAAAAGG
CTAATTCACCGCAAAACAGAAACATCAGATATGCTTCTTGTCAGAGTTGCAACGGCCAGA
GAAGAGGTGAAACGCATGAACAATTTTGATTATGTAGTTGTCAATTCTGAAGGGAATCTT
GAGGGGGCTGTTAAACAGGTGGAGTCTATCATTGATGCTGAGAAGGCTAAGGTCCACAAA
CGTACGGTTAATATCTAG

Peptide Sequence

PEP ID

Os03t0320900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:11595454:11599057:1 gene:Os03g0320900 transcript:Os03t0320900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIRESCENT 2 description:Guanylate kinase family protein. (Os03t0320900-01)
Sequence

MLLTRRFSSALARSPLLPRSLPPPRAVPATPPAPRPPPRRLMSSSSSGWHHSSRPPPPPP
SGADKDQLFRGLEAALGTTFSSEPLAPPPQPMILVISGPSGVGKDAVIQRLQEEREGMHF
VVTATSRAKRPGEVDGKDYYFVTKEEFLTMIERKELLEYALVYGEYKGIPKQQIRDYMAK
GYDIVLRVDIQGAATLREILGESAIFIFLVAESEEALVKRLIHRKTETSDMLLVRVATAR
EEVKRMNNFDYVVVNSEGNLEGAVKQVESIIDAEKAKVHKRTVNI

Transcript Sequence

Transcript ID

Os03t0320900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:11595454:11599057:1 gene:Os03g0320900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIRESCENT 2 description:Guanylate kinase family protein. (Os03t0320900-01)
Sequence

AAACAAATCACTCCAATCCCCACATCGGCAGCACATCCCCCTTCGCTCCCCTCCTCGTCG
CCCTCCTCTGCCCTCCCCTCCCCTCCTTCCGGAACCTTCTAGATGCTTCTCACGCGAAGG
TTCTCCTCCGCCCTCGCGCGCTCCCCCCTTCTCCCCAGGTCCCTCCCTCCTCCGCGGGCC
GTGCCCGCCACCCCTCCGGCGCCCCGCCCGCCGCCGCGCCGCCTCATGTCCTCCTCCTCC
TCCGGCTGGCACCACTCCTCTCGCCCGCCCCCGCCGCCCCCCTCCGGCGCCGACAAGGAT
CAGCTGTTCCGGGGGCTGGAGGCGGCGCTCGGCACGACGTTCAGCTCGGAGCCGCTCGCG
CCGCCGCCGCAGCCGATGATCCTCGTCATCAGCGGGCCCAGCGGCGTCGGCAAGGACGCT
GTCATCCAGAGGCTGCAAGAAGAGAGGGAGGGGATGCATTTCGTTGTCACCGCGACAAGC
AGAGCGAAGCGGCCCGGTGAAGTTGATGGGAAGGACTATTACTTCGTCACCAAGGAGGAG
TTCCTCACGATGATTGAAAGGAAGGAGTTGCTCGAGTACGCACTTGTCTATGGGGAGTAT
AAGGGGATCCCCAAGCAGCAGATCCGTGATTACATGGCGAAAGGTTATGATATTGTCTTG
AGAGTGGACATTCAAGGAGCAGCAACCTTGAGAGAGATTCTTGGCGAATCAGCAATTTTC
ATCTTTTTGGTTGCAGAGAGTGAAGAGGCACTTGTCAAAAGGCTAATTCACCGCAAAACA
GAAACATCAGATATGCTTCTTGTCAGAGTTGCAACGGCCAGAGAAGAGGTGAAACGCATG
AACAATTTTGATTATGTAGTTGTCAATTCTGAAGGGAATCTTGAGGGGGCTGTTAAACAG
GTGGAGTCTATCATTGATGCTGAGAAGGCTAAGGTCCACAAACGTACGGTTAATATCTAG
TCAATGCTCATAAGTCACATGCTCTTTTAACGGTTTGGAGGAAAATTACCTGGTATTTTT
AATCAATTCAAGTTTGAACTATTGTGGAGGAAATCGCCAATGACAATCTGACCTGACTCT
TACAAAAAAGGCCAATTTGACTTACATTAAATTTGTAGCTGTAAGTCAGAAAGTGAAGTG
CATGGCAAGTCATTGGAGTTAAATACTGAATATCCTGATTCAAGTGGCTTATAACAGCAA
TGTACTTGTGCAACTCTTTCTGGGTAGAAGTAGGTACTTTTTATTATTTATATATTATCT
GTATTTTATTTGTTTGTTCGAATATTACAAACTACTAATAACTGCTTGGGATGAATCCTT
ATGCTACGGATATTTCCTTTTCC