Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0320800-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:11586569:11590208:1 gene:Os03g0320800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os03t0320800-01);Similar to Leucine Rich Repeat family protein, expressed. (Os03t0320800-02)
Sequence	ATGTTCTCAGGTCAAATTCCGGCTGAATTGACTAAATTGGCTAATTTGGGACATCTCAAT CTCTCTTCCAATGGTTTTGGTGGTGCATTGCCTTTGGGTCTCCGGAACTTAAGGAAACTG AAATATCTGGACCTTCGTGGCAATGGCTTTACTGGCAAATTGGATGACATATTTGCAGAA TTACAGAGCCCGGTTCATGTTGATTTGAGCTGCAACCGGTTCTCGGGTTCATTGATATCA ATATCTGACAACTCATCTGTGGTTAGCACACTTCAGTACTTGAATGTTAGCCACAATATG CTGTCAGGAGCATTATTTGAGAGTGATCCAATGCCTCTGTTTGATAGCCTGGAGGTGTTT GATGCAAGTTACAATATGCTTGAGGGCAATATTCCACCATTTAATTTTGTGATTTCCCTC AAGGTGTTGCGCTTGCAGAACAATAATTTTTCTGGGTCCATTCCAGAGGCGCTCTTTCGA CAGACCTCCATGGTGTTGACTGAACTTGACCTCAGCTGCAATCAACTTACAGGTCCAATT AGACGTGTAACATCAATGAACTTAAAGTACCTGAATCTGTCATCCAACAGCCTTCAGGGA ACTTTGCCCATCACATTTGGGAGCTGTTCAGTTGTTGATCTGAGTAGAAACATGCTTTCA GGGAACCTATCAGTTATCCGAACTTGGGGAAATTATATTGAGACGGTCGATTTGACCTCA AATCGGTTAACAGGAACATGGCCAAATGAGACAACCCAGTTTTTGAGGTTGACTTCGTTG AGGATTTCCGACAACTTGCTTGCAGGAGAACTACCAACTGTTATTGGAACTTATCCTGAG CTGATTTCCATCGACTTGAGTCTCAATCAGCTTCATGGACCATTGCCTGGAAATCTGTTT ACAGCAGTCAAACTGACCTATCTAAATCTGTCAGGAAACAGCTTTGCAGGGACTCTTCCT CTTCCTAATTCTGAAGCAAAGAGCTCAACTTTTATAGACTTGTTAGTTCTCCCTGTACAA ACTTCAAACCTCTCATTTGTTGATCTTTCAAACAATTCTTTGAATGGCTCACTGCCTTCG GGCATTGGTGCTTTGAGTGGATTGGCATTACTGAACCTTTGCCAAAACAACTTTTCGGGG CAAATTCCGAGAGAAATCACCAAGCTAAAGCATTTGATATACATTGACTTATCAAAAAAC AATTTCAATGGTACCATACCCGAGGACCTCCCTGATGATCTTGTTGAGTTCAATGTCTCC TACAACAATCTATCTGGCTCAGTTCCAAGCAACTTGTTGAAATTTCCTGATTCATCTTTC CATCCAGGAAATGAGCTGCTTGTTCTTCCTCATTCTGCATCACAAAATGGCCCTGACAGT TCTGGAGGGGGGAGACGCGGTATGAAACGTGGAATTCTGTATGCATTGATTGTATGTGTT GTAGTCTTTGTTACTGGGATTATTGTGCTTTTGCTTGTTCATTGGAAGATCTCTAGCTGG AAGAGTAGTGAAAAAGGAACTAGCCAAAGCAAACAACCCGCAACTGTAGGAGTTGCCATG GGACATCCTACAAGGCTACACTTGACAATGGATATGCACTGA

Peptide Sequence

PEP ID	Os03t0320800-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:11586569:11590208:1 gene:Os03g0320800 transcript:Os03t0320800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os03t0320800-01);Similar to Leucine Rich Repeat family protein, expressed. (Os03t0320800-02)
Sequence	MFSGQIPAELTKLANLGHLNLSSNGFGGALPLGLRNLRKLKYLDLRGNGFTGKLDDIFAE LQSPVHVDLSCNRFSGSLISISDNSSVVSTLQYLNVSHNMLSGALFESDPMPLFDSLEVF DASYNMLEGNIPPFNFVISLKVLRLQNNNFSGSIPEALFRQTSMVLTELDLSCNQLTGPI RRVTSMNLKYLNLSSNSLQGTLPITFGSCSVVDLSRNMLSGNLSVIRTWGNYIETVDLTS NRLTGTWPNETTQFLRLTSLRISDNLLAGELPTVIGTYPELISIDLSLNQLHGPLPGNLF TAVKLTYLNLSGNSFAGTLPLPNSEAKSSTFIDLLVLPVQTSNLSFVDLSNNSLNGSLPS GIGALSGLALLNLCQNNFSGQIPREITKLKHLIYIDLSKNNFNGTIPEDLPDDLVEFNVS YNNLSGSVPSNLLKFPDSSFHPGNELLVLPHSASQNGPDSSGGGRRGMKRGILYALIVCV VVFVTGIIVLLLVHWKISSWKSSEKGTSQSKQPATVGVAMGHPTRLHLTMDMH

Transcript Sequence

Transcript ID	Os03t0320800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:11586569:11590208:1 gene:Os03g0320800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os03t0320800-01);Similar to Leucine Rich Repeat family protein, expressed. (Os03t0320800-02)
Sequence	CATGTTCTCAGGTCAAATTCCGGCTGAATTGACTAAATTGGCTAATTTGGGACATCTCAA TCTCTCTTCCAATGGTTTTGGTGGTGCATTGCCTTTGGGTCTCCGGAACTTAAGGAAACT GAAATATCTGGACCTTCGTGGCAATGGCTTTACTGGCAAATTGGATGACATATTTGCAGA ATTACAGAGCCCGGTTCATGTTGATTTGAGCTGCAACCGGTTCTCGGGTTCATTGATATC AATATCTGACAACTCATCTGTGGTTAGCACACTTCAGTACTTGAATGTTAGCCACAATAT GCTGTCAGGAGCATTATTTGAGAGTGATCCAATGCCTCTGTTTGATAGCCTGGAGGTGTT TGATGCAAGTTACAATATGCTTGAGGGCAATATTCCACCATTTAATTTTGTGATTTCCCT CAAGGTGTTGCGCTTGCAGAACAATAATTTTTCTGGGTCCATTCCAGAGGCGCTCTTTCG ACAGACCTCCATGGTGTTGACTGAACTTGACCTCAGCTGCAATCAACTTACAGGTCCAAT TAGACGTGTAACATCAATGAACTTAAAGTACCTGAATCTGTCATCCAACAGCCTTCAGGG AACTTTGCCCATCACATTTGGGAGCTGTTCAGTTGTTGATCTGAGTAGAAACATGCTTTC AGGGAACCTATCAGTTATCCGAACTTGGGGAAATTATATTGAGACGGTCGATTTGACCTC AAATCGGTTAACAGGAACATGGCCAAATGAGACAACCCAGTTTTTGAGGTTGACTTCGTT GAGGATTTCCGACAACTTGCTTGCAGGAGAACTACCAACTGTTATTGGAACTTATCCTGA GCTGATTTCCATCGACTTGAGTCTCAATCAGCTTCATGGACCATTGCCTGGAAATCTGTT TACAGCAGTCAAACTGACCTATCTAAATCTGTCAGGAAACAGCTTTGCAGGGACTCTTCC TCTTCCTAATTCTGAAGCAAAGAGCTCAACTTTTATAGACTTGTTAGTTCTCCCTGTACA AACTTCAAACCTCTCATTTGTTGATCTTTCAAACAATTCTTTGAATGGCTCACTGCCTTC GGGCATTGGTGCTTTGAGTGGATTGGCATTACTGAACCTTTGCCAAAACAACTTTTCGGG GCAAATTCCGAGAGAAATCACCAAGCTAAAGCATTTGATATACATTGACTTATCAAAAAA CAATTTCAATGGTACCATACCCGAGGACCTCCCTGATGATCTTGTTGAGTTCAATGTCTC CTACAACAATCTATCTGGCTCAGTTCCAAGCAACTTGTTGAAATTTCCTGATTCATCTTT CCATCCAGGAAATGAGCTGCTTGTTCTTCCTCATTCTGCATCACAAAATGGCCCTGACAG TTCTGGAGGGGGGAGACGCGGTATGAAACGTGGAATTCTGTATGCATTGATTGTATGTGT TGTAGTCTTTGTTACTGGGATTATTGTGCTTTTGCTTGTTCATTGGAAGATCTCTAGCTG GAAGAGTAGTGAAAAAGGAACTAGCCAAAGCAAACAACCCGCAACTGTAGGAGTTGCCAT GGGACATCCTACAAGGCTACACTTGACAATGGATATGCACTGACAGTAAAGTGGCTGAAG GAGGGATTTGCTAAGAGCAAGAAGGAATTTTCTCGTGAAATAAAGAAGCTTGGAACTGTT AAACATCCCAATTTAGTGTCCATGCGAGGCTACTACTGGGGTCCTAAAGAGCATGAAAGG ATCATTATATCAGACTATGTAGATTCTACTTCTCTTTCTTCTTTCTTGTCTGAGTTTGAA GAACGGAATATTCCGCCTCTATCAGTGGACCAGCGTCTGAACATTGCAATTGACATTGCG CACTGTCTAGATTACCTACATAACGAGCGAGTGATCCCACACGGCAACCTGAAGTCATCC AATGTCCTGATCCAGAACGCAAGTCCATCTGCTTTGGTTACCGACTACAGCCTTCACAGG CTCATGACTCCAATCGGCATGGCCGAACAGGTCCTCAATGCAGGGGCCCTCGGATACTCT CCACCTGAGTTTGCTAGCTCCAGTAAGCCGTGCCCTTCCCTGAAGAGTGATGTGTATGCC TTCGGTGTCATTCTACTCGAGCTGCTGACAGGGAAGATTGCCGGGGAAATCGTTTGCGTG AACGATGGTGTGGTCGACTTGACGGACTGGGTAAGGATGCTAGCAAGGGAGGAGCGCGTT TCGGAGTGCTACGACAGGCGGATCGTGGAAGCTCATGGCTCAGGTGGCGCCCCAAAGGCG CTGGAGGACATGCTGCGCATCGCCATCCGGTGCATCCGGTCTGCATCCGAAAGGCCGGAG ATTCGGACAGTGTTTGAGGACCTTTCATCCCTGTCATCTTGACATAAAATTTCTTGACAG TGTACATCTCGTACTTACATCAGTTTGCCGAAATTCTGGGAAGGGTATACTAACATCTGT GAACTGTTTAGGATTTTGTGGTGGTGTTCTGGTCTCTTGAGCATTTGATTGTTTGGGTTC CTCTTCCTTAGAAGCGTCGATTCATTTTTAGTTAGTCCATGATTTTAGCCCTAGATGATT GTGAGAATAAGTTTGTGCATTGTTATTTTGAACATCAGAAAGAAAATAAAGATATGTGTA GTTATTTTTCTCT