Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0320400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:11560162:11562564:1 gene:Os03g0320400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 16, SUVH Histone Methyltransferase 3 description:SET domain containing protein. (Os03t0320400-01)
Sequence	ATGGAAAGTAACCAACACAAAGCATCAGATCCACAGGATTCTATGGTTCATTTAGATCTG GATGAAGATAAGATAATGGTGACATCAGCATTACCATGTCCTTCAATGTCCGTGGGAAAA TCGGTTATGAGGAAGAGGGGAAGACCAAGCAGGCATGCACGAGGAACTTCGTTGTCTTCT GTTACCCCAGAAGGGTGCAAGAAGATGGAGGGTCGATCATATAATTTGCGTAGTGATTCA ACAATTTTGTTGAGAAATTCATGTTTGCTAATAGCTGATGGATCGACAAAACAGAAGCGA TCTTGGGGACTTGACAAGGATGACTTGCATATACCTTTCTTTCAAATTTCAGATAATCCT AGGGAAGCTGTTGATGATATACTCATGACATTTGGTGGACTACATCGGAGGATCATGCAG TTGATAGATGTGAAAATGGCTTCAAAACAGCTTGTCTTCCAAGCATTGAACCTCATGAGA AAAGTTGGATATCATGTTAACAAGGACAAGAGGGTTGGAGAGGTCCCAGGAGTTAAAATT GGTGACATATTCTACTCTAGAATTGAGATGCTCTTGGTAGGGCTACATAGTAACATCAAT AGAGGAATTGAATTCATGTCTGGTGCTTTTATTAATAAGGAAGATAAGATAGCTACATGC ATTGTGTCATCTGGAATGTATGAGAATGGTGATGATGACCCATATACTTTGGTATATAAT GGCCAAGGCAAAGTCCACCATAAGCTTGAGAGAGGTAACTATTCGTTGAATCAGAGTTTT ATTAGAAGGAATCATATTAGACTTATTCGTAGTGAACCAAATCCATTGGTTAGGCTAGGC TCAAAGGAAAAAATATACATATATGATGGTCTTTATAAGATCGAAGAAAAGTACAGACAA ACAACAAAATCTCGTTCTAACTTAAAGTTCAACAAGTTGGTCAGGGAACTAGGCCAGCCT AATGGCATTGTAGTATGGAAGAATACTCAGAAATGGAGGGAAAATCCATCTTGTAGAGAT CATGTCATAATGCCTGACATGTCAAATGGTGCAGAAATAGCTCGTGTTTGTGTTGTAAAC AACATTGATAGTGAGGATGCTCCTAACAACTTTACCTATTCAACTAAACTTGATAATGGG AATCATATGGTTTCAGCAAACAAGATGTGTGTCTGCAAATGCACAAGCTCATGCCTTGGT GAAGACAATTGCTCTTGTTTGAAAACAAATGGCAGCTATTTACCTTACAACTCTTCAGGA ATACTTGTTTGTCGAAAGACTATGATATATGAGTGCAATGATTCATGTGCTTGCACAATT AATTGCTCGAACCGAGTGGTACAGAGGGGTTCCTATCTACACTTTGAAGTGTTCAAGACG ATGGATCGAGGTTGGGGCCTTCGCAGTTGGGATCCCATTCCGGCGGGTGCATTTGTATGT GAATATGTTGGTGTAGTTATTGACAAAGATAGCTTAGTTGAAGAAGATGAATACATATTT GAGGTTACTAGACCAGAGCATAATTTAAAATGGAACTATTTACCAGAATTGATAGGTGAA CCTTCTTTCTATGACATGAATGATACATTCAAGAAGTTGTGTTAA

Peptide Sequence

PEP ID	Os03t0320400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:11560162:11562564:1 gene:Os03g0320400 transcript:Os03t0320400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 16, SUVH Histone Methyltransferase 3 description:SET domain containing protein. (Os03t0320400-01)
Sequence	MESNQHKASDPQDSMVHLDLDEDKIMVTSALPCPSMSVGKSVMRKRGRPSRHARGTSLSS VTPEGCKKMEGRSYNLRSDSTILLRNSCLLIADGSTKQKRSWGLDKDDLHIPFFQISDNP REAVDDILMTFGGLHRRIMQLIDVKMASKQLVFQALNLMRKVGYHVNKDKRVGEVPGVKI GDIFYSRIEMLLVGLHSNINRGIEFMSGAFINKEDKIATCIVSSGMYENGDDDPYTLVYN GQGKVHHKLERGNYSLNQSFIRRNHIRLIRSEPNPLVRLGSKEKIYIYDGLYKIEEKYRQ TTKSRSNLKFNKLVRELGQPNGIVVWKNTQKWRENPSCRDHVIMPDMSNGAEIARVCVVN NIDSEDAPNNFTYSTKLDNGNHMVSANKMCVCKCTSSCLGEDNCSCLKTNGSYLPYNSSG ILVCRKTMIYECNDSCACTINCSNRVVQRGSYLHFEVFKTMDRGWGLRSWDPIPAGAFVC EYVGVVIDKDSLVEEDEYIFEVTRPEHNLKWNYLPELIGEPSFYDMNDTFKKLC

Transcript Sequence

Transcript ID	Os03t0320400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:11560162:11562564:1 gene:Os03g0320400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 16, SUVH Histone Methyltransferase 3 description:SET domain containing protein. (Os03t0320400-01)
Sequence	ACCCTGCACACCACCCTGTTGCTTCCCTACATCCGCTACTTGAGACTCCTCCCCTATCAC CTATCTCTTCCTACCCCATCACATCCCGTCCTCGATCAGATACACCTCCTCTTGTCACTT CCCTCTATCCATCCCATCTCCTTCACCAAGGCCACCACTCCCCCTCATCATCATCTCCTC AACCACCCCGTGTGTGCACAATGGAAAGTAACCAACACAAAGCATCAGATCCACAGGATT CTATGGTTCATTTAGATCTGGATGAAGATAAGATAATGGTGACATCAGCATTACCATGTC CTTCAATGTCCGTGGGAAAATCGGTTATGAGGAAGAGGGGAAGACCAAGCAGGCATGCAC GAGGAACTTCGTTGTCTTCTGTTACCCCAGAAGGGTGCAAGAAGATGGAGGGTCGATCAT ATAATTTGCGTAGTGATTCAACAATTTTGTTGAGAAATTCATGTTTGCTAATAGCTGATG GATCGACAAAACAGAAGCGATCTTGGGGACTTGACAAGGATGACTTGCATATACCTTTCT TTCAAATTTCAGATAATCCTAGGGAAGCTGTTGATGATATACTCATGACATTTGGTGGAC TACATCGGAGGATCATGCAGTTGATAGATGTGAAAATGGCTTCAAAACAGCTTGTCTTCC AAGCATTGAACCTCATGAGAAAAGTTGGATATCATGTTAACAAGGACAAGAGGGTTGGAG AGGTCCCAGGAGTTAAAATTGGTGACATATTCTACTCTAGAATTGAGATGCTCTTGGTAG GGCTACATAGTAACATCAATAGAGGAATTGAATTCATGTCTGGTGCTTTTATTAATAAGG AAGATAAGATAGCTACATGCATTGTGTCATCTGGAATGTATGAGAATGGTGATGATGACC CATATACTTTGGTATATAATGGCCAAGGCAAAGTCCACCATAAGCTTGAGAGAGGTAACT ATTCGTTGAATCAGAGTTTTATTAGAAGGAATCATATTAGACTTATTCGTAGTGAACCAA ATCCATTGGTTAGGCTAGGCTCAAAGGAAAAAATATACATATATGATGGTCTTTATAAGA TCGAAGAAAAGTACAGACAAACAACAAAATCTCGTTCTAACTTAAAGTTCAACAAGTTGG TCAGGGAACTAGGCCAGCCTAATGGCATTGTAGTATGGAAGAATACTCAGAAATGGAGGG AAAATCCATCTTGTAGAGATCATGTCATAATGCCTGACATGTCAAATGGTGCAGAAATAG CTCGTGTTTGTGTTGTAAACAACATTGATAGTGAGGATGCTCCTAACAACTTTACCTATT CAACTAAACTTGATAATGGGAATCATATGGTTTCAGCAAACAAGATGTGTGTCTGCAAAT GCACAAGCTCATGCCTTGGTGAAGACAATTGCTCTTGTTTGAAAACAAATGGCAGCTATT TACCTTACAACTCTTCAGGAATACTTGTTTGTCGAAAGACTATGATATATGAGTGCAATG ATTCATGTGCTTGCACAATTAATTGCTCGAACCGAGTGGTACAGAGGGGTTCCTATCTAC ACTTTGAAGTGTTCAAGACGATGGATCGAGGTTGGGGCCTTCGCAGTTGGGATCCCATTC CGGCGGGTGCATTTGTATGTGAATATGTTGGTGTAGTTATTGACAAAGATAGCTTAGTTG AAGAAGATGAATACATATTTGAGGTTACTAGACCAGAGCATAATTTAAAATGGAACTATT TACCAGAATTGATAGGTGAACCTTCTTTCTATGACATGAATGATACATTCAAGAAGTTGT GTTAACAACCAAATTTGGTAATATCGGCATTGGGAAAGAAGATTAGATTGAAGCGAAGTC GGAGGCGGAGATCAAGTTCGGAAACAGAGCAGGGATTGGCTGGAGTCCAGATTAGCTACG ATAAGATCGGCTGAGTCTGAGTCGGACTAGGTAAGCCGATGTAGCCGATCCTAGCAATAC AACTTGATGTGTGATGTCGGGTTGGATTGAGGTGCTTCAAGGTGATTGCCGCACATGGAT AGAGTCCTGAGGAGGCAATTGTATCTATTAGTTAGGATGTTTTATGTAATTTCCTTAGAG ATATGATTGGGCAAAAGTCTGCCGCAAAGACTTATAGTATCTTAGAGTTTGTTAGAGATA GTAGTCGTGTCCGTTATGGACATATCTTGTAATTCTCGGGTATAAATATACCCGAGCCCT ATGTAACTTTTAACACACGTTCAATACAATCTCGGCGCATCGCCACCCTTTTACTTT