Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0316900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:11395982:11398885:1 gene:Os03g0316900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER I FAMILY MEMBER 15 description:Similar to NBD-like protein. (Os03t0316900-01)
Sequence

ATGGCGCCAACGGTGGAGATCAGCCACCTCTCCTTCACCTACCCGGGCATCGACGGCCGC
CCGCCGCCCGGCGCGCCGCCGCTCATCGAGGACGTCTGCTTCTCCCTCGACGCCGGCCAC
CGCTGCCTCCTCCTCGGCTCCAACGGCGCCGGCAAGACGACGATACTGAAGATACTGGGC
GGGAAGCACATGGTGGATCCGAGCATGGTGCGGGTCCTGGGCAGGTCGGCCTTCCACGAC
ACGGCGCTCACATCATCTGGCGACCTCTGCTACCTAGGCGGTGAGTGGAGGCGCGATGTT
GCCTTTGCGGGCTACCAGGTAAATATACAGATGGACATTTCAGCAGAGAAGATGATATTT
GGTGTTGTGGGCGTTGATCCTCAAAGGAGAGATGAGCTTATCAAGATTTTGGATATTGAC
CTTGCCTGGCGCATGCACAAGGCATCCGATGGTCAAAGGAGACGGGTCCAAATTTGCATG
GGGCTTCTCAAGCCATTCAAAGTTCTTCTTCTTGATGAGATCACAGTAGATCTGGATGTG
TTGGCAAGAGCAAATCTATTGACATATTTAAAGAAGGAATGCGAGGAACGGGGTGCTACA
ATCATCTACGCAACACATATTTTTGACGGACTTGATGATTGGCCAACACACATTGTGTAC
ATTGCCCGTGGGAAGTTGCAACTAGCACTGCCTTTAGAGAAGGTGAAAGAAATGAGCCAG
TTATCTCTCATGAGAACAGTGGAGAGCTGGCTGAGGAAAGAGAGAGATGAGGATAGGCGG
AGAAGAAAGGAACGGAAGGAGAAGGGCCTCCCAGAGTTTGACAAGGTTACTGAGGGGAGT
CGGGTTATAGGTGATCCCGCTGCCAGAGCGGTGAACAATGGGTGGGCAGCAGGGAGGCTC
GCCTCAACGGTTGCTGGTGAAGAGAATTTCATTTTCAGCTCTAACAGCGTTCTTAGGCAA
TAA

Peptide Sequence

PEP ID

Os03t0316900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:11395982:11398885:1 gene:Os03g0316900 transcript:Os03t0316900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER I FAMILY MEMBER 15 description:Similar to NBD-like protein. (Os03t0316900-01)
Sequence

MAPTVEISHLSFTYPGIDGRPPPGAPPLIEDVCFSLDAGHRCLLLGSNGAGKTTILKILG
GKHMVDPSMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGYQVNIQMDISAEKMIF
GVVGVDPQRRDELIKILDIDLAWRMHKASDGQRRRVQICMGLLKPFKVLLLDEITVDLDV
LARANLLTYLKKECEERGATIIYATHIFDGLDDWPTHIVYIARGKLQLALPLEKVKEMSQ
LSLMRTVESWLRKERDEDRRRRKERKEKGLPEFDKVTEGSRVIGDPAARAVNNGWAAGRL
ASTVAGEENFIFSSNSVLRQ

Transcript Sequence

Transcript ID

Os03t0316900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:11395982:11398885:1 gene:Os03g0316900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER I FAMILY MEMBER 15 description:Similar to NBD-like protein. (Os03t0316900-01)
Sequence

ACGCTTCTCTCCTCCTCCTCCTCAGCCCTTACCAACCAAAGCAAACCTTCCCCCTCCTCC
TCCTCCGGCCACCGCGGCGAGAGGCCCCGATGGCGCCAACGGTGGAGATCAGCCACCTCT
CCTTCACCTACCCGGGCATCGACGGCCGCCCGCCGCCCGGCGCGCCGCCGCTCATCGAGG
ACGTCTGCTTCTCCCTCGACGCCGGCCACCGCTGCCTCCTCCTCGGCTCCAACGGCGCCG
GCAAGACGACGATACTGAAGATACTGGGCGGGAAGCACATGGTGGATCCGAGCATGGTGC
GGGTCCTGGGCAGGTCGGCCTTCCACGACACGGCGCTCACATCATCTGGCGACCTCTGCT
ACCTAGGCGGTGAGTGGAGGCGCGATGTTGCCTTTGCGGGCTACCAGGTAAATATACAGA
TGGACATTTCAGCAGAGAAGATGATATTTGGTGTTGTGGGCGTTGATCCTCAAAGGAGAG
ATGAGCTTATCAAGATTTTGGATATTGACCTTGCCTGGCGCATGCACAAGGCATCCGATG
GTCAAAGGAGACGGGTCCAAATTTGCATGGGGCTTCTCAAGCCATTCAAAGTTCTTCTTC
TTGATGAGATCACAGTAGATCTGGATGTGTTGGCAAGAGCAAATCTATTGACATATTTAA
AGAAGGAATGCGAGGAACGGGGTGCTACAATCATCTACGCAACACATATTTTTGACGGAC
TTGATGATTGGCCAACACACATTGTGTACATTGCCCGTGGGAAGTTGCAACTAGCACTGC
CTTTAGAGAAGGTGAAAGAAATGAGCCAGTTATCTCTCATGAGAACAGTGGAGAGCTGGC
TGAGGAAAGAGAGAGATGAGGATAGGCGGAGAAGAAAGGAACGGAAGGAGAAGGGCCTCC
CAGAGTTTGACAAGGTTACTGAGGGGAGTCGGGTTATAGGTGATCCCGCTGCCAGAGCGG
TGAACAATGGGTGGGCAGCAGGGAGGCTCGCCTCAACGGTTGCTGGTGAAGAGAATTTCA
TTTTCAGCTCTAACAGCGTTCTTAGGCAATAATCCTACCCTGCAATTTGGCTTTGTAATG
ATGAATAACGATCCTATAGATCCAATAGATCACACCATCCCACAGGAGTTTTTGCAGTAA
CAGCCTAACAGGCTAACAGCAAAGTTCTTGTATACAACTGCTCAAAGATTATTTTCAAAA
ATTTCGCCTTCTTTTATG