Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0315800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:11351502:11355720:-1 gene:Os03g0315800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 30S ribosomal protein S1, chloroplast precursor (CS1). (Os03t0315800-01);Similar to 30S ribosomal protein S1 (Fragment). (Os03t0315800-02)
Sequence	GCCGAGAGCGCGAATGGCGTCCCTGGCGCAGCACGTCGCGGGGCTGGCGAGCCCGCCGCT CTGGTGTGCGGGACGTACGCGCTCACCAAGGAGGAGCGGGAGCGGGAGCGGATGTGCCAG CTGTTCGACGAGGCCTCCGAGCGCTGCCGCACCGCGCCCATGGAGGGCGTCTCCTTCTCG CCCGAGGACCTCGACTCCGCCGTCGAGTCCACCGACATCGACACCGATATCGGCTCACTC ATTAAAGGAACAGTGTTCATGACCACTTCAAATGGTGCATATGTTGATATCCAATCGAAG TCTACTGCTTTCTTGCCTTTGGATGAGGCATGCCTTCTCGATGTCAACCATATAGAAGAG GCAGGGATCCGTGCAGGTTTGGTAGAAGAGTTCATGATTATTGACGAGAATCCTGGTGAT GAAACTTTGATTTTGAGCTTACAAGCAATTCAGCAAGACCTTGCCTGGGAAAGGTGCAGA CAGCTTCAAGCAGAAGATGTTGTTGTCACGGGTAAAGTAATTGGTGGAAACAAAGGAGGT GTGGTAGCTCTTGTGGAGGGCCTTAAGGGATTTGTTCCATTTTCACAAGTGTCATCGAAA TCAACTGCTGAAGAACTGCTTGACAAAGAACTACCTCTGAAGTTTGTGGAGGTCGATGAG GAACAAGGCAGGCTTGTCCTCAGTAACCGCAAGGCAATGGCAGATAGTCAAGCTCAGCTT GGTATTGGTTCAGTTGTCTTGGGAACTGTCGAGAGCCTGAAACCTTATGGTGCATTTATC GACATTGGTGGAATCAATGGCCTTCTCCATGTCAGCCAGATTAGTCATGACCGTGTTGCG GACATCTCGACAGTTCTGCAACCAGGAGATACGCTCAAGGTTATGATTCTAAGCCATGAC CGTGAAAGAGGCCGTGTTAGTCTTTCTACTAAAAAGCTTGAGCCGACACCTGGTGACATG ATTCGCAATCCAAAGCTTGTTTTTGAGAAGGCTGATGAGATGGCTCAGATATTCAGGCAG AGGATAGCTCAAGCAGAGGCAATGGCTCGTGCTGATATGTTAAGATTCCAGCCTGAGAGT GGATTAACTCTCAGTTCAGAGGGCATCTTAGGGCCATTATCATCAGACACACCTTCTGAG GGCTCGGGAGAAGGGCAAACCACAGATGAATAG

Peptide Sequence

PEP ID	Os03t0315800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:11351502:11355720:-1 gene:Os03g0315800 transcript:Os03t0315800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 30S ribosomal protein S1, chloroplast precursor (CS1). (Os03t0315800-01);Similar to 30S ribosomal protein S1 (Fragment). (Os03t0315800-02)
Sequence	AESANGVPGAARRGAGEPAALVCGTYALTKEERERERMCQLFDEASERCRTAPMEGVSFS PEDLDSAVESTDIDTDIGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVNHIEE AGIRAGLVEEFMIIDENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGG VVALVEGLKGFVPFSQVSSKSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQAQL GIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHD RERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQAEAMARADMLRFQPES GLTLSSEGILGPLSSDTPSEGSGEGQTTDE

Transcript Sequence

Transcript ID	Os03t0315800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:11351502:11355720:-1 gene:Os03g0315800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 30S ribosomal protein S1, chloroplast precursor (CS1). (Os03t0315800-01);Similar to 30S ribosomal protein S1 (Fragment). (Os03t0315800-02)
Sequence	CCCGAAGCACCACACCACAACCACAACACACCACAGCGGGTAGGCCGAGAGCGCGAATGG CGTCCCTGGCGCAGCACGTCGCGGGGCTGGCGAGCCCGCCGCTCTGGTGTGCGGGACGTA CGCGCTCACCAAGGAGGAGCGGGAGCGGGAGCGGATGTGCCAGCTGTTCGACGAGGCCTC CGAGCGCTGCCGCACCGCGCCCATGGAGGGCGTCTCCTTCTCGCCCGAGGACCTCGACTC CGCCGTCGAGTCCACCGACATCGACACCGATATCGGCTCACTCATTAAAGGAACAGTGTT CATGACCACTTCAAATGGTGCATATGTTGATATCCAATCGAAGTCTACTGCTTTCTTGCC TTTGGATGAGGCATGCCTTCTCGATGTCAACCATATAGAAGAGGCAGGGATCCGTGCAGG TTTGGTAGAAGAGTTCATGATTATTGACGAGAATCCTGGTGATGAAACTTTGATTTTGAG CTTACAAGCAATTCAGCAAGACCTTGCCTGGGAAAGGTGCAGACAGCTTCAAGCAGAAGA TGTTGTTGTCACGGGTAAAGTAATTGGTGGAAACAAAGGAGGTGTGGTAGCTCTTGTGGA GGGCCTTAAGGGATTTGTTCCATTTTCACAAGTGTCATCGAAATCAACTGCTGAAGAACT GCTTGACAAAGAACTACCTCTGAAGTTTGTGGAGGTCGATGAGGAACAAGGCAGGCTTGT CCTCAGTAACCGCAAGGCAATGGCAGATAGTCAAGCTCAGCTTGGTATTGGTTCAGTTGT CTTGGGAACTGTCGAGAGCCTGAAACCTTATGGTGCATTTATCGACATTGGTGGAATCAA TGGCCTTCTCCATGTCAGCCAGATTAGTCATGACCGTGTTGCGGACATCTCGACAGTTCT GCAACCAGGAGATACGCTCAAGGTTATGATTCTAAGCCATGACCGTGAAAGAGGCCGTGT TAGTCTTTCTACTAAAAAGCTTGAGCCGACACCTGGTGACATGATTCGCAATCCAAAGCT TGTTTTTGAGAAGGCTGATGAGATGGCTCAGATATTCAGGCAGAGGATAGCTCAAGCAGA GGCAATGGCTCGTGCTGATATGTTAAGATTCCAGCCTGAGAGTGGATTAACTCTCAGTTC AGAGGGCATCTTAGGGCCATTATCATCAGACACACCTTCTGAGGGCTCGGGAGAAGGGCA AACCACAGATGAATAGCTTCAATAGGAAGATTACGTCTGAGTAGAAAGCTGTGATGGTAG CTCATCAACTCATTTTCCCACGATCTAAAAGGCATGAAGAAGACCTATTGTATTCCAACC ATTTCCCATCTTCGATCTGTGCTTGTATCAATCAATGTGTATGAAAGTAAAGTTACTGAA AGAAATGGATGTTGCTTCCCTGTTGTAAAGTTGTCC