Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0314500-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:11267873:11270046:1 gene:Os03g0314500 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40-like Beta Propeller domain containing protein. (Os03t0314500-01);Hypothetical conserved gene. (Os03t0314500-02)
Sequence

GTGGCTTCGTACCAAGGGAAGAAATGGGACGGTGAGATCAAGAACCTCAACACCAACATC
TACGTGATGAGCTTGGAGAACCCGTCTCAGGATCGCGAGCGGGTGATCGAGAACGGCGGC
TGGCCGTCGTGGGGCAGCGAGGACGTGATCTTCTTCCACAGGAAGGACGGCGACGGGGAG
AACAGCTGCTGGGGCGTGTTCCGGCACACCCTGAGCACCGGCGAGACCGTCCGGGTGACG
CCGGCGGCGTTCGACTCGGTGACTCCGGCGGCCATCGACGAGACCAGGGTGGCGGTGGCG
GCCATCCGCCAGAAGTCCGAGTTCAGTGATGTCCGCGTCGAGGCACAGTACAGGCACATC
GAGGTGTTCGACATGAGATCGCCGGAGCAGCCGATGCAGATCACCCGGAACACCAGGCCA
AAGGCCGACCATTTCAACCCCTTCGTGATGGACGGTGGCAAGTTCATTGGTTACCACCGT
TGCAAAAGCGAGCTCCTCCAGCACGGCGATGATCTCCCGAGAAAATTTCACAAGCTGCAA
TCCCCACACGAAGATGTCGGTGTGTTCAGGGTGTCCGGTGTGTTCCCAACATTTTCCAAA
GATGGTTCTCAGCTTGCCTTCGTTGACAACGAGTTCAAATCCGTGTGGCTGGCCGATAGC
CAAGGGATGCGTGTCGTCTTCAAGACTGATGGCCCAGACAGCGTCTTCTCACCGCTGTGG
AATTCCAAGAAGGATATACTCTATGTGTGCATGGGACCTTCTTTCAAAGCCAGTGAAACG
TTGGAGATCCATTCCATACACAATGTATCCACTGGTGACCGGAAGTCGCGGCAGCTCACG
TTCGGAGGATTCAACAACGCCTTCCCTTCCACCAATCCAGACGGAACGAAATTTGTTTTC
CGGTCGACAAGAGATGGAGGGGCAAAGTACAGCAAGAACCTGTACATAATGGAGGACGCC
GACGCCGGAGAAGGCGAGGATGGCAGCCAGTCGACGGTGACGCGGATGACCGCCGGCGAG
TGGACGGACACGCACTGCCAGTGGTCTCCGAACGGGAAGTGGATCGTGTTCTCGTCGAAC
CGGGACAGGCCGGCGGACGCGCCGGAGCGCGACCACGGCCTCGACCCGGGCTACTTCGCC
GTCTACCTGATGGACGTGGCGTCCCGGTCGGTGGTGAGGGTGATCAGGAGCGGGTACGAC
GTCGCCGGGCACGTGAACCACCCGGTGTTCAGCCCGGACGGGCGGAGCATCGCGGTGACG
TCCGACCTCGCCGCGGTGACCGCCGACCCGATGTCGCTGCCGCTCTTCCTGCACTCCGTC
AGGCCCTACGGCGACATCTTCACCGTGGACATCGACCCGGACGACATGGCGAGGAACGAG
GACGTGGAGGGGTTCGTCCGCGTCACGCACAGCCGGTACGAGAACTCCACGCCGGCGTGG
ACCGTGTTCTCCACGCACGACCCGCACGCGCAGTGGAACCTCCTCGTCGTGGAGGACGAG
CACGTCCCGTCGTGCCCGTACGCGCATCCGGACGGAGGCGAGAGTTGGCACATGACCGGC
CAGATTTGCATCCCCAAAAGGCACTGTTAA

Peptide Sequence

PEP ID

Os03t0314500-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:11267873:11270046:1 gene:Os03g0314500 transcript:Os03t0314500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40-like Beta Propeller domain containing protein. (Os03t0314500-01);Hypothetical conserved gene. (Os03t0314500-02)
Sequence

VASYQGKKWDGEIKNLNTNIYVMSLENPSQDRERVIENGGWPSWGSEDVIFFHRKDGDGE
NSCWGVFRHTLSTGETVRVTPAAFDSVTPAAIDETRVAVAAIRQKSEFSDVRVEAQYRHI
EVFDMRSPEQPMQITRNTRPKADHFNPFVMDGGKFIGYHRCKSELLQHGDDLPRKFHKLQ
SPHEDVGVFRVSGVFPTFSKDGSQLAFVDNEFKSVWLADSQGMRVVFKTDGPDSVFSPLW
NSKKDILYVCMGPSFKASETLEIHSIHNVSTGDRKSRQLTFGGFNNAFPSTNPDGTKFVF
RSTRDGGAKYSKNLYIMEDADAGEGEDGSQSTVTRMTAGEWTDTHCQWSPNGKWIVFSSN
RDRPADAPERDHGLDPGYFAVYLMDVASRSVVRVIRSGYDVAGHVNHPVFSPDGRSIAVT
SDLAAVTADPMSLPLFLHSVRPYGDIFTVDIDPDDMARNEDVEGFVRVTHSRYENSTPAW
TVFSTHDPHAQWNLLVVEDEHVPSCPYAHPDGGESWHMTGQICIPKRHC

Transcript Sequence

Transcript ID

Os03t0314500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:11267873:11270046:1 gene:Os03g0314500 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40-like Beta Propeller domain containing protein. (Os03t0314500-01);Hypothetical conserved gene. (Os03t0314500-02)
Sequence

GTGGCTTCGTACCAAGGGAAGAAATGGGACGGTGAGATCAAGAACCTCAACACCAACATC
TACGTGATGAGCTTGGAGAACCCGTCTCAGGATCGCGAGCGGGTGATCGAGAACGGCGGC
TGGCCGTCGTGGGGCAGCGAGGACGTGATCTTCTTCCACAGGAAGGACGGCGACGGGGAG
AACAGCTGCTGGGGCGTGTTCCGGCACACCCTGAGCACCGGCGAGACCGTCCGGGTGACG
CCGGCGGCGTTCGACTCGGTGACTCCGGCGGCCATCGACGAGACCAGGGTGGCGGTGGCG
GCCATCCGCCAGAAGTCCGAGTTCAGTGATGTCCGCGTCGAGGCACAGTACAGGCACATC
GAGGTGTTCGACATGAGATCGCCGGAGCAGCCGATGCAGATCACCCGGAACACCAGGCCA
AAGGCCGACCATTTCAACCCCTTCGTGATGGACGGTGGCAAGTTCATTGGTTACCACCGT
TGCAAAAGCGAGCTCCTCCAGCACGGCGATGATCTCCCGAGAAAATTTCACAAGCTGCAA
TCCCCACACGAAGATGTCGGTGTGTTCAGGGTGTCCGGTGTGTTCCCAACATTTTCCAAA
GATGGTTCTCAGCTTGCCTTCGTTGACAACGAGTTCAAATCCGTGTGGCTGGCCGATAGC
CAAGGGATGCGTGTCGTCTTCAAGACTGATGGCCCAGACAGCGTCTTCTCACCGCTGTGG
AATTCCAAGAAGGATATACTCTATGTGTGCATGGGACCTTCTTTCAAAGCCAGTGAAACG
TTGGAGATCCATTCCATACACAATGTATCCACTGGTGACCGGAAGTCGCGGCAGCTCACG
TTCGGAGGATTCAACAACGCCTTCCCTTCCACCAATCCAGACGGAACGAAATTTGTTTTC
CGGTCGACAAGAGATGGAGGGGCAAAGTACAGCAAGAACCTGTACATAATGGAGGACGCC
GACGCCGGAGAAGGCGAGGATGGCAGCCAGTCGACGGTGACGCGGATGACCGCCGGCGAG
TGGACGGACACGCACTGCCAGTGGTCTCCGAACGGGAAGTGGATCGTGTTCTCGTCGAAC
CGGGACAGGCCGGCGGACGCGCCGGAGCGCGACCACGGCCTCGACCCGGGCTACTTCGCC
GTCTACCTGATGGACGTGGCGTCCCGGTCGGTGGTGAGGGTGATCAGGAGCGGGTACGAC
GTCGCCGGGCACGTGAACCACCCGGTGTTCAGCCCGGACGGGCGGAGCATCGCGGTGACG
TCCGACCTCGCCGCGGTGACCGCCGACCCGATGTCGCTGCCGCTCTTCCTGCACTCCGTC
AGGCCCTACGGCGACATCTTCACCGTGGACATCGACCCGGACGACATGGCGAGGAACGAG
GACGTGGAGGGGTTCGTCCGCGTCACGCACAGCCGGTACGAGAACTCCACGCCGGCGTGG
ACCGTGTTCTCCACGCACGACCCGCACGCGCAGTGGAACCTCCTCGTCGTGGAGGACGAG
CACGTCCCGTCGTGCCCGTACGCGCATCCGGACGGAGGCGAGAGTTGGCACATGACCGGC
CAGATTTGCATCCCCAAAAGGCACTGTTAATTCTCTCGCCATTGCATTACTACGTTTCTT
GTTTAGAAGCGTTGTTGTTTGTTTAACGTACGATATTTATTATCTGAAGACGTTTTCAGC
ATTTGCTTGGATGTACAACGTGTGTATGAACTGTTTGCGATGTAATATTTGTTTATTTGC
TTGAGATGTACTTTTTTCTTGTC