Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0314400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:11252342:11255305:1 gene:Os03g0314400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0314400-01)
Sequence	ATGCTCACGGTGACCCTCCTGGACGCGCACCTCGCGCGGTGCAGCTCGGCGCGCCACCTC CTCCAGATCCACGCCCAGTTCGTCGCGTCCGGTCTCCTCGCCGACGCCTTCGCCGCCAGC CGCCTCATCCTCTTCACCACCTCCACCCGCCTCCTCCCGCTCCCGTTCCACCACTCGCTC CGCCTCCTCCACGTCGTCCACCGCCCCAACGCCTTCTCCTGCAACATGGTCCTCAAGGCG GCCCGCGAGCATGGGCTGCCGCACCTGTGCCTCCCGCTCTACGCGTCCATGTCCGCGGCC CCCGACTGCTACACCCATACCATCCTCGCCGCCGCCTGCGCCACCAGGAGGGCCATCGAA GAAGGCCGCCAGGTGCACTGCCACGCCGTCAGGCACGGGTTCGGGCGCAACCTGTACCTC GCGAACGCGCTGATGAGTATGTACTCCGCGTGTGGGTGCCTCGGCGACGCGCGCAAGGTG TTCGACGCGGGTCCTGTTTGGGACGCCGTTTCTTGGAACACGATCCTGGCCGCGTACGTG CAGGCTGAGGATGTGGACCAGGCGGTTGGGGTGTTTGCACGGATGCCTGAACGGGGTGCT GCGGCGGTGAGTTCGATGGTGTCGCTGTTTGGGAGGAGAGGAATGGTGGACGAGGCGAGG AAGGTGTTTGATGTGGTGGAGCGCAAGGATGTTTTCACGTGGACTGCGATGATTTCTTGC TTTCAGCGGAATGGCAAGTTTGCAGAGGCGTTGGCTTTGTTCTCAGATATGCGTGGGGAG GGGTGGCCTGTGGATGAGGCAGTCATGGTCTGTGTTGTCGCTGCCTGTGCACGGTTGGAG GTAACTCGGAATGGGGAGATGTGTCATGGGCTGGCTTTCAGAGCTGGCCTTGGCTCGAGG TTGAACGTCCAGAACGCATTGATCCACATGTACTCAAGTTTTCTGAATGTTGTTGCGGCA CGAAGATTGTTTGACAGTGGCCAGTGTTTGGACCAGTTCTCTTGGAACTCGATGATAGCT GGCTATCTTAAGAATGGCTCTGTCAAGGATGCAAAGGAATTGTTCACTGTAATGCCTGAC AAAGATAATGTTTCTTGGACTACAATGATATCTGGTTGTGTGCAAAATGACCAGTCCTCA GAGGCACTCACTATTTTCAACAACATGCAAGCCCAAGGAATCAAGCCAGATGAGGTTACG CTTGTAAGCGTCATCTCTGCATGTACTAATATGTCTTCTCTCGAGCAAGGCAAGTCAATG CATGAGTACATAAGGGAACACCAATATACCATCACAGTCATACTTGGGACTAGCCTCATT GACATGTACATGAAGTGTGGGTGCTTAGAATCTGCATTAGAAGTCTTCGATACAATGGAA GAAAGAGGAACACCTTGCTGGAATGCTGTCATTGTGGGGCTGGCCATGAATGGTCTGGTG ATGAAGTCCCTTGACATGTTTTCGGAGATGGAATCATCTAGCACTGCCACTCCAAATGAG ATAACTTTCACTGGAGTTTTGAGTGCTTGCAGACATGCTGGCCTAGTTGAGGAGGGCCAA CATTTCTTCAAGTTGATGCAGCACAAGTATCACATTATCCCAAACATCAGACATTATGGA TGCATGGTGGATCTTCTTGGACGTGCTGGATATGTCAAAGAGGCAGAGAATCTGATTGAG AGCATGCCCATGTCACCAGATGTTCCAGCATGGGGTGCTTTGCTTGGTTCCTGCTGGAAA CATGGTGATAATGAGGTTGGAGAAAGGGTGGGGAGGAAGCTTGTCAATCTAGATCCTCAC CATGACGGGTTCCACACTATGCTATCTAACATATATGCTTCAGAAGGAATGTGGCAACAT GTAAAGGACCTAAGGGGCTCCATGAAACAATGGCATGTCCCAAAAATTCCTGGTTCTAGT GTGGTTGAATCATCACTACCTTTGTGA

Peptide Sequence

PEP ID	Os03t0314400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:11252342:11255305:1 gene:Os03g0314400 transcript:Os03t0314400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0314400-01)
Sequence	MLTVTLLDAHLARCSSARHLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSL RLLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASMSAAPDCYTHTILAAACATRRAIE EGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYV QAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISC FQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSR LNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPD KDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSM HEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLV MKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYG CMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPH HDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVESSLPL

Transcript Sequence

Transcript ID	Os03t0314400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:11252342:11255305:1 gene:Os03g0314400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0314400-01)
Sequence	GCCCCGCGGGCTCTCGTCCCAACCGCTCACCGGCTTCCCGCGGCGGCGGCGGCGGGGCTC CATGCTCACGGTGACCCTCCTGGACGCGCACCTCGCGCGGTGCAGCTCGGCGCGCCACCT CCTCCAGATCCACGCCCAGTTCGTCGCGTCCGGTCTCCTCGCCGACGCCTTCGCCGCCAG CCGCCTCATCCTCTTCACCACCTCCACCCGCCTCCTCCCGCTCCCGTTCCACCACTCGCT CCGCCTCCTCCACGTCGTCCACCGCCCCAACGCCTTCTCCTGCAACATGGTCCTCAAGGC GGCCCGCGAGCATGGGCTGCCGCACCTGTGCCTCCCGCTCTACGCGTCCATGTCCGCGGC CCCCGACTGCTACACCCATACCATCCTCGCCGCCGCCTGCGCCACCAGGAGGGCCATCGA AGAAGGCCGCCAGGTGCACTGCCACGCCGTCAGGCACGGGTTCGGGCGCAACCTGTACCT CGCGAACGCGCTGATGAGTATGTACTCCGCGTGTGGGTGCCTCGGCGACGCGCGCAAGGT GTTCGACGCGGGTCCTGTTTGGGACGCCGTTTCTTGGAACACGATCCTGGCCGCGTACGT GCAGGCTGAGGATGTGGACCAGGCGGTTGGGGTGTTTGCACGGATGCCTGAACGGGGTGC TGCGGCGGTGAGTTCGATGGTGTCGCTGTTTGGGAGGAGAGGAATGGTGGACGAGGCGAG GAAGGTGTTTGATGTGGTGGAGCGCAAGGATGTTTTCACGTGGACTGCGATGATTTCTTG CTTTCAGCGGAATGGCAAGTTTGCAGAGGCGTTGGCTTTGTTCTCAGATATGCGTGGGGA GGGGTGGCCTGTGGATGAGGCAGTCATGGTCTGTGTTGTCGCTGCCTGTGCACGGTTGGA GGTAACTCGGAATGGGGAGATGTGTCATGGGCTGGCTTTCAGAGCTGGCCTTGGCTCGAG GTTGAACGTCCAGAACGCATTGATCCACATGTACTCAAGTTTTCTGAATGTTGTTGCGGC ACGAAGATTGTTTGACAGTGGCCAGTGTTTGGACCAGTTCTCTTGGAACTCGATGATAGC TGGCTATCTTAAGAATGGCTCTGTCAAGGATGCAAAGGAATTGTTCACTGTAATGCCTGA CAAAGATAATGTTTCTTGGACTACAATGATATCTGGTTGTGTGCAAAATGACCAGTCCTC AGAGGCACTCACTATTTTCAACAACATGCAAGCCCAAGGAATCAAGCCAGATGAGGTTAC GCTTGTAAGCGTCATCTCTGCATGTACTAATATGTCTTCTCTCGAGCAAGGCAAGTCAAT GCATGAGTACATAAGGGAACACCAATATACCATCACAGTCATACTTGGGACTAGCCTCAT TGACATGTACATGAAGTGTGGGTGCTTAGAATCTGCATTAGAAGTCTTCGATACAATGGA AGAAAGAGGAACACCTTGCTGGAATGCTGTCATTGTGGGGCTGGCCATGAATGGTCTGGT GATGAAGTCCCTTGACATGTTTTCGGAGATGGAATCATCTAGCACTGCCACTCCAAATGA GATAACTTTCACTGGAGTTTTGAGTGCTTGCAGACATGCTGGCCTAGTTGAGGAGGGCCA ACATTTCTTCAAGTTGATGCAGCACAAGTATCACATTATCCCAAACATCAGACATTATGG ATGCATGGTGGATCTTCTTGGACGTGCTGGATATGTCAAAGAGGCAGAGAATCTGATTGA GAGCATGCCCATGTCACCAGATGTTCCAGCATGGGGTGCTTTGCTTGGTTCCTGCTGGAA ACATGGTGATAATGAGGTTGGAGAAAGGGTGGGGAGGAAGCTTGTCAATCTAGATCCTCA CCATGACGGGTTCCACACTATGCTATCTAACATATATGCTTCAGAAGGAATGTGGCAACA TGTAAAGGACCTAAGGGGCTCCATGAAACAATGGCATGTCCCAAAAATTCCTGGTTCTAG TGTGGTTGAATCATCACTACCTTTGTGAGAATATATCATATGATGGTACTTGAAATCAGA ATACAGTGCTTAGAGTGGTTTGACTCAAGTTTCATAAGGCATGGAGCACATGAGAGTGAG GGTGGTCTACTTCACCAAATTAAGGAGAGTAACTGTCTGTTTATATGAATATATCAGGGA GCTTGGTGAAGGGAGGAGGGAAGAATAAGGAAGCAAGGATGGCCTGTTATTTATAGTTAG CAGATGACAGATTAACGCAGGCAGACTACCCAAGCTCCTAAATGGTACGATTTTTGCAAA AAACTTTCTTCATCAACATTTCTTAGATAACTTGTTTAAATCAACTTCCAATATTTAATT ATGCCCTCGAATAATTGTCATGAACTCTGTGTCATCCATCACCCATCATCTATTTAGGGT GGGATCTTAAGGGGTGCAATAAGCTTGCAACCTTTATTGGTATGTTTAGCTTTGTCGTTG GAAGTTTTGAAGTTGGGACAACATGTTATCACACTTATTGCACTGGAAAACAATAAAGAG AAGATCTGTAGATGTTTTTTTTTCCAT