Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0313000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:11181026:11183927:1 gene:Os03g0313000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NADH-ubiquinone oxidoreductase (Fragment). (Os03t0313000-01)
Sequence

ATGTTCCTGCGGCGGATCCTGAGCGGCGGGGGAGGGGTGGCGGCGCTGCGGGCGGCGCGC
GCCGTGAAGGAGACGACGGGGATCGTGGGGCTGGAGGTGGTGCCCAACGCGCGGGAGGTG
CTCGTCGGCCTCTACACCCGCACCCTCAAGGAGATCGAGGCCGTCCCCAAGGACGAGGGC
TACCGCAAGGCCGTCGAGTCCTTCACCCGCCACCGCCTCCAGATCTGCCAGGAGGAGGAC
GACTGGAAGCGCATCGAGGACCGCATCGGCTGCGGCCAGGTCGAGGAGCTCATCGAGGAG
GCCCAGGACGAGCTCAAGCTCATCGCCAAGATGATCGAATGGGACCCATGGGGTGTTCCT
GATGACTATGAATGCGAGGTTATTGAAGATGACACACTTATCCCGAAACATGTTCCGCAG
CATCGGCCTGTTGCACTCCCTGAGGAGTTCTTCAAGACACTAGATGCTGTCAAATCTGAT
CCTGCTCTGCAGGGTGAGTCTCCTCCTCAAGTGAAACCATAA

Peptide Sequence

PEP ID

Os03t0313000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:11181026:11183927:1 gene:Os03g0313000 transcript:Os03t0313000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NADH-ubiquinone oxidoreductase (Fragment). (Os03t0313000-01)
Sequence

MFLRRILSGGGGVAALRAARAVKETTGIVGLEVVPNAREVLVGLYTRTLKEIEAVPKDEG
YRKAVESFTRHRLQICQEEDDWKRIEDRIGCGQVEELIEEAQDELKLIAKMIEWDPWGVP
DDYECEVIEDDTLIPKHVPQHRPVALPEEFFKTLDAVKSDPALQGESPPQVKP

Transcript Sequence

Transcript ID

Os03t0313000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:11181026:11183927:1 gene:Os03g0313000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NADH-ubiquinone oxidoreductase (Fragment). (Os03t0313000-01)
Sequence

TCAGTCGCACGTACCACACCAGCATCCTCGCACGGTCGCGACCCCTCCCGCACCTCACCA
GGTAGAGAGAGAGACGACGGCGGTGGTGGCGGGATGTTCCTGCGGCGGATCCTGAGCGGC
GGGGGAGGGGTGGCGGCGCTGCGGGCGGCGCGCGCCGTGAAGGAGACGACGGGGATCGTG
GGGCTGGAGGTGGTGCCCAACGCGCGGGAGGTGCTCGTCGGCCTCTACACCCGCACCCTC
AAGGAGATCGAGGCCGTCCCCAAGGACGAGGGCTACCGCAAGGCCGTCGAGTCCTTCACC
CGCCACCGCCTCCAGATCTGCCAGGAGGAGGACGACTGGAAGCGCATCGAGGACCGCATC
GGCTGCGGCCAGGTCGAGGAGCTCATCGAGGAGGCCCAGGACGAGCTCAAGCTCATCGCC
AAGATGATCGAATGGGACCCATGGGGTGTTCCTGATGACTATGAATGCGAGGTTATTGAA
GATGACACACTTATCCCGAAACATGTTCCGCAGCATCGGCCTGTTGCACTCCCTGAGGAG
TTCTTCAAGACACTAGATGCTGTCAAATCTGATCCTGCTCTGCAGGGTGAGTCTCCTCCT
CAAGTGAAACCATAAAGACGTGAACTCTCCAAGATCTACCATTTGCACCATTTTGCTGCG
TGGAGTAGACTATAGATTAGTTTCATGTGTTCTTTGCCAGCAATATTTGCTTGGTTGTTC
CAAGCAGAATAAAGTTCTACCGAGCACTACAAAGAATGTGTTTAAACTGAGTGCTTCCAC
ACAGTGAAATGTGTGATATTTGATACTGTGGACATCATTTTCTTTTTCTCTGTATTAATC
TATGGTGACGAAAAGCAAACGTTTTACTGTT