Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0312600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:11171645:11174607:1 gene:Os03g0312600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to XPA-binding protein 1 (HUSSY-23). (Os03t0312600-01);Similar to XPA-binding protein 1. (Os03t0312600-02);Non-protein coding transcript. (Os03t0312600-03)
Sequence	ATGGACGTCGACTCCGACCCAGCCGCCGCGGGCAAGCCCACCCAGATGGACCTCGAGGAC CAGACTGACGCGAAGGGGAAGGGGAAGAGCGAGGAGCTCGCGGACTCCATCGGGAGCCTC TCCATCGGCCCGGAGCGCACCAATTTCAAGAAGAAGCCGGTGATCATCATCGTCATCGGC ATGGCCGGGACGGGGAAGACAACTTTTATGCACCGACTGGTATGCCACACCCAGGCTTCA AACATGAGGGGTTATGTGCTCAACCTTGACCCTGCGGTGATGACGCTGCCGTTTGGGGCC AACATAGATATCCGTGATACCGTTCGGTACAAGGAGGTGATGAAGGAGTATGGTCTTGGC CCCAATGGCGGTATCCTCACCTCTCTCAACCTATTCTCCACCAAGTTTGACGAGGTTATA TCTGTTATTGAAAGACGAGCCGACCAGCTGGATTATGTCCTGGTGGACACGCCAGGGCAG ATTGAAATCTTCACTTGGTCGGCTTCAGGAGCTATCATAACAGAAGCTTTTGCATCGACA TTTCCAACAGTTGTCGCATATGTTGTTGACACCCCCAGATCAACGAGCCCTGTTACTTTC ATGAGCAACATGCTTTATGCCTGCAGTATTCTGTACAAGACCCGCTTACCGATGATTCTG ACATTTAATAAGGTTGATGTTGCCAAGCATGAGTTTGCTCTTGAGTGGATGGAAGACTTT GAGGCGTTTCAGACCGCCTTGGATTCTGACTCATCATACTCCTCTACATTTACCCGAAGC CTCTCTCTTGTCCTGGATGAGTTTTACAAAAATCTGCGGTCTGTTGGAGTATCTGCCGTA TCTGGCGCTGGAGTCAATTCATTTTTTGAAGCTATTGAAGCAAGTGCCAAAGAATACATG GAGAATTACAGGGCTGATCTTGACAAGAGGATTGCTGAAAAAGAGAGGTTAGAGGCTGAG CGTAGGAAGGAGAACATGGAAAGGTTGCAAAGAGACATGGAAAACTCTAAAGGACAGACT GTTGTGCTCAGCACTGGTTTGAAGGACAAAAATCGTGCTACGGATATGATGGATGATGCT GATGAGGAGGAAGAGGAGGCGGCATTAGAAGATTTCAGGATTTCTGAGGATGATGAGGAT GAGGATGAGGATGAAGGGGAAGATGAAGAAGTGGAGCATTTTGGCTTATAA

Peptide Sequence

PEP ID	Os03t0312600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:11171645:11174607:1 gene:Os03g0312600 transcript:Os03t0312600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to XPA-binding protein 1 (HUSSY-23). (Os03t0312600-01);Similar to XPA-binding protein 1. (Os03t0312600-02);Non-protein coding transcript. (Os03t0312600-03)
Sequence	MDVDSDPAAAGKPTQMDLEDQTDAKGKGKSEELADSIGSLSIGPERTNFKKKPVIIIVIG MAGTGKTTFMHRLVCHTQASNMRGYVLNLDPAVMTLPFGANIDIRDTVRYKEVMKEYGLG PNGGILTSLNLFSTKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFAST FPTVVAYVVDTPRSTSPVTFMSNMLYACSILYKTRLPMILTFNKVDVAKHEFALEWMEDF EAFQTALDSDSSYSSTFTRSLSLVLDEFYKNLRSVGVSAVSGAGVNSFFEAIEASAKEYM ENYRADLDKRIAEKERLEAERRKENMERLQRDMENSKGQTVVLSTGLKDKNRATDMMDDA DEEEEEAALEDFRISEDDEDEDEDEGEDEEVEHFGL

Transcript Sequence

Transcript ID	Os03t0312600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:11171645:11174607:1 gene:Os03g0312600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to XPA-binding protein 1 (HUSSY-23). (Os03t0312600-01);Similar to XPA-binding protein 1. (Os03t0312600-02);Non-protein coding transcript. (Os03t0312600-03)
Sequence	ATCTCCCTTCCCATCCACGTTCGGCCACTTCCTCCTTTCTCAAGCTCTCTCTCCTCTCCT CGCAGTCGCAGCGCAGTAGTCTCTAGGGTTTTAGCGGGCGGTTGTCCTCCACCCGCTCGC CGCGTGGCCGCCGCCTTCTCCCCGCGCCACCGCCGATGGACGTCGACTCCGACCCAGCCG CCGCGGGCAAGCCCACCCAGATGGACCTCGAGGACCAGACTGACGCGAAGGGGAAGGGGA AGAGCGAGGAGCTCGCGGACTCCATCGGGAGCCTCTCCATCGGCCCGGAGCGCACCAATT TCAAGAAGAAGCCGGTGATCATCATCGTCATCGGCATGGCCGGGACGGGGAAGACAACTT TTATGCACCGACTGGTATGCCACACCCAGGCTTCAAACATGAGGGGTTATGTGCTCAACC TTGACCCTGCGGTGATGACGCTGCCGTTTGGGGCCAACATAGATATCCGTGATACCGTTC GGTACAAGGAGGTGATGAAGGAGTATGGTCTTGGCCCCAATGGCGGTATCCTCACCTCTC TCAACCTATTCTCCACCAAGTTTGACGAGGTTATATCTGTTATTGAAAGACGAGCCGACC AGCTGGATTATGTCCTGGTGGACACGCCAGGGCAGATTGAAATCTTCACTTGGTCGGCTT CAGGAGCTATCATAACAGAAGCTTTTGCATCGACATTTCCAACAGTTGTCGCATATGTTG TTGACACCCCCAGATCAACGAGCCCTGTTACTTTCATGAGCAACATGCTTTATGCCTGCA GTATTCTGTACAAGACCCGCTTACCGATGATTCTGACATTTAATAAGGTTGATGTTGCCA AGCATGAGTTTGCTCTTGAGTGGATGGAAGACTTTGAGGCGTTTCAGACCGCCTTGGATT CTGACTCATCATACTCCTCTACATTTACCCGAAGCCTCTCTCTTGTCCTGGATGAGTTTT ACAAAAATCTGCGGTCTGTTGGAGTATCTGCCGTATCTGGCGCTGGAGTCAATTCATTTT TTGAAGCTATTGAAGCAAGTGCCAAAGAATACATGGAGAATTACAGGGCTGATCTTGACA AGAGGATTGCTGAAAAAGAGAGGTTAGAGGCTGAGCGTAGGAAGGAGAACATGGAAAGGT TGCAAAGAGACATGGAAAACTCTAAAGGACAGACTGTTGTGCTCAGCACTGGTTTGAAGG ACAAAAATCGTGCTACGGATATGATGGATGATGCTGATGAGGAGGAAGAGGAGGCGGCAT TAGAAGATTTCAGGATTTCTGAGGATGATGAGGATGAGGATGAGGATGAAGGGGAAGATG AAGAAGTGGAGCATTTTGGCTTATAAGGTATTAAAATATTGCTCCGCTGGAATCTGAGTT ACCCTAATGTACTCACTTGCAGAGCTCTATTAAATTTATTAATCTGAGTATGGTGTTTCT CTGTTCCAGATACTTGAATGTCATTTTGCTTTGAATGTTAATCGCTGTTACTATCTAGTT ATTCATTTGAACCT