Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0309400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:11033522:11035542:-1 gene:Os03g0309400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 1 description:Pectin lyase fold domain containing protein. (Os03t0309400-01)
Sequence	ATGGCCCGGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGGCGGTGCTCTCG TCGCCGCTCGGCCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGC CCACTGCTCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAG TTCAAGACCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATC GTCCACCTCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTC ATCTTCGTGAGGGGCAACGGCAAGGGCCGGACCTCAATCAACCACGAGTCCGCTTCCTCC CACAACGCCGAGTCTGCCGCCTTCACCGTGCACGCGGACAACGTCATCGTCTTCGGCCTC AGCATCAGGAACAGCGCGCGCGCCGGGCTGCCCAACGTCCCGGAGGTGCGCACGGTGGCC GCCATGGTCGGCGGCGACAAGATTGCCTTCTACCACTGCGCGTTCTACAGCCCCCACCAC ACCCTCTTCGACGTCGCCGGCCGCCACTACTACGAGAGCTGTTACATCCAGGGCAACATC GACTTCATCTTCGGCGGCGGCCAGTCCATCTTCCAATGCCCGGAGATCTTCGTGAAGCCT GACCGGCGGACGGAGATCAAGGGCTCCATCACGGCGCAGAACCGCAAGCAGGAGGACGGC AGCGGCTTCGTCTTCATCAAGGGCAAGGTGTACGGCGTCGGGCAGGTGTACCTGGGCCGC GCCAACGAGGCCTACTCGCGCGTCATCTTCGCCGACACCTACCTCTCCAAGACCATCAAC CCGGCCGGCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAG TTCAACTGCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTC ACCCAGGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTC CCGGCGTACTACTACTGA

Peptide Sequence

PEP ID	Os03t0309400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:11033522:11035542:-1 gene:Os03g0309400 transcript:Os03t0309400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 1 description:Pectin lyase fold domain containing protein. (Os03t0309400-01)
Sequence	MARPRLLLLPLLAVAAAVLSSPLGRALAKTAKKSNDIVNGPLLTSKINAKRTLIVGPEDE FKTVQSAIDAVPVGNTEWVIVHLRSGIYREKVMIPETKPFIFVRGNGKGRTSINHESASS HNAESAAFTVHADNVIVFGLSIRNSARAGLPNVPEVRTVAAMVGGDKIAFYHCAFYSPHH TLFDVAGRHYYESCYIQGNIDFIFGGGQSIFQCPEIFVKPDRRTEIKGSITAQNRKQEDG SGFVFIKGKVYGVGQVYLGRANEAYSRVIFADTYLSKTINPAGWTSYGYTGSTDHVMLGE FNCTGPGSEATKREPWSRQLTQEEADKFINIDFINGKEWLPAYYY

Transcript Sequence

Transcript ID	Os03t0309400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:11033522:11035542:-1 gene:Os03g0309400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 1 description:Pectin lyase fold domain containing protein. (Os03t0309400-01)
Sequence	AGGAGAAACCAAACCAGTGGCTAAGCCATCTTCGATCGCAGAAACCCGCGGTGCGTAGCG ATGGCCCGGCCACGCCTCCTCCTCCTCCCTCTCCTCGCCGTCGCCGCGGCGGTGCTCTCG TCGCCGCTCGGCCGCGCGCTCGCCAAGACGGCCAAGAAGAGCAACGACATCGTCAATGGC CCACTGCTCACCTCCAAGATCAACGCCAAGCGCACGCTGATCGTCGGCCCCGAGGACGAG TTCAAGACCGTGCAGTCCGCCATCGACGCCGTGCCCGTCGGCAACACCGAGTGGGTCATC GTCCACCTCCGCTCCGGCATCTACAGGGAGAAAGTTATGATCCCGGAAACCAAGCCGTTC ATCTTCGTGAGGGGCAACGGCAAGGGCCGGACCTCAATCAACCACGAGTCCGCTTCCTCC CACAACGCCGAGTCTGCCGCCTTCACCGTGCACGCGGACAACGTCATCGTCTTCGGCCTC AGCATCAGGAACAGCGCGCGCGCCGGGCTGCCCAACGTCCCGGAGGTGCGCACGGTGGCC GCCATGGTCGGCGGCGACAAGATTGCCTTCTACCACTGCGCGTTCTACAGCCCCCACCAC ACCCTCTTCGACGTCGCCGGCCGCCACTACTACGAGAGCTGTTACATCCAGGGCAACATC GACTTCATCTTCGGCGGCGGCCAGTCCATCTTCCAATGCCCGGAGATCTTCGTGAAGCCT GACCGGCGGACGGAGATCAAGGGCTCCATCACGGCGCAGAACCGCAAGCAGGAGGACGGC AGCGGCTTCGTCTTCATCAAGGGCAAGGTGTACGGCGTCGGGCAGGTGTACCTGGGCCGC GCCAACGAGGCCTACTCGCGCGTCATCTTCGCCGACACCTACCTCTCCAAGACCATCAAC CCGGCCGGCTGGACCAGCTACGGCTACACCGGATCCACCGACCACGTGATGCTCGGGGAG TTCAACTGCACCGGGCCGGGCTCCGAAGCGACGAAGCGCGAGCCGTGGTCGCGGCAGCTC ACCCAGGAGGAGGCCGACAAGTTCATCAACATCGACTTCATCAACGGCAAGGAGTGGCTC CCGGCGTACTACTACTGATCATATCCAACCAAAAAGAGAAACGTAGTAACATGTATGTGC GTGTGCATGCATGCTCTGGGCCGGCTAGCCGTAACCATGGTGTCAAGAGTTCTAAACTTC TAATCGAAACGGAAGCGCACTGGAACGATTGGTGTCTTTGCAGTAGGAAGATGGCAGATT TAATTTGTTGATCATGAGCTCGAAATGAACTTGCGCATTTTATTGCTTACAAGTTAGAAC TGAGGCACATTGCTCGGTTTATGACTGTCCAGTGCATAGAACATCACATTTAATTTTCAT GTGTATATTATATGCCCTAAATATATTATTTCTGCTACTTTTAATTCGGTTCCT