Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0307200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:10926469:10927729:1 gene:Os03g0307200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NICOTIANAMINE SYNTHASE 2 description:Nicotianamine synthase 2, Nicotianamine biosynthesis (Os03t0307200-01)
Sequence

ATGGAGGCTCAGAACCAAGAGGTCGCTGCCCTGGTCGAGAAGATCGCCGGCCTCCACGCC
GCCATCTCCAAGCTGCCGTCGCTGAGCCCATCCGCCGAGGTGGACGCGCTCTTCACCGAC
CTCGTCACGGCGTGCGTCCCGGCGAGCCCCGTCGACGTGGCCAAGCTCGGCCCGGAGGCG
CAGGCGATGCGGGAGGAGCTCATCCGCCTCTGCTCCGCCGCCGAGGGCCACCTCGAGGCG
CACTACGCCGACATGCTCGCCGCCTTCGACAACCCGCTCGACCACCTCGCCCGCTTCCCG
TACTACGGCAACTACGTCAACCTGAGCAAGCTGGAGTACGACCTCCTCGTCCGCTACGTC
CCCGGCATTGCCCCCACCCGCGTCGCCTTCGTCGGGTCGGGCCCGCTGCCGTTCAGCTCC
CTCGTGCTCGCCGCGCACCACCTGCCGGACGCGGTGTTCGACAACTACGACCGGTGCGGC
GCGGCCAACGAGCGGGCGAGGAGGCTGTTCCGCGGCGCCGACGAGGGCCTCGGCGCGCGC
ATGGCGTTCCACACCGCCGACGTGGCGACCCTGACGGGGGAGCTCGGCGCGTACGACGTC
GTGTTCCTGGCGGCGCTCGTGGGCATGGCGGCCGAGGAGAAGGCCGGGGTGATCGCGCAC
CTGGGCGCGCACATGGCGGACGGCGCGGCGCTCGTCGTGCGGAGCGCGCACGGGGCGCGC
GGGTTCCTGTACCCGATCGTCGATCTCGAGGACATCCGGCGGGGCGGGTTCGACGTGCTG
GCCGTGTACCACCCCGACGACGAGGTGATCAACTCCGTCATCGTCGCTCGCAAGGCCGAC
CCGCGTCGCGGCGGCGGGCTCGCCGGCGCACGCGGCGCGGTTCCAGTGGTGAGCCCGCCG
TGCAAGTGCTGCAAGATGGAGGCGGCCGCCGGCGCGTTCCAGAAGGCGGAAGAGTTCGCC
GCCAAGAGGCTATCCGTCTGA

Peptide Sequence

PEP ID

Os03t0307200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:10926469:10927729:1 gene:Os03g0307200 transcript:Os03t0307200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NICOTIANAMINE SYNTHASE 2 description:Nicotianamine synthase 2, Nicotianamine biosynthesis (Os03t0307200-01)
Sequence

MEAQNQEVAALVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEA
QAMREELIRLCSAAEGHLEAHYADMLAAFDNPLDHLARFPYYGNYVNLSKLEYDLLVRYV
PGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGAR
MAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGAR
GFLYPIVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADPRRGGGLAGARGAVPVVSPP
CKCCKMEAAAGAFQKAEEFAAKRLSV

Transcript Sequence

Transcript ID

Os03t0307200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10926469:10927729:1 gene:Os03g0307200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NICOTIANAMINE SYNTHASE 2 description:Nicotianamine synthase 2, Nicotianamine biosynthesis (Os03t0307200-01)
Sequence

ATCAAGCAGCTCAAGCATTCCACAAGCTTGCCGTTTTCCACTGACAGCTCAAGTGCTCGT
GCAACATTAGCTGATCAGCTCGTGTTCCCAACCGCGACAAAGCTTCACAGATGGAGGCTC
AGAACCAAGAGGTCGCTGCCCTGGTCGAGAAGATCGCCGGCCTCCACGCCGCCATCTCCA
AGCTGCCGTCGCTGAGCCCATCCGCCGAGGTGGACGCGCTCTTCACCGACCTCGTCACGG
CGTGCGTCCCGGCGAGCCCCGTCGACGTGGCCAAGCTCGGCCCGGAGGCGCAGGCGATGC
GGGAGGAGCTCATCCGCCTCTGCTCCGCCGCCGAGGGCCACCTCGAGGCGCACTACGCCG
ACATGCTCGCCGCCTTCGACAACCCGCTCGACCACCTCGCCCGCTTCCCGTACTACGGCA
ACTACGTCAACCTGAGCAAGCTGGAGTACGACCTCCTCGTCCGCTACGTCCCCGGCATTG
CCCCCACCCGCGTCGCCTTCGTCGGGTCGGGCCCGCTGCCGTTCAGCTCCCTCGTGCTCG
CCGCGCACCACCTGCCGGACGCGGTGTTCGACAACTACGACCGGTGCGGCGCGGCCAACG
AGCGGGCGAGGAGGCTGTTCCGCGGCGCCGACGAGGGCCTCGGCGCGCGCATGGCGTTCC
ACACCGCCGACGTGGCGACCCTGACGGGGGAGCTCGGCGCGTACGACGTCGTGTTCCTGG
CGGCGCTCGTGGGCATGGCGGCCGAGGAGAAGGCCGGGGTGATCGCGCACCTGGGCGCGC
ACATGGCGGACGGCGCGGCGCTCGTCGTGCGGAGCGCGCACGGGGCGCGCGGGTTCCTGT
ACCCGATCGTCGATCTCGAGGACATCCGGCGGGGCGGGTTCGACGTGCTGGCCGTGTACC
ACCCCGACGACGAGGTGATCAACTCCGTCATCGTCGCTCGCAAGGCCGACCCGCGTCGCG
GCGGCGGGCTCGCCGGCGCACGCGGCGCGGTTCCAGTGGTGAGCCCGCCGTGCAAGTGCT
GCAAGATGGAGGCGGCCGCCGGCGCGTTCCAGAAGGCGGAAGAGTTCGCCGCCAAGAGGC
TATCCGTCTGAGTGCGTGCATAGTAATCCTGGCTGTGTCTCGCTGTCCGTGACATCGGCC
GGCTGAAACATTATTGGTATCGGTTTGTGTTTGTGCTTCTGTGGGGTTCTTGTTCTTGTT
GTGTGGATGATGCTAGGCGCCTGGGCATTGATCCGTGCCAATGCATTCCGTGTTTCGGTG
C