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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0306800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:10910568:10911189:1 gene:Os03g0306800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast protein 12, Calvin cycle protein CP12 description:Similar to CP12 (Fragment). (Os03t0306800-01)
Sequence

ATGGCAACCATCCTCGCCGTGGCCGCCATGGCCACCTTCCAGGCTCCGACGACCCTCCCG
GGGCCCCTGGCTCCTACGCTACCGGTTCGCCGGAACGTCGTGTCGTTCGCCGGCCGCCGG
CAGGGGCGCGCGCTGGGAAGGCTGGCGGTGGTGGTCGCGGCGGGCTCGCCGACGCCGCCG
GAGCTGGCGCAGAAGGTGTCGGAGAGCATCAAGCAGGCGGAGGAGACGTGCGCGGGCGAC
CCGGAGGGCGGCGAGTGCGCGGCGGCGTGGGACGAGGTGGAGGAGCTCAGCGCCGCCGCC
AGCCACGCGCGCGACCGCAAGAAGGACAGCGACCCGCTCGAGGAGTACTGCAAGGACAAC
CCGGAGACCGACGAGTGCCGCACCTACGAAGACTGA

Peptide Sequence

PEP ID

Os03t0306800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:10910568:10911189:1 gene:Os03g0306800 transcript:Os03t0306800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast protein 12, Calvin cycle protein CP12 description:Similar to CP12 (Fragment). (Os03t0306800-01)
Sequence

MATILAVAAMATFQAPTTLPGPLAPTLPVRRNVVSFAGRRQGRALGRLAVVVAAGSPTPP
ELAQKVSESIKQAEETCAGDPEGGECAAAWDEVEELSAAASHARDRKKDSDPLEEYCKDN
PETDECRTYED

Transcript Sequence

Transcript ID

Os03t0306800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10910568:10911189:1 gene:Os03g0306800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast protein 12, Calvin cycle protein CP12 description:Similar to CP12 (Fragment). (Os03t0306800-01)
Sequence

CCTCACTGCAACACTCTTCGGGGTGCAGGCAGCCAGAGCCATGGCAACCATCCTCGCCGT
GGCCGCCATGGCCACCTTCCAGGCTCCGACGACCCTCCCGGGGCCCCTGGCTCCTACGCT
ACCGGTTCGCCGGAACGTCGTGTCGTTCGCCGGCCGCCGGCAGGGGCGCGCGCTGGGAAG
GCTGGCGGTGGTGGTCGCGGCGGGCTCGCCGACGCCGCCGGAGCTGGCGCAGAAGGTGTC
GGAGAGCATCAAGCAGGCGGAGGAGACGTGCGCGGGCGACCCGGAGGGCGGCGAGTGCGC
GGCGGCGTGGGACGAGGTGGAGGAGCTCAGCGCCGCCGCCAGCCACGCGCGCGACCGCAA
GAAGGACAGCGACCCGCTCGAGGAGTACTGCAAGGACAACCCGGAGACCGACGAGTGCCG
CACCTACGAAGACTGAGCCCACACGAGCGCCACCAGTTCATCCATGGCTTTCGCCATTGC
TGTTACTGTGTTACACATTTCAGCTCTAAGCAAGCTAGAGCAGCATGGCATACTGGGGTG
TACACTTTGCCTCTTGGGCGTGTAAGTTTGATCGTTAATTTGTCTTAGTTTGCAATAATG
CGAGGTTTTTTATTTGTTAATT