Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0305400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:10839459:10840785:-1 gene:Os03g0305400 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os03t0305400-01)
Sequence

ATGGACCGCGCGACGGAGGAGGAGACGGCGGCGACGGGGCGGCGGATACTGGTGGCCGTG
GACGAGGGCGACGAGAGCGTCCACGCGCTCAAGTGGTGCCTCGCCAGCTTCGCCAAGCGC
GGCGGCGGCGGGGGCGCGGCGCCGCCGGACACCATCATCCTGCTCTACGTCCGGCCGCCG
CCGCCCACCTACTCCGTGCTCGACGCCTCCGGCTACGTGTTCTCCGACGAGGTGGCCGCC
GCCATTGACGGGTACAGCAAGGAGGTGGCGGAGGCGGTGGTGGAGAAGGCGCAGAAGCTC
TGCACGCTCTACGGCAAGGAGGTCGGTGGCGACGGTGAGGCTGGCCATGAGATGAAGGTG
GAGGTGAAGGTGGCGGTCGGCGACGCCAGGAACGTCATCTGCCAGATGGCGGACAAGCTC
GGCGCCGACGTGCTGGTGATGGGGAGCCATGGCTATGGCCTGTTCAAGAGGGCTCTGCTT
GGAAGTGTCAGTGATTACTGCGTCAGGAACGCCAACTGTCCAGTTCTCATCGTCAAGTCG
TAG

Peptide Sequence

PEP ID

Os03t0305400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:10839459:10840785:-1 gene:Os03g0305400 transcript:Os03t0305400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os03t0305400-01)
Sequence

MDRATEEETAATGRRILVAVDEGDESVHALKWCLASFAKRGGGGGAAPPDTIILLYVRPP
PPTYSVLDASGYVFSDEVAAAIDGYSKEVAEAVVEKAQKLCTLYGKEVGGDGEAGHEMKV
EVKVAVGDARNVICQMADKLGADVLVMGSHGYGLFKRALLGSVSDYCVRNANCPVLIVKS

Transcript Sequence

Transcript ID

Os03t0305400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:10839459:10840785:-1 gene:Os03g0305400 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os03t0305400-01)
Sequence

ATCCGAACGTTCGAGCGGTGAGGCACAGTCTTGTGACAGGAGAGAGAAGAGAGGAGTTGG
TTAGTGCTACGCTGCGACGGATGGACCGCGCGACGGAGGAGGAGACGGCGGCGACGGGGC
GGCGGATACTGGTGGCCGTGGACGAGGGCGACGAGAGCGTCCACGCGCTCAAGTGGTGCC
TCGCCAGCTTCGCCAAGCGCGGCGGCGGCGGGGGCGCGGCGCCGCCGGACACCATCATCC
TGCTCTACGTCCGGCCGCCGCCGCCCACCTACTCCGTGCTCGACGCCTCCGGCTACGTGT
TCTCCGACGAGGTGGCCGCCGCCATTGACGGGTACAGCAAGGAGGTGGCGGAGGCGGTGG
TGGAGAAGGCGCAGAAGCTCTGCACGCTCTACGGCAAGGAGGTCGGTGGCGACGGTGAGG
CTGGCCATGAGATGAAGGTGGAGGTGAAGGTGGCGGTCGGCGACGCCAGGAACGTCATCT
GCCAGATGGCGGACAAGCTCGGCGCCGACGTGCTGGTGATGGGGAGCCATGGCTATGGCC
TGTTCAAGAGGGCTCTGCTTGGAAGTGTCAGTGATTACTGCGTCAGGAACGCCAACTGTC
CAGTTCTCATCGTCAAGTCGTAGCTGCCACTCACTCCAGTGCTTGTAACTGTGCAGCAGC
ATGTGTGCTCTGTCCGGCTTTTTTTTTTGTTTTTGCCTTGTGTTCTGCTTTGTATGTCTA
CTTTAGTTCGCTTCGCATGTAATCTGCCGGAAGAGGACGTGCTGAGTGATTACTCAGAAC
TCTGAAGTTATCCAGCAACCTGTATATAGAAGAACTACTTTCTGTGGAGATGGCAAATTT
AGTTTTTCTGTCATCGGCTTCCACTTTTAGCACTGATTTCTGAATTTGGCTGTATAATTA
GCAAATACCCAGGGTTTGCTTTGATCTATTCGCGCTAACCATTGCGCAGAAATTCAGAAC
TCCTTTATAAACAAATCTCTAAGAGAGAGAATTACTAGCG